data_8HOA # _model_server_result.job_id SnKgO_miugM5maJ9lZPLEA _model_server_result.datetime_utc '2024-10-11 15:19:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hoa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 8HOA # _exptl.entry_id 8HOA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HOA _cell.length_a 42.66 _cell.length_b 82.35 _cell.length_c 98.45 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HOA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 70 n n PG O2G ATP sing 71 n n PG O3G ATP sing 72 n n PG O3B ATP sing 73 n n O2G HOG2 ATP sing 74 n n O3G HOG3 ATP sing 75 n n PB O1B ATP doub 76 n n PB O2B ATP sing 77 n n PB O3B ATP sing 78 n n PB O3A ATP sing 79 n n O2B HOB2 ATP sing 80 n n PA O1A ATP doub 81 n n PA O2A ATP sing 82 n n PA O3A ATP sing 83 n n PA O5' ATP sing 84 n n O2A HOA2 ATP sing 85 n n O5' C5' ATP sing 86 n n C5' C4' ATP sing 87 n n C5' "H5'1" ATP sing 88 n n C5' "H5'2" ATP sing 89 n n C4' O4' ATP sing 90 n n C4' C3' ATP sing 91 n n C4' H4' ATP sing 92 n n O4' C1' ATP sing 93 n n C3' O3' ATP sing 94 n n C3' C2' ATP sing 95 n n C3' H3' ATP sing 96 n n O3' HO3' ATP sing 97 n n C2' O2' ATP sing 98 n n C2' C1' ATP sing 99 n n C2' H2' ATP sing 100 n n O2' HO2' ATP sing 101 n n C1' N9 ATP sing 102 n n C1' H1' ATP sing 103 n n N9 C8 ATP sing 104 n y N9 C4 ATP sing 105 n y C8 N7 ATP doub 106 n y C8 H8 ATP sing 107 n n N7 C5 ATP sing 108 n y C5 C6 ATP sing 109 n y C5 C4 ATP doub 110 n y C6 N6 ATP sing 111 n n C6 N1 ATP doub 112 n y N6 HN61 ATP sing 113 n n N6 HN62 ATP sing 114 n n N1 C2 ATP sing 115 n y C2 N3 ATP doub 116 n y C2 H2 ATP sing 117 n n N3 C4 ATP sing 118 n y # _atom_sites.entry_id 8HOA _atom_sites.fract_transf_matrix[1][1] 0.023441 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010157 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 701 701 ATP ATP . C 3 HX2 A 1 702 901 HX2 HX2 . D 4 FMT A 1 703 1301 FMT FMT . E 4 FMT A 1 704 1401 FMT FMT . F 4 FMT A 1 705 1801 FMT FMT . G 4 FMT A 1 706 1901 FMT FMT . H 5 HOH A 1 801 1 HOH HOH . H 5 HOH A 2 802 3 HOH HOH . H 5 HOH A 3 803 63 HOH HOH . H 5 HOH A 4 804 4 HOH HOH . H 5 HOH A 5 805 244 HOH HOH . H 5 HOH A 6 806 189 HOH HOH . H 5 HOH A 7 807 51 HOH HOH . H 5 HOH A 8 808 220 HOH HOH . H 5 HOH A 9 809 76 HOH HOH . H 5 HOH A 10 810 40 HOH HOH . H 5 HOH A 11 811 81 HOH HOH . H 5 HOH A 12 812 182 HOH HOH . H 5 HOH A 13 813 29 HOH HOH . H 5 HOH A 14 814 120 HOH HOH . H 5 HOH A 15 815 186 HOH HOH . H 5 HOH A 16 816 178 HOH HOH . H 5 HOH A 17 817 127 HOH HOH . H 5 HOH A 18 818 117 HOH HOH . H 5 HOH A 19 819 206 HOH HOH . H 5 HOH A 20 820 52 HOH HOH . H 5 HOH A 21 821 159 HOH HOH . H 5 HOH A 22 822 10 HOH HOH . H 5 HOH A 23 823 110 HOH HOH . H 5 HOH A 24 824 61 HOH HOH . H 5 HOH A 25 825 122 HOH HOH . H 5 HOH A 26 826 193 HOH HOH . H 5 HOH A 27 827 111 HOH HOH . H 5 HOH A 28 828 204 HOH HOH . H 5 HOH A 29 829 93 HOH HOH . H 5 HOH A 30 830 142 HOH HOH . H 5 HOH A 31 831 121 HOH HOH . H 5 HOH A 32 832 148 HOH HOH . H 5 HOH A 33 833 165 HOH HOH . H 5 HOH A 34 834 53 HOH HOH . H 5 HOH A 35 835 225 HOH HOH . H 5 HOH A 36 836 252 HOH HOH . H 5 HOH A 37 837 6 HOH HOH . H 5 HOH A 38 838 115 HOH HOH . H 5 HOH A 39 839 97 HOH HOH . H 5 HOH A 40 840 201 HOH HOH . H 5 HOH A 41 841 68 HOH HOH . H 5 HOH A 42 842 125 HOH HOH . H 5 HOH A 43 843 103 HOH HOH . H 5 HOH A 44 844 95 HOH HOH . H 5 HOH A 45 845 80 HOH HOH . H 5 HOH A 46 846 138 HOH HOH . H 5 HOH A 47 847 5 HOH HOH . H 5 HOH A 48 848 94 HOH HOH . H 5 HOH A 49 849 20 HOH HOH . H 5 HOH A 50 850 133 HOH HOH . H 5 HOH A 51 851 134 HOH HOH . H 5 HOH A 52 852 42 HOH HOH . H 5 HOH A 53 853 64 HOH HOH . H 5 HOH A 54 854 132 HOH HOH . H 5 HOH A 55 855 8 HOH HOH . H 5 HOH A 56 856 45 HOH HOH . H 5 HOH A 57 857 23 HOH HOH . H 5 HOH A 58 858 39 HOH HOH . H 5 HOH A 59 859 191 HOH HOH . H 5 HOH A 60 860 37 HOH HOH . H 5 HOH A 61 861 190 HOH HOH . H 5 HOH A 62 862 79 HOH HOH . H 5 HOH A 63 863 74 HOH HOH . H 5 HOH A 64 864 28 HOH HOH . H 5 HOH A 65 865 92 HOH HOH . H 5 HOH A 66 866 158 HOH HOH . H 5 HOH A 67 867 16 HOH HOH . H 5 HOH A 68 868 55 HOH HOH . H 5 HOH A 69 869 181 HOH HOH . H 5 HOH A 70 870 24 HOH HOH . H 5 HOH A 71 871 75 HOH HOH . H 5 HOH A 72 872 19 HOH HOH . H 5 HOH A 73 873 131 HOH HOH . H 5 HOH A 74 874 7 HOH HOH . H 5 HOH A 75 875 17 HOH HOH . H 5 HOH A 76 876 41 HOH HOH . H 5 HOH A 77 877 116 HOH HOH . H 5 HOH A 78 878 30 HOH HOH . H 5 HOH A 79 879 87 HOH HOH . H 5 HOH A 80 880 69 HOH HOH . H 5 HOH A 81 881 58 HOH HOH . H 5 HOH A 82 882 174 HOH HOH . H 5 HOH A 83 883 105 HOH HOH . H 5 HOH A 84 884 118 HOH HOH . H 5 HOH A 85 885 22 HOH HOH . H 5 HOH A 86 886 119 HOH HOH . H 5 HOH A 87 887 160 HOH HOH . H 5 HOH A 88 888 169 HOH HOH . H 5 HOH A 89 889 239 HOH HOH . H 5 HOH A 90 890 25 HOH HOH . H 5 HOH A 91 891 47 HOH HOH . H 5 HOH A 92 892 129 HOH HOH . H 5 HOH A 93 893 203 HOH HOH . H 5 HOH A 94 894 70 HOH HOH . H 5 HOH A 95 895 176 HOH HOH . H 5 HOH A 96 896 180 HOH HOH . H 5 HOH A 97 897 65 HOH HOH . H 5 HOH A 98 898 44 HOH HOH . H 5 HOH A 99 899 12 HOH HOH . H 5 HOH A 100 900 200 HOH HOH . H 5 HOH A 101 901 183 HOH HOH . H 5 HOH A 102 902 107 HOH HOH . H 5 HOH A 103 903 157 HOH HOH . H 5 HOH A 104 904 135 HOH HOH . H 5 HOH A 105 905 35 HOH HOH . H 5 HOH A 106 906 188 HOH HOH . H 5 HOH A 107 907 18 HOH HOH . H 5 HOH A 108 908 11 HOH HOH . H 5 HOH A 109 909 126 HOH HOH . H 5 HOH A 110 910 104 HOH HOH . H 5 HOH A 111 911 62 HOH HOH . H 5 HOH A 112 912 98 HOH HOH . H 5 HOH A 113 913 162 HOH HOH . H 5 HOH A 114 914 84 HOH HOH . H 5 HOH A 115 915 21 HOH HOH . H 5 HOH A 116 916 179 HOH HOH . H 5 HOH A 117 917 192 HOH HOH . H 5 HOH A 118 918 15 HOH HOH . H 5 HOH A 119 919 14 HOH HOH . H 5 HOH A 120 920 212 HOH HOH . H 5 HOH A 121 921 89 HOH HOH . H 5 HOH A 122 922 33 HOH HOH . H 5 HOH A 123 923 137 HOH HOH . H 5 HOH A 124 924 67 HOH HOH . H 5 HOH A 125 925 109 HOH HOH . H 5 HOH A 126 926 90 HOH HOH . H 5 HOH A 127 927 27 HOH HOH . H 5 HOH A 128 928 147 HOH HOH . H 5 HOH A 129 929 168 HOH HOH . H 5 HOH A 130 930 86 HOH HOH . H 5 HOH A 131 931 197 HOH HOH . H 5 HOH A 132 932 82 HOH HOH . H 5 HOH A 133 933 113 HOH HOH . H 5 HOH A 134 934 43 HOH HOH . H 5 HOH A 135 935 108 HOH HOH . H 5 HOH A 136 936 83 HOH HOH . H 5 HOH A 137 937 78 HOH HOH . H 5 HOH A 138 938 66 HOH HOH . H 5 HOH A 139 939 161 HOH HOH . H 5 HOH A 140 940 57 HOH HOH . H 5 HOH A 141 941 114 HOH HOH . H 5 HOH A 142 942 60 HOH HOH . H 5 HOH A 143 943 101 HOH HOH . H 5 HOH A 144 944 205 HOH HOH . H 5 HOH A 145 945 130 HOH HOH . H 5 HOH A 146 946 139 HOH HOH . H 5 HOH A 147 947 198 HOH HOH . H 5 HOH A 148 948 88 HOH HOH . H 5 HOH A 149 949 32 HOH HOH . H 5 HOH A 150 950 31 HOH HOH . H 5 HOH A 151 951 219 HOH HOH . H 5 HOH A 152 952 207 HOH HOH . H 5 HOH A 153 953 26 HOH HOH . H 5 HOH A 154 954 214 HOH HOH . H 5 HOH A 155 955 164 HOH HOH . H 5 HOH A 156 956 236 HOH HOH . H 5 HOH A 157 957 100 HOH HOH . H 5 HOH A 158 958 227 HOH HOH . H 5 HOH A 159 959 170 HOH HOH . H 5 HOH A 160 960 128 HOH HOH . H 5 HOH A 161 961 187 HOH HOH . H 5 HOH A 162 962 36 HOH HOH . H 5 HOH A 163 963 177 HOH HOH . H 5 HOH A 164 964 38 HOH HOH . H 5 HOH A 165 965 156 HOH HOH . H 5 HOH A 166 966 232 HOH HOH . H 5 HOH A 167 967 217 HOH HOH . H 5 HOH A 168 968 46 HOH HOH . H 5 HOH A 169 969 34 HOH HOH . H 5 HOH A 170 970 211 HOH HOH . H 5 HOH A 171 971 73 HOH HOH . H 5 HOH A 172 972 228 HOH HOH . H 5 HOH A 173 973 123 HOH HOH . H 5 HOH A 174 974 102 HOH HOH . H 5 HOH A 175 975 145 HOH HOH . H 5 HOH A 176 976 140 HOH HOH . H 5 HOH A 177 977 144 HOH HOH . H 5 HOH A 178 978 240 HOH HOH . H 5 HOH A 179 979 2 HOH HOH . H 5 HOH A 180 980 238 HOH HOH . H 5 HOH A 181 981 163 HOH HOH . H 5 HOH A 182 982 199 HOH HOH . H 5 HOH A 183 983 149 HOH HOH . H 5 HOH A 184 984 59 HOH HOH . H 5 HOH A 185 985 72 HOH HOH . H 5 HOH A 186 986 234 HOH HOH . H 5 HOH A 187 987 106 HOH HOH . H 5 HOH A 188 988 251 HOH HOH . H 5 HOH A 189 989 171 HOH HOH . H 5 HOH A 190 990 54 HOH HOH . H 5 HOH A 191 991 172 HOH HOH . H 5 HOH A 192 992 242 HOH HOH . H 5 HOH A 193 993 241 HOH HOH . H 5 HOH A 194 994 71 HOH HOH . H 5 HOH A 195 995 210 HOH HOH . H 5 HOH A 196 996 185 HOH HOH . H 5 HOH A 197 997 143 HOH HOH . H 5 HOH A 198 998 247 HOH HOH . H 5 HOH A 199 999 173 HOH HOH . H 5 HOH A 200 1000 99 HOH HOH . H 5 HOH A 201 1001 231 HOH HOH . H 5 HOH A 202 1002 196 HOH HOH . H 5 HOH A 203 1003 166 HOH HOH . H 5 HOH A 204 1004 175 HOH HOH . H 5 HOH A 205 1005 208 HOH HOH . H 5 HOH A 206 1006 124 HOH HOH . H 5 HOH A 207 1007 167 HOH HOH . H 5 HOH A 208 1008 246 HOH HOH . H 5 HOH A 209 1009 96 HOH HOH . H 5 HOH A 210 1010 194 HOH HOH . H 5 HOH A 211 1011 151 HOH HOH . H 5 HOH A 212 1012 233 HOH HOH . H 5 HOH A 213 1013 221 HOH HOH . H 5 HOH A 214 1014 85 HOH HOH . H 5 HOH A 215 1015 218 HOH HOH . H 5 HOH A 216 1016 237 HOH HOH . H 5 HOH A 217 1017 195 HOH HOH . H 5 HOH A 218 1018 91 HOH HOH . H 5 HOH A 219 1019 224 HOH HOH . H 5 HOH A 220 1020 248 HOH HOH . H 5 HOH A 221 1021 154 HOH HOH . H 5 HOH A 222 1022 235 HOH HOH . H 5 HOH A 223 1023 184 HOH HOH . H 5 HOH A 224 1024 49 HOH HOH . H 5 HOH A 225 1025 50 HOH HOH . H 5 HOH A 226 1026 216 HOH HOH . H 5 HOH A 227 1027 250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . B 2 25.5 26.236 48.511 1 37.54 ? PG ATP 701 A 1 HETATM 2 O O1G ATP . . . B 2 24.212 25.758 47.89 1 31.94 ? O1G ATP 701 A 1 HETATM 3 O O2G ATP . . . B 2 25.463 26.273 50.015 1 39.29 -1 O2G ATP 701 A 1 HETATM 4 O O3G ATP . . . B 2 26.04 27.494 47.854 1 41.19 ? O3G ATP 701 A 1 HETATM 5 P PB ATP . . . B 2 28.106 25.25 47.795 1 35.13 ? PB ATP 701 A 1 HETATM 6 O O1B ATP . . . B 2 28.823 24.025 48.282 1 39.43 -1 O1B ATP 701 A 1 HETATM 7 O O2B ATP . . . B 2 28.608 26.628 48.208 1 31.94 ? O2B ATP 701 A 1 HETATM 8 O O3B ATP . . . B 2 26.542 25.052 48.143 1 33.97 ? O3B ATP 701 A 1 HETATM 9 P PA ATP . . . B 2 28.272 26.237 45.111 1 26.67 ? PA ATP 701 A 1 HETATM 10 O O1A ATP . . . B 2 28.257 27.59 45.769 1 31.08 -1 O1A ATP 701 A 1 HETATM 11 O O2A ATP . . . B 2 27.303 25.956 43.998 1 28.42 ? O2A ATP 701 A 1 HETATM 12 O O3A ATP . . . B 2 28.043 25.074 46.188 1 29.56 ? O3A ATP 701 A 1 HETATM 13 O O5' ATP . . . B 2 29.761 25.963 44.606 1 22.16 ? O5' ATP 701 A 1 HETATM 14 C C5' ATP . . . B 2 30.146 24.699 44.063 1 20.8 ? C5' ATP 701 A 1 HETATM 15 C C4' ATP . . . B 2 31.611 24.533 44.41 1 19.88 ? C4' ATP 701 A 1 HETATM 16 O O4' ATP . . . B 2 32.347 25.579 43.763 1 19.95 ? O4' ATP 701 A 1 HETATM 17 C C3' ATP . . . B 2 31.84 24.712 45.905 1 19.68 ? C3' ATP 701 A 1 HETATM 18 O O3' ATP . . . B 2 32.841 23.772 46.299 1 20.83 ? O3' ATP 701 A 1 HETATM 19 C C2' ATP . . . B 2 32.383 26.125 46.024 1 20.84 ? C2' ATP 701 A 1 HETATM 20 O O2' ATP . . . B 2 33.209 26.355 47.159 1 21.92 ? O2' ATP 701 A 1 HETATM 21 C C1' ATP . . . B 2 33.137 26.282 44.717 1 19.87 ? C1' ATP 701 A 1 HETATM 22 N N9 ATP . . . B 2 33.227 27.684 44.271 1 18.78 ? N9 ATP 701 A 1 HETATM 23 C C8 ATP . . . B 2 32.208 28.532 44.005 1 19 ? C8 ATP 701 A 1 HETATM 24 N N7 ATP . . . B 2 32.696 29.736 43.602 1 19.8 ? N7 ATP 701 A 1 HETATM 25 C C5 ATP . . . B 2 34.048 29.642 43.618 1 15.9 ? C5 ATP 701 A 1 HETATM 26 C C6 ATP . . . B 2 35.177 30.53 43.306 1 18.11 ? C6 ATP 701 A 1 HETATM 27 N N6 ATP . . . B 2 34.95 31.801 42.895 1 18.58 ? N6 ATP 701 A 1 HETATM 28 N N1 ATP . . . B 2 36.425 30.047 43.456 1 17.53 ? N1 ATP 701 A 1 HETATM 29 C C2 ATP . . . B 2 36.67 28.787 43.868 1 19.15 ? C2 ATP 701 A 1 HETATM 30 N N3 ATP . . . B 2 35.686 27.918 44.16 1 19.25 ? N3 ATP 701 A 1 HETATM 31 C C4 ATP . . . B 2 34.388 28.294 44.054 1 18.59 ? C4 ATP 701 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 31 #