data_8HNN # _model_server_result.job_id 0QqanXHBuKxvAHjeC_3l2g _model_server_result.datetime_utc '2024-12-23 05:44:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hnn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8HNN # _exptl.entry_id 8HNN _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 492.445 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-azanyl-6-chloranyl-5-[(3S)-4-[1-[(4-chlorophenyl)methyl]piperidin-4-yl]-3-ethyl-piperazin-1-yl]pyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HNN _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HNN _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 62 N CYS 24 1_555 A SG CYS 135 N CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 262 R CYS 124 1_555 B SG CYS 341 R CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C23 H31 Cl2 N7 O' _chem_comp.formula_weight 492.445 _chem_comp.id 43I _chem_comp.mon_nstd_flag . _chem_comp.name 3-azanyl-6-chloranyl-5-[(3S)-4-[1-[(4-chlorophenyl)methyl]piperidin-4-yl]-3-ethyl-piperazin-1-yl]pyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 43I sing 1 n n C2 C3 43I sing 2 n n C3 N2 43I sing 3 n n C3 C4 43I sing 4 n n C10 C11 43I sing 5 n n C10 N3 43I sing 6 n n C11 C7 43I sing 7 n n N2 C7 43I sing 8 n n N2 C6 43I sing 9 n n C7 C8 43I sing 10 n n C18 C17 43I doub 11 n y C18 C13 43I sing 12 n y C17 C16 43I sing 13 n y C12 N3 43I sing 14 n n C12 C13 43I sing 15 n n N3 C9 43I sing 16 n n C4 N1 43I sing 17 n n C9 C8 43I sing 18 n n C5 N1 43I sing 19 n n C5 C6 43I sing 20 n n N1 C19 43I sing 21 n n C13 C14 43I doub 22 n y C19 N4 43I doub 23 n y C19 C22 43I sing 24 n y N4 C20 43I sing 25 n y CL2 C22 43I sing 26 n n C22 N5 43I doub 27 n y C20 N7 43I sing 28 n n C20 C21 43I doub 29 n y N5 C21 43I sing 30 n y C21 C23 43I sing 31 n n C16 CL1 43I sing 32 n n C16 C15 43I doub 33 n y C23 O1 43I doub 34 n n C23 N6 43I sing 35 n n C14 C15 43I sing 36 n y C1 H1 43I sing 37 n n C1 H2 43I sing 38 n n C1 H3 43I sing 39 n n C10 H4 43I sing 40 n n C10 H5 43I sing 41 n n C11 H6 43I sing 42 n n C11 H7 43I sing 43 n n C12 H8 43I sing 44 n n C12 H9 43I sing 45 n n C14 H10 43I sing 46 n n C15 H11 43I sing 47 n n C17 H12 43I sing 48 n n C18 H13 43I sing 49 n n C2 H14 43I sing 50 n n C2 H15 43I sing 51 n n C3 H16 43I sing 52 n n C4 H17 43I sing 53 n n C4 H18 43I sing 54 n n C5 H19 43I sing 55 n n C5 H20 43I sing 56 n n C6 H21 43I sing 57 n n C6 H22 43I sing 58 n n C7 H23 43I sing 59 n n C8 H24 43I sing 60 n n C8 H25 43I sing 61 n n C9 H26 43I sing 62 n n C9 H27 43I sing 63 n n N6 H30 43I sing 64 n n N6 H31 43I sing 65 n n N7 H32 43I sing 66 n n N7 H33 43I sing 67 n n # _atom_sites.entry_id 8HNN _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 43I R 1 401 405 43I SCH . D 4 CLR R 1 402 406 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 43I . . . C 3 112.325 123.207 112.237 1 61.98 ? C1 43I 401 R 1 HETATM 2 C C10 43I . . . C 3 111.891 121.864 117.322 1 61.98 ? C10 43I 401 R 1 HETATM 3 C C11 43I . . . C 3 112.548 121.157 116.189 1 61.98 ? C11 43I 401 R 1 HETATM 4 C C12 43I . . . C 3 112.178 123.056 119.329 1 61.98 ? C12 43I 401 R 1 HETATM 5 C C13 43I . . . C 3 112.861 122.874 120.657 1 61.98 ? C13 43I 401 R 1 HETATM 6 C C14 43I . . . C 3 112.126 122.893 121.823 1 61.98 ? C14 43I 401 R 1 HETATM 7 C C15 43I . . . C 3 112.729 122.744 123.032 1 61.98 ? C15 43I 401 R 1 HETATM 8 C C16 43I . . . C 3 114.081 122.587 123.079 1 61.98 ? C16 43I 401 R 1 HETATM 9 C C17 43I . . . C 3 114.846 122.565 121.95 1 61.98 ? C17 43I 401 R 1 HETATM 10 C C18 43I . . . C 3 114.228 122.708 120.74 1 61.98 ? C18 43I 401 R 1 HETATM 11 C C19 43I . . . C 3 114.01 119.509 110.671 1 61.98 ? C19 43I 401 R 1 HETATM 12 C C2 43I . . . C 3 111.855 121.773 112.402 1 61.98 ? C2 43I 401 R 1 HETATM 13 C C20 43I . . . C 3 114.95 119.093 108.623 1 61.98 ? C20 43I 401 R 1 HETATM 14 C C21 43I . . . C 3 113.717 118.578 108.173 1 61.98 ? C21 43I 401 R 1 HETATM 15 C C22 43I . . . C 3 112.81 118.995 110.227 1 61.98 ? C22 43I 401 R 1 HETATM 16 C C23 43I . . . C 3 113.526 118.049 106.782 1 61.98 ? C23 43I 401 R 1 HETATM 17 C C3 43I . . . C 3 112.579 120.969 113.49 1 61.98 ? C3 43I 401 R 1 HETATM 18 C C4 43I . . . C 3 113.091 119.664 112.937 1 61.98 ? C4 43I 401 R 1 HETATM 19 C C5 43I . . . C 3 115.213 120.748 112.453 1 61.98 ? C5 43I 401 R 1 HETATM 20 C C6 43I . . . C 3 114.975 121.04 113.913 1 61.98 ? C6 43I 401 R 1 HETATM 21 C C7 43I . . . C 3 113.391 122.148 115.425 1 61.98 ? C7 43I 401 R 1 HETATM 22 C C8 43I . . . C 3 114.404 122.767 116.361 1 61.98 ? C8 43I 401 R 1 HETATM 23 C C9 43I . . . C 3 113.682 123.416 117.502 1 61.98 ? C9 43I 401 R 1 HETATM 24 N N1 43I . . . C 3 114.113 119.95 111.939 1 61.98 ? N1 43I 401 R 1 HETATM 25 N N2 43I . . . C 3 113.709 121.723 114.069 1 61.98 ? N2 43I 401 R 1 HETATM 26 N N3 43I . . . C 3 112.882 122.434 118.216 1 61.98 ? N3 43I 401 R 1 HETATM 27 N N4 43I . . . C 3 115.081 119.559 109.871 1 61.98 ? N4 43I 401 R 1 HETATM 28 N N5 43I . . . C 3 112.661 118.54 109.003 1 61.98 ? N5 43I 401 R 1 HETATM 29 N N6 43I . . . C 3 112.379 117.443 106.548 1 61.98 ? N6 43I 401 R 1 HETATM 30 N N7 43I . . . C 3 115.994 119.134 107.81 1 61.98 ? N7 43I 401 R 1 HETATM 31 O O1 43I . . . C 3 114.414 118.174 105.932 1 61.98 ? O1 43I 401 R 1 HETATM 32 CL CL1 43I . . . C 3 114.842 122.395 124.617 1 61.98 ? CL1 43I 401 R 1 HETATM 33 CL CL2 43I . . . C 3 111.45 118.945 111.295 1 61.98 ? CL2 43I 401 R 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 33 #