data_8HOG # _model_server_result.job_id TB5fhEs4tFVE2-5mymDk7Q _model_server_result.datetime_utc '2024-11-19 23:23:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hog # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8HOG # _exptl.entry_id 8HOG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 890.1 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[4-[(4-methyl-4-oxidanyl-cyclohexyl)methylamino]-3-nitro-phenyl]sulfonyl-4-[2-[(2~{S})-2-(2-propan-2-ylphenyl)pyrrolidin-1-yl]-7-azaspiro[3.5]nonan-7-yl]-2-(1~{H}-pyrrolo[2,3-b]pyridin-5-yloxy)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HOG _cell.length_a 32.56 _cell.length_b 47.549 _cell.length_c 101.084 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HOG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C49 H59 N7 O7 S' _chem_comp.formula_weight 890.1 _chem_comp.id 98I _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[4-[(4-methyl-4-oxidanyl-cyclohexyl)methylamino]-3-nitro-phenyl]sulfonyl-4-[2-[(2~{S})-2-(2-propan-2-ylphenyl)pyrrolidin-1-yl]-7-azaspiro[3.5]nonan-7-yl]-2-(1~{H}-pyrrolo[2,3-b]pyridin-5-yloxy)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OBL NBC 98I sing 1 n n OAU SAT 98I doub 2 n n NBC OBM 98I doub 3 n n NBC CBA 98I sing 4 n n CBB CBA 98I doub 5 n y CBB CAW 98I sing 6 n y CBA CAZ 98I sing 7 n y SAT CAW 98I sing 8 n n SAT OAV 98I doub 9 n n SAT NAS 98I sing 10 n n CAW CAX 98I doub 11 n y CAZ NBD 98I sing 12 n n CAZ CAY 98I doub 13 n y NBD CBE 98I sing 14 n n NAS CAQ 98I sing 15 n n CAX CAY 98I sing 16 n y CBH CBG 98I sing 17 n n CBH CBI 98I sing 18 n n CBF CBG 98I sing 19 n n CBF CBE 98I sing 20 n n CBF CBK 98I sing 21 n n OBP CBI 98I sing 22 n n CBJ CBI 98I sing 23 n n CBJ CBK 98I sing 24 n n CBI CBO 98I sing 25 n n CAN CAO 98I doub 26 n y CAN CAJ 98I sing 27 n y CAB CAA 98I doub 28 n y CAB CAC 98I sing 29 n y CAO NAP 98I sing 30 n y CAQ CAC 98I sing 31 n n CAQ OAR 98I doub 32 n n CAA CAF 98I sing 33 n y CAC CAD 98I doub 34 n y CAJ CAI 98I doub 35 n y CAJ CAK 98I sing 36 n y NAP CAK 98I sing 37 n y CAI CAH 98I sing 38 n y CCH CCG 98I doub 39 n y CCH CCI 98I sing 40 n y CAK NAL 98I doub 41 n y CBU NBN 98I sing 42 n n CBU CBT 98I sing 43 n n CAF NBN 98I sing 44 n n CAF CAE 98I doub 45 n y CAD CAE 98I sing 46 n y CAD OAG 98I sing 47 n n CCG CCF 98I sing 48 n y CAH OAG 98I sing 49 n n CAH CAM 98I doub 50 n y NBN CBQ 98I sing 51 n n CBT CBS 98I sing 52 n n CCI CCD 98I doub 53 n y NAL CAM 98I sing 54 n y CCF CCE 98I doub 55 n y CBX CBS 98I sing 56 n n CBX CBW 98I sing 57 n n CBQ CBR 98I sing 58 n n CBS CBR 98I sing 59 n n CBS CBV 98I sing 60 n n CCD CCE 98I sing 61 n y CCD CCC 98I sing 62 n n CCE CCJ 98I sing 63 n n NBY CBW 98I sing 64 n n NBY CCC 98I sing 65 n n NBY CBZ 98I sing 66 n n CBV CBW 98I sing 67 n n CCC CCB 98I sing 68 n n CCB CCA 98I sing 69 n n CBZ CCA 98I sing 70 n n CCJ CCL 98I sing 71 n n CCJ CCK 98I sing 72 n n CAA H1 98I sing 73 n n CAB H2 98I sing 74 n n CAE H3 98I sing 75 n n CAI H4 98I sing 76 n n CAM H5 98I sing 77 n n CAN H6 98I sing 78 n n CAO H7 98I sing 79 n n CAX H8 98I sing 80 n n CAY H9 98I sing 81 n n CBB H10 98I sing 82 n n CBE H11 98I sing 83 n n CBE H12 98I sing 84 n n CBF H13 98I sing 85 n n CBG H14 98I sing 86 n n CBG H15 98I sing 87 n n CBH H16 98I sing 88 n n CBH H17 98I sing 89 n n CBJ H18 98I sing 90 n n CBJ H19 98I sing 91 n n CBK H20 98I sing 92 n n CBK H21 98I sing 93 n n CBO H22 98I sing 94 n n CBO H23 98I sing 95 n n CBO H24 98I sing 96 n n CBQ H25 98I sing 97 n n CBQ H26 98I sing 98 n n CBR H27 98I sing 99 n n CBR H28 98I sing 100 n n CBT H29 98I sing 101 n n CBT H30 98I sing 102 n n CBU H31 98I sing 103 n n CBU H32 98I sing 104 n n CBV H33 98I sing 105 n n CBV H34 98I sing 106 n n CBW H35 98I sing 107 n n CBX H36 98I sing 108 n n CBX H37 98I sing 109 n n CBZ H38 98I sing 110 n n CBZ H39 98I sing 111 n n CCA H40 98I sing 112 n n CCA H41 98I sing 113 n n CCB H42 98I sing 114 n n CCB H43 98I sing 115 n n CCC H44 98I sing 116 n n CCF H45 98I sing 117 n n CCG H46 98I sing 118 n n CCH H47 98I sing 119 n n CCI H48 98I sing 120 n n CCJ H49 98I sing 121 n n CCK H50 98I sing 122 n n CCK H51 98I sing 123 n n CCK H52 98I sing 124 n n CCL H53 98I sing 125 n n CCL H54 98I sing 126 n n CCL H55 98I sing 127 n n NAP H56 98I sing 128 n n NAS H57 98I sing 129 n n NBD H58 98I sing 130 n n OBP H60 98I sing 131 n n # _atom_sites.entry_id 8HOG _atom_sites.fract_transf_matrix[1][1] 0.030713 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009893 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 98I A 1 301 301 98I XXX . C 3 HOH A 1 401 17 HOH HOH . C 3 HOH A 2 402 7 HOH HOH . C 3 HOH A 3 403 44 HOH HOH . C 3 HOH A 4 404 54 HOH HOH . C 3 HOH A 5 405 30 HOH HOH . C 3 HOH A 6 406 3 HOH HOH . C 3 HOH A 7 407 9 HOH HOH . C 3 HOH A 8 408 36 HOH HOH . C 3 HOH A 9 409 6 HOH HOH . C 3 HOH A 10 410 45 HOH HOH . C 3 HOH A 11 411 31 HOH HOH . C 3 HOH A 12 412 15 HOH HOH . C 3 HOH A 13 413 43 HOH HOH . C 3 HOH A 14 414 24 HOH HOH . C 3 HOH A 15 415 1 HOH HOH . C 3 HOH A 16 416 8 HOH HOH . C 3 HOH A 17 417 28 HOH HOH . C 3 HOH A 18 418 4 HOH HOH . C 3 HOH A 19 419 34 HOH HOH . C 3 HOH A 20 420 39 HOH HOH . C 3 HOH A 21 421 52 HOH HOH . C 3 HOH A 22 422 25 HOH HOH . C 3 HOH A 23 423 22 HOH HOH . C 3 HOH A 24 424 32 HOH HOH . C 3 HOH A 25 425 46 HOH HOH . C 3 HOH A 26 426 40 HOH HOH . C 3 HOH A 27 427 47 HOH HOH . C 3 HOH A 28 428 13 HOH HOH . C 3 HOH A 29 429 11 HOH HOH . C 3 HOH A 30 430 23 HOH HOH . C 3 HOH A 31 431 20 HOH HOH . C 3 HOH A 32 432 27 HOH HOH . C 3 HOH A 33 433 2 HOH HOH . C 3 HOH A 34 434 5 HOH HOH . C 3 HOH A 35 435 21 HOH HOH . C 3 HOH A 36 436 14 HOH HOH . C 3 HOH A 37 437 10 HOH HOH . C 3 HOH A 38 438 18 HOH HOH . C 3 HOH A 39 439 38 HOH HOH . C 3 HOH A 40 440 53 HOH HOH . C 3 HOH A 41 441 42 HOH HOH . C 3 HOH A 42 442 26 HOH HOH . C 3 HOH A 43 443 57 HOH HOH . C 3 HOH A 44 444 12 HOH HOH . C 3 HOH A 45 445 37 HOH HOH . C 3 HOH A 46 446 50 HOH HOH . C 3 HOH A 47 447 55 HOH HOH . C 3 HOH A 48 448 51 HOH HOH . C 3 HOH A 49 449 41 HOH HOH . C 3 HOH A 50 450 29 HOH HOH . C 3 HOH A 51 451 49 HOH HOH . C 3 HOH A 52 452 56 HOH HOH . C 3 HOH A 53 453 16 HOH HOH . C 3 HOH A 54 454 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 98I . . . B 2 -12.992 6.683 20.032 1 32.4 ? CAA 98I 301 A 1 HETATM 2 C CAB 98I . . . B 2 -12.197 7.673 19.477 1 26.85 ? CAB 98I 301 A 1 HETATM 3 C CAC 98I . . . B 2 -11.089 8.174 20.153 1 31.8 ? CAC 98I 301 A 1 HETATM 4 C CAD 98I . . . B 2 -10.778 7.613 21.394 1 35.85 ? CAD 98I 301 A 1 HETATM 5 C CAE 98I . . . B 2 -11.552 6.613 21.953 1 30.83 ? CAE 98I 301 A 1 HETATM 6 C CAF 98I . . . B 2 -12.697 6.152 21.289 1 36.47 ? CAF 98I 301 A 1 HETATM 7 C CAH 98I . . . B 2 -8.403 7.864 21.663 1 25.92 ? CAH 98I 301 A 1 HETATM 8 C CAI 98I . . . B 2 -8.166 7.01 20.593 1 29.81 ? CAI 98I 301 A 1 HETATM 9 C CAJ 98I . . . B 2 -6.845 6.694 20.285 1 32.05 ? CAJ 98I 301 A 1 HETATM 10 C CAK 98I . . . B 2 -5.844 7.293 21.095 1 38.87 ? CAK 98I 301 A 1 HETATM 11 C CAM 98I . . . B 2 -7.346 8.405 22.381 1 34.26 ? CAM 98I 301 A 1 HETATM 12 C CAN 98I . . . B 2 -6.158 5.874 19.34 1 36.12 ? CAN 98I 301 A 1 HETATM 13 C CAO 98I . . . B 2 -4.829 6.003 19.593 1 35.22 ? CAO 98I 301 A 1 HETATM 14 C CAQ 98I . . . B 2 -10.341 9.314 19.532 1 32.64 ? CAQ 98I 301 A 1 HETATM 15 C CAW 98I . . . B 2 -7.833 9.995 17.527 1 39.43 ? CAW 98I 301 A 1 HETATM 16 C CAX 98I . . . B 2 -7.09 10.597 18.528 1 40.61 ? CAX 98I 301 A 1 HETATM 17 C CAY 98I . . . B 2 -5.788 10.179 18.751 1 40.17 ? CAY 98I 301 A 1 HETATM 18 C CAZ 98I . . . B 2 -5.195 9.174 17.985 1 40.16 ? CAZ 98I 301 A 1 HETATM 19 C CBA 98I . . . B 2 -5.993 8.595 16.967 1 39.31 ? CBA 98I 301 A 1 HETATM 20 C CBB 98I . . . B 2 -7.291 8.994 16.741 1 36.74 ? CBB 98I 301 A 1 HETATM 21 C CBE 98I . . . B 2 -2.919 9.565 18.955 1 36.75 ? CBE 98I 301 A 1 HETATM 22 C CBF 98I . . . B 2 -1.488 9.15 18.63 1 39.2 ? CBF 98I 301 A 1 HETATM 23 C CBG 98I . . . B 2 -1.186 7.722 19.073 1 39.24 ? CBG 98I 301 A 1 HETATM 24 C CBH 98I . . . B 2 0.256 7.313 18.751 1 42.38 ? CBH 98I 301 A 1 HETATM 25 C CBI 98I . . . B 2 1.291 8.254 19.364 1 48.28 ? CBI 98I 301 A 1 HETATM 26 C CBJ 98I . . . B 2 0.97 9.674 18.908 1 54.15 ? CBJ 98I 301 A 1 HETATM 27 C CBK 98I . . . B 2 -0.462 10.098 19.248 1 48.01 ? CBK 98I 301 A 1 HETATM 28 C CBO 98I . . . B 2 1.295 8.151 20.883 1 46.15 ? CBO 98I 301 A 1 HETATM 29 C CBQ 98I . . . B 2 -13.051 4.464 23.025 1 33.06 ? CBQ 98I 301 A 1 HETATM 30 C CBR 98I . . . B 2 -14.189 4.042 23.941 1 33.58 ? CBR 98I 301 A 1 HETATM 31 C CBS 98I . . . B 2 -15.223 3.224 23.153 1 31.55 ? CBS 98I 301 A 1 HETATM 32 C CBT 98I . . . B 2 -15.717 4.058 21.961 1 39.71 ? CBT 98I 301 A 1 HETATM 33 C CBU 98I . . . B 2 -14.545 4.51 21.104 1 38.16 ? CBU 98I 301 A 1 HETATM 34 C CBV 98I . . . B 2 -16.358 2.648 24.022 1 32.06 ? CBV 98I 301 A 1 HETATM 35 C CBW 98I . . . B 2 -15.528 1.347 24.12 1 29.67 ? CBW 98I 301 A 1 HETATM 36 C CBX 98I . . . B 2 -14.832 1.776 22.814 1 30.91 ? CBX 98I 301 A 1 HETATM 37 C CBZ 98I . . . B 2 -17.476 0.035 24.986 1 35.82 ? CBZ 98I 301 A 1 HETATM 38 C CCA 98I . . . B 2 -17.845 -1.456 25.015 1 35.56 ? CCA 98I 301 A 1 HETATM 39 C CCB 98I . . . B 2 -16.759 -2.139 24.211 1 33.84 ? CCB 98I 301 A 1 HETATM 40 C CCC 98I . . . B 2 -15.608 -1.142 24.278 1 30.02 ? CCC 98I 301 A 1 HETATM 41 C CCD 98I . . . B 2 -14.514 -1.415 23.268 1 32.62 ? CCD 98I 301 A 1 HETATM 42 C CCE 98I . . . B 2 -13.174 -1.367 23.663 1 31.94 ? CCE 98I 301 A 1 HETATM 43 C CCF 98I . . . B 2 -12.177 -1.528 22.705 1 27.44 ? CCF 98I 301 A 1 HETATM 44 C CCG 98I . . . B 2 -12.508 -1.74 21.375 1 29.42 ? CCG 98I 301 A 1 HETATM 45 C CCH 98I . . . B 2 -13.829 -1.811 20.993 1 30.38 ? CCH 98I 301 A 1 HETATM 46 C CCI 98I . . . B 2 -14.831 -1.657 21.934 1 33.3 ? CCI 98I 301 A 1 HETATM 47 C CCJ 98I . . . B 2 -12.756 -1.182 25.113 1 33.7 ? CCJ 98I 301 A 1 HETATM 48 C CCK 98I . . . B 2 -11.939 -2.374 25.61 1 35.22 ? CCK 98I 301 A 1 HETATM 49 C CCL 98I . . . B 2 -11.962 0.107 25.318 1 34.45 ? CCL 98I 301 A 1 HETATM 50 N NAL 98I . . . B 2 -6.051 8.128 22.117 1 42.17 ? NAL 98I 301 A 1 HETATM 51 N NAP 98I . . . B 2 -4.626 6.86 20.65 1 34.68 ? NAP 98I 301 A 1 HETATM 52 N NAS 98I . . . B 2 -10.435 9.418 18.154 1 31.97 ? NAS 98I 301 A 1 HETATM 53 N NBC 98I . . . B 2 -5.493 7.544 16.101 1 36.52 ? NBC 98I 301 A 1 HETATM 54 N NBD 98I . . . B 2 -3.903 8.78 18.23 1 40.28 ? NBD 98I 301 A 1 HETATM 55 N NBN 98I . . . B 2 -13.574 5.257 21.911 1 35.05 ? NBN 98I 301 A 1 HETATM 56 N NBY 98I . . . B 2 -16.343 0.112 24.049 1 32.86 ? NBY 98I 301 A 1 HETATM 57 O OAG 98I . . . B 2 -9.707 8.14 22.098 1 31.23 ? OAG 98I 301 A 1 HETATM 58 O OAR 98I . . . B 2 -9.844 10.213 20.212 1 34.14 ? OAR 98I 301 A 1 HETATM 59 O OAU 98I . . . B 2 -9.719 11.755 17.859 1 47.43 ? OAU 98I 301 A 1 HETATM 60 O OAV 98I . . . B 2 -9.849 10.232 15.904 1 38.81 ? OAV 98I 301 A 1 HETATM 61 O OBL 98I . . . B 2 -4.344 7.165 16.264 1 41.3 -1 OBL 98I 301 A 1 HETATM 62 O OBM 98I . . . B 2 -6.269 7.041 15.294 1 38.44 ? OBM 98I 301 A 1 HETATM 63 O OBP 98I . . . B 2 2.6 7.878 18.893 1 51.43 ? OBP 98I 301 A 1 HETATM 64 S SAT 98I . . . B 2 -9.511 10.464 17.276 1 35.72 ? SAT 98I 301 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 64 #