data_8HPO # _model_server_result.job_id VtwRrB7wRGBLlul08gwMrw _model_server_result.datetime_utc '2025-04-10 00:42:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hpo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":502}' # _entry.id 8HPO # _exptl.entry_id 8HPO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 39.098 _entity.id 13 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HPO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HPO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details undecameric _pdbx_struct_assembly.oligomeric_count 11 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 13 N N N ? 13 O N N ? 13 Q N N ? 13 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ILE 308 D ILE 308 1_555 B N SEP 309 D SEP 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C SEP 309 D SEP 309 1_555 B N LEU 310 D LEU 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale3 C C ALA 5 F ALA 5 1_555 C N TPO 6 F TPO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale4 C C TPO 6 F TPO 6 1_555 C N PRO 7 F PRO 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale5 C C ILE 11 F ILE 11 1_555 C N TPO 12 F TPO 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 C C TPO 12 F TPO 12 1_555 C N VAL 13 F VAL 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 C C PRO 264 F PRO 264 1_555 C N SEP 265 F SEP 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 C C SEP 265 F SEP 265 1_555 C N ALA 266 F ALA 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.393 ? covale ? covale9 C C ASN 364 F ASN 364 1_555 C N TPO 365 F TPO 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 C C TPO 365 F TPO 365 1_555 C N PRO 366 F PRO 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale11 C C PRO 387 F PRO 387 1_555 C N SEP 388 F SEP 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 C C SEP 388 F SEP 388 1_555 C N VAL 389 F VAL 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale13 C C HIS 393 F HIS 393 1_555 L N TPO . F TPO 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale14 E C HIS 173 I HIS 173 1_555 E N SEP 174 I SEP 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? covale ? covale15 E C SEP 174 I SEP 174 1_555 E N ILE 175 I ILE 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.381 ? covale ? covale16 I C LEU 166 E LEU 166 1_555 I N TPO 167 E TPO 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.3 ? covale ? covale17 I C TPO 167 E TPO 167 1_555 I N PRO 168 E PRO 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale18 I C LEU 170 E LEU 170 1_555 I N SEP 171 E SEP 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale19 I C SEP 171 E SEP 171 1_555 I N LEU 172 E LEU 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? metalc ? metalc1 C O ASP 184 F ASP 184 1_555 N K K . F K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc2 C OD1 ASP 186 F ASP 186 1_555 M ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.809 ? metalc ? metalc3 C O ASP 186 F ASP 186 1_555 N K K . F K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.305 ? metalc ? metalc4 C ND1 HIS 188 F HIS 188 1_555 M ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc5 C O HIS 188 F HIS 188 1_555 N K K . F K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc6 C O PHE 197 F PHE 197 1_555 O K K . F K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc7 C O THR 200 F THR 200 1_555 O K K . F K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.052 ? metalc ? metalc8 C O VAL 203 F VAL 203 1_555 O K K . F K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc9 C O PHE 208 F PHE 208 1_555 N K K . F K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.441 ? metalc ? metalc10 C O TYR 232 F TYR 232 1_555 O K K . F K 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.914 ? metalc ? metalc11 C OD2 ASP 274 F ASP 274 1_555 M ZN ZN . F ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc12 D O ASP 184 G ASP 184 1_555 Q K K . G K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.128 ? metalc ? metalc13 D OD1 ASP 184 G ASP 184 1_555 Q K K . G K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc14 D OD1 ASP 186 G ASP 186 1_555 P ZN ZN . G ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? metalc ? metalc15 D O ASP 186 G ASP 186 1_555 Q K K . G K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc16 D ND1 HIS 188 G HIS 188 1_555 P ZN ZN . G ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc17 D O HIS 188 G HIS 188 1_555 Q K K . G K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.986 ? metalc ? metalc18 D O PHE 197 G PHE 197 1_555 R K K . G K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.135 ? metalc ? metalc19 D O VAL 203 G VAL 203 1_555 R K K . G K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc20 D OG1 THR 205 G THR 205 1_555 R K K . G K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc21 D OG SER 207 G SER 207 1_555 Q K K . G K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? metalc ? metalc22 D O TYR 232 G TYR 232 1_555 R K K . G K 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.002 ? metalc ? metalc23 D OD2 ASP 274 G ASP 274 1_555 P ZN ZN . G ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8HPO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 11 TPO F 1 501 394 TPO TPO . M 12 ZN F 1 502 401 ZN ZN . N 13 K F 1 503 402 K K . O 13 K F 1 504 403 K K . P 12 ZN G 1 501 401 ZN ZN . Q 13 K G 1 502 402 K K . R 13 K G 1 503 403 K K . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id Q _atom_site.label_entity_id 13 _atom_site.Cartn_x 220.609 _atom_site.Cartn_y 183.909 _atom_site.Cartn_z 243.3 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 502 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #