data_8HNH # _model_server_result.job_id pNVt8aY8371nkIJNMsNDdA _model_server_result.datetime_utc '2024-11-05 08:10:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hnh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 8HNH # _exptl.entry_id 8HNH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 749.939 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R,3aR,10Z,11aS,12aR,14aR)-N-(cyclopropylsulfonyl)-2-({7-methoxy-8-methyl-2-[4-(1-methylethyl)-1,3-thiazol-2-yl]quinolin-4-yl}oxy)-5-methyl-4,14-dioxo-2,3,3a,4,5,6,7,8,9,11a,12,13,14,14a-tetradecahydrocyclopenta[c]cyclopropa[g][1,6]diazacyclotetradecine-12a(1H)-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG A 1179 NAG 2 n B NAG 2 B 2 NAG A 1180 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 142 A CYS 142 1_555 A SG CYS 463 A CYS 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 430 A CYS 430 1_555 A SG CYS 530 A CYS 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 A SG CYS 459 A CYS 459 1_555 A SG CYS 506 A CYS 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 A SG CYS 465 A CYS 465 1_555 A SG CYS 485 A CYS 485 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 A SG CYS 474 A CYS 474 1_555 A SG CYS 524 A CYS 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf6 A SG CYS 489 A CYS 489 1_555 A SG CYS 504 A CYS 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 A SG CYS 599 A CYS 599 1_555 A SG CYS 613 A CYS 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? covale ? covale1 A ND2 ASN 503 A ASN 503 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.563 ? covale ? covale2 A ND2 ASN 516 A ASN 516 1_555 D C1 NAG . A NAG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale3 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.52 ? # _chem_comp.formula 'C38 H47 N5 O7 S2' _chem_comp.formula_weight 749.939 _chem_comp.id 30B _chem_comp.mon_nstd_flag . _chem_comp.name (2R,3aR,10Z,11aS,12aR,14aR)-N-(cyclopropylsulfonyl)-2-({7-methoxy-8-methyl-2-[4-(1-methylethyl)-1,3-thiazol-2-yl]quinolin-4-yl}oxy)-5-methyl-4,14-dioxo-2,3,3a,4,5,6,7,8,9,11a,12,13,14,14a-tetradecahydrocyclopenta[c]cyclopropa[g][1,6]diazacyclotetradecine-12a(1H)-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 30B sing 1 n n C1 C5 30B sing 2 n n C2 C3 30B sing 3 n n C2 C9 30B sing 4 n n C3 C4 30B sing 5 n n C3 C6 30B sing 6 n n C4 C5 30B sing 7 n n C5 O23 30B sing 8 n n C6 O7 30B doub 9 n n C6 N8 30B sing 10 n n N8 C16 30B sing 11 n n C9 O10 30B doub 12 n n C9 N13 30B sing 13 n n C11 C16 30B sing 14 n n C11 C17 30B sing 15 n n C11 C18 30B sing 16 n n C12 C16 30B sing 17 n n C12 N45 30B sing 18 n n C12 O46 30B doub 19 n n N13 C14 30B sing 20 n n N13 C15 30B sing 21 n n C14 C19 30B sing 22 n n C16 C17 30B sing 23 n n C18 C22 30B doub 24 n n C19 C20 30B sing 25 n n C20 C21 30B sing 26 n n C21 C22 30B sing 27 n n O23 C30 30B sing 28 n n C24 C25 30B doub 29 n y C24 C29 30B sing 30 n y C24 O42 30B sing 31 n n C25 C26 30B sing 32 n y C26 C27 30B doub 33 n y C27 C28 30B sing 34 n y C27 C30 30B sing 35 n y C28 C29 30B doub 36 n y C28 N33 30B sing 37 n y C29 C44 30B sing 38 n n C30 C31 30B doub 39 n y C31 C32 30B sing 40 z y C32 N33 30B doub 41 n y C32 C34 30B sing 42 n y C34 S35 30B sing 43 n y C34 N38 30B doub 44 n y S35 C36 30B sing 45 n y C36 C37 30B doub 46 n y C37 N38 30B sing 47 n y C37 C39 30B sing 48 n n C39 C40 30B sing 49 n n C39 C41 30B sing 50 n n O42 C43 30B sing 51 n n N45 S47 30B sing 52 n n S47 C48 30B sing 53 n n S47 O49 30B doub 54 n n S47 O50 30B doub 55 n n C48 C51 30B sing 56 n n C48 C52 30B sing 57 n n C51 C52 30B sing 58 n n C1 H1 30B sing 59 n n C1 H1A 30B sing 60 n n C2 H2 30B sing 61 n n C3 H3 30B sing 62 n n C4 H4 30B sing 63 n n C4 H4A 30B sing 64 n n C5 H5 30B sing 65 n n N8 HN8 30B sing 66 n n C11 H11 30B sing 67 n n C14 H14 30B sing 68 n n C14 H14A 30B sing 69 n n C15 H15 30B sing 70 n n C15 H15A 30B sing 71 n n C15 H15B 30B sing 72 n n C17 H17 30B sing 73 n n C17 H17A 30B sing 74 n n C18 H18 30B sing 75 n n C19 H19 30B sing 76 n n C19 H19A 30B sing 77 n n C20 H20 30B sing 78 n n C20 H20A 30B sing 79 n n C21 H21 30B sing 80 n n C21 H21A 30B sing 81 n n C22 H22 30B sing 82 n n C25 H25 30B sing 83 n n C26 H26 30B sing 84 n n C31 H31 30B sing 85 n n C36 H36 30B sing 86 n n C39 H39 30B sing 87 n n C40 H40 30B sing 88 n n C40 H40A 30B sing 89 n n C40 H40B 30B sing 90 n n C41 H41 30B sing 91 n n C41 H41A 30B sing 92 n n C41 H41B 30B sing 93 n n C43 H43 30B sing 94 n n C43 H43A 30B sing 95 n n C43 H43B 30B sing 96 n n C44 H44 30B sing 97 n n C44 H44A 30B sing 98 n n C44 H44B 30B sing 99 n n N45 HN45 30B sing 100 n n C48 H48 30B sing 101 n n C51 H51 30B sing 102 n n C51 H51A 30B sing 103 n n C52 H52 30B sing 104 n n C52 H52A 30B sing 105 n n # _atom_sites.entry_id 8HNH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 30B A 1 801 701 30B 30B . D 4 NAG A 1 802 1181 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 30B . . . C 3 105.874 112.981 105.584 1 121.13 ? C1 30B 801 A 1 HETATM 2 C C2 30B . . . C 3 105.897 113.531 107.021 1 121.13 ? C2 30B 801 A 1 HETATM 3 C C3 30B . . . C 3 107.065 112.826 107.675 1 121.13 ? C3 30B 801 A 1 HETATM 4 C C4 30B . . . C 3 108.026 112.381 106.596 1 121.13 ? C4 30B 801 A 1 HETATM 5 C C5 30B . . . C 3 107.103 112.08 105.435 1 121.13 ? C5 30B 801 A 1 HETATM 6 C C6 30B . . . C 3 107.786 113.539 108.776 1 121.13 ? C6 30B 801 A 1 HETATM 7 O O7 30B . . . C 3 108.146 114.664 108.715 1 121.13 ? O7 30B 801 A 1 HETATM 8 N N8 30B . . . C 3 108.092 112.766 109.872 1 121.13 ? N8 30B 801 A 1 HETATM 9 C C9 30B . . . C 3 104.664 113.144 107.781 1 121.13 ? C9 30B 801 A 1 HETATM 10 O O10 30B . . . C 3 104.268 112.028 107.731 1 121.13 ? O10 30B 801 A 1 HETATM 11 C C11 30B . . . C 3 107.758 112.038 112.252 1 121.13 ? C11 30B 801 A 1 HETATM 12 C C12 30B . . . C 3 108.102 114.548 111.685 1 121.13 ? C12 30B 801 A 1 HETATM 13 N N13 30B . . . C 3 103.941 114.165 108.59 1 121.13 ? N13 30B 801 A 1 HETATM 14 C C14 30B . . . C 3 102.714 113.826 109.34 1 121.13 ? C14 30B 801 A 1 HETATM 15 C C15 30B . . . C 3 104.45 115.532 108.63 1 121.13 ? C15 30B 801 A 1 HETATM 16 C C16 30B . . . C 3 108.352 113.125 111.302 1 121.13 ? C16 30B 801 A 1 HETATM 17 C C17 30B . . . C 3 109.282 112.31 112.237 1 121.13 ? C17 30B 801 A 1 HETATM 18 C C18 30B . . . C 3 106.907 112.661 113.248 1 121.13 ? C18 30B 801 A 1 HETATM 19 C C19 30B . . . C 3 103.003 112.833 110.505 1 121.13 ? C19 30B 801 A 1 HETATM 20 C C20 30B . . . C 3 104.026 113.432 111.513 1 121.13 ? C20 30B 801 A 1 HETATM 21 C C21 30B . . . C 3 105.011 112.305 111.695 1 121.13 ? C21 30B 801 A 1 HETATM 22 C C22 30B . . . C 3 105.619 112.745 112.965 1 121.13 ? C22 30B 801 A 1 HETATM 23 O O23 30B . . . C 3 106.793 110.687 105.386 1 121.13 ? O23 30B 801 A 1 HETATM 24 C C24 30B . . . C 3 106.759 108.146 109.85 1 121.13 ? C24 30B 801 A 1 HETATM 25 C C25 30B . . . C 3 105.858 108.979 109.208 1 121.13 ? C25 30B 801 A 1 HETATM 26 C C26 30B . . . C 3 106.146 109.522 107.965 1 121.13 ? C26 30B 801 A 1 HETATM 27 C C27 30B . . . C 3 107.35 109.285 107.322 1 121.13 ? C27 30B 801 A 1 HETATM 28 C C28 30B . . . C 3 108.36 108.427 107.951 1 121.13 ? C28 30B 801 A 1 HETATM 29 C C29 30B . . . C 3 108.055 107.84 109.25 1 121.13 ? C29 30B 801 A 1 HETATM 30 C C30 30B . . . C 3 107.677 109.857 106.013 1 121.13 ? C30 30B 801 A 1 HETATM 31 C C31 30B . . . C 3 108.922 109.542 105.494 1 121.13 ? C31 30B 801 A 1 HETATM 32 C C32 30B . . . C 3 109.827 108.715 106.175 1 121.13 ? C32 30B 801 A 1 HETATM 33 N N33 30B . . . C 3 109.524 108.167 107.358 1 121.13 ? N33 30B 801 A 1 HETATM 34 C C34 30B . . . C 3 111.143 108.274 105.637 1 121.13 ? C34 30B 801 A 1 HETATM 35 S S35 30B . . . C 3 111.947 109.204 104.4 1 121.13 ? S35 30B 801 A 1 HETATM 36 C C36 30B . . . C 3 113.248 108.071 104.255 1 121.13 ? C36 30B 801 A 1 HETATM 37 C C37 30B . . . C 3 113.002 107.023 105.117 1 121.13 ? C37 30B 801 A 1 HETATM 38 N N38 30B . . . C 3 111.855 107.128 105.863 1 121.13 ? N38 30B 801 A 1 HETATM 39 C C39 30B . . . C 3 113.823 105.794 105.377 1 121.13 ? C39 30B 801 A 1 HETATM 40 C C40 30B . . . C 3 113.308 105.028 106.587 1 121.13 ? C40 30B 801 A 1 HETATM 41 C C41 30B . . . C 3 113.975 104.847 104.168 1 121.13 ? C41 30B 801 A 1 HETATM 42 O O42 30B . . . C 3 106.458 107.624 111.053 1 121.13 ? O42 30B 801 A 1 HETATM 43 C C43 30B . . . C 3 105.783 108.493 111.93 1 121.13 ? C43 30B 801 A 1 HETATM 44 C C44 30B . . . C 3 109.038 106.955 109.914 1 121.13 ? C44 30B 801 A 1 HETATM 45 N N45 30B . . . C 3 106.901 115.083 111.39 1 121.13 ? N45 30B 801 A 1 HETATM 46 O O46 30B . . . C 3 109.055 115.128 112.176 1 121.13 ? O46 30B 801 A 1 HETATM 47 S S47 30B . . . C 3 106.736 116.703 111.728 1 121.13 ? S47 30B 801 A 1 HETATM 48 C C48 30B . . . C 3 107.715 117.861 110.894 1 121.13 ? C48 30B 801 A 1 HETATM 49 O O49 30B . . . C 3 105.355 117.045 111.514 1 121.13 ? O49 30B 801 A 1 HETATM 50 O O50 30B . . . C 3 107.273 116.754 113.057 1 121.13 ? O50 30B 801 A 1 HETATM 51 C C51 30B . . . C 3 107.798 119.315 111.385 1 121.13 ? C51 30B 801 A 1 HETATM 52 C C52 30B . . . C 3 106.999 118.978 110.119 1 121.13 ? C52 30B 801 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 52 #