data_8HSA # _model_server_result.job_id 1a1sb2EmNRbSocE5Dxbq_A _model_server_result.datetime_utc '2025-09-21 04:11:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hsa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":401}' # _entry.id 8HSA # _exptl.entry_id 8HSA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.61 _cell.angle_gamma 90 _cell.entry_id 8HSA _cell.length_a 67.931 _cell.length_b 108.647 _cell.length_c 130.883 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HSA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,I,K 1 1 B,D,J,L 2 1 E,G,M,O 3 1 F,N 4 1 H,P 4 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_655 x+1,y,z 1 0 0 0 1 0 0 0 1 67.931 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 235 n n PA O2A NAD sing 236 n n PA O5B NAD sing 237 n n PA O3 NAD sing 238 n n O2A HOA2 NAD sing 239 n n O5B C5B NAD sing 240 n n C5B C4B NAD sing 241 n n C5B H51A NAD sing 242 n n C5B H52A NAD sing 243 n n C4B O4B NAD sing 244 n n C4B C3B NAD sing 245 n n C4B H4B NAD sing 246 n n O4B C1B NAD sing 247 n n C3B O3B NAD sing 248 n n C3B C2B NAD sing 249 n n C3B H3B NAD sing 250 n n O3B HO3A NAD sing 251 n n C2B O2B NAD sing 252 n n C2B C1B NAD sing 253 n n C2B H2B NAD sing 254 n n O2B HO2A NAD sing 255 n n C1B N9A NAD sing 256 n n C1B H1B NAD sing 257 n n N9A C8A NAD sing 258 n y N9A C4A NAD sing 259 n y C8A N7A NAD doub 260 n y C8A H8A NAD sing 261 n n N7A C5A NAD sing 262 n y C5A C6A NAD sing 263 n y C5A C4A NAD doub 264 n y C6A N6A NAD sing 265 n n C6A N1A NAD doub 266 n y N6A H61A NAD sing 267 n n N6A H62A NAD sing 268 n n N1A C2A NAD sing 269 n y C2A N3A NAD doub 270 n y C2A H2A NAD sing 271 n n N3A C4A NAD sing 272 n y O3 PN NAD sing 273 n n PN O1N NAD doub 274 n n PN O2N NAD sing 275 n n PN O5D NAD sing 276 n n O5D C5D NAD sing 277 n n C5D C4D NAD sing 278 n n C5D H51N NAD sing 279 n n C5D H52N NAD sing 280 n n C4D O4D NAD sing 281 n n C4D C3D NAD sing 282 n n C4D H4D NAD sing 283 n n O4D C1D NAD sing 284 n n C3D O3D NAD sing 285 n n C3D C2D NAD sing 286 n n C3D H3D NAD sing 287 n n O3D HO3N NAD sing 288 n n C2D O2D NAD sing 289 n n C2D C1D NAD sing 290 n n C2D H2D NAD sing 291 n n O2D HO2N NAD sing 292 n n C1D N1N NAD sing 293 n n C1D H1D NAD sing 294 n n N1N C2N NAD sing 295 n y N1N C6N NAD doub 296 n y C2N C3N NAD doub 297 n y C2N H2N NAD sing 298 n n C3N C7N NAD sing 299 n n C3N C4N NAD sing 300 n y C7N O7N NAD doub 301 n n C7N N7N NAD sing 302 n n N7N H71N NAD sing 303 n n N7N H72N NAD sing 304 n n C4N C5N NAD doub 305 n y C4N H4N NAD sing 306 n n C5N C6N NAD sing 307 n y C5N H5N NAD sing 308 n n C6N H6N NAD sing 309 n n # _atom_sites.entry_id 8HSA _atom_sites.fract_transf_matrix[1][1] 0.014721 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001706 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009204 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007692 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 NAD G 1 401 401 NAD NAD . J 2 NAD A 1 401 401 NAD NAD . K 2 NAD B 1 401 401 NAD NAD . L 2 NAD C 1 401 401 NAD NAD . M 2 NAD D 1 401 401 NAD NAD . N 2 NAD E 1 401 401 NAD NAD . O 2 NAD F 1 401 401 NAD NAD . P 2 NAD H 1 401 401 NAD NAD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . N 2 19.355 20.535 37.748 1 79.23 ? PA NAD 401 E 1 HETATM 2 O O1A NAD . . . N 2 19.948 19.72 36.631 1 64.38 ? O1A NAD 401 E 1 HETATM 3 O O2A NAD . . . N 2 18.815 19.856 38.982 1 61.4 ? O2A NAD 401 E 1 HETATM 4 O O5B NAD . . . N 2 18.16 21.377 37.113 1 56.8 ? O5B NAD 401 E 1 HETATM 5 C C5B NAD . . . N 2 17.069 20.651 36.586 1 51.46 ? C5B NAD 401 E 1 HETATM 6 C C4B NAD . . . N 2 17.032 20.833 35.082 1 55.84 ? C4B NAD 401 E 1 HETATM 7 O O4B NAD . . . N 2 18.335 20.814 34.492 1 52.36 ? O4B NAD 401 E 1 HETATM 8 C C3B NAD . . . N 2 16.262 19.687 34.479 1 56.74 ? C3B NAD 401 E 1 HETATM 9 O O3B NAD . . . N 2 15.173 20.212 33.74 1 51.68 ? O3B NAD 401 E 1 HETATM 10 C C2B NAD . . . N 2 17.253 18.991 33.583 1 59.69 ? C2B NAD 401 E 1 HETATM 11 O O2B NAD . . . N 2 16.67 18.501 32.38 1 59.22 ? O2B NAD 401 E 1 HETATM 12 C C1B NAD . . . N 2 18.255 20.073 33.276 1 51.92 ? C1B NAD 401 E 1 HETATM 13 N N9A NAD . . . N 2 19.492 19.396 32.848 1 54.28 ? N9A NAD 401 E 1 HETATM 14 C C8A NAD . . . N 2 20.214 18.528 33.57 1 51.05 ? C8A NAD 401 E 1 HETATM 15 N N7A NAD . . . N 2 21.278 18.087 32.861 1 47.13 ? N7A NAD 401 E 1 HETATM 16 C C5A NAD . . . N 2 21.23 18.676 31.659 1 43.96 ? C5A NAD 401 E 1 HETATM 17 C C6A NAD . . . N 2 22.042 18.645 30.436 1 44.06 ? C6A NAD 401 E 1 HETATM 18 N N6A NAD . . . N 2 23.143 17.869 30.369 1 47.3 ? N6A NAD 401 E 1 HETATM 19 N N1A NAD . . . N 2 21.648 19.406 29.399 1 46.08 ? N1A NAD 401 E 1 HETATM 20 C C2A NAD . . . N 2 20.548 20.171 29.464 1 44.75 ? C2A NAD 401 E 1 HETATM 21 N N3A NAD . . . N 2 19.763 20.243 30.545 1 43.02 ? N3A NAD 401 E 1 HETATM 22 C C4A NAD . . . N 2 20.047 19.53 31.651 1 46.09 ? C4A NAD 401 E 1 HETATM 23 O O3 NAD . . . N 2 20.43 21.661 38.173 1 65.54 ? O3 NAD 401 E 1 HETATM 24 P PN NAD . . . N 2 20.27 22.517 39.522 1 68.96 ? PN NAD 401 E 1 HETATM 25 O O1N NAD . . . N 2 18.88 23.093 39.569 1 53.89 ? O1N NAD 401 E 1 HETATM 26 O O2N NAD . . . N 2 20.792 21.696 40.669 1 55.5 ? O2N NAD 401 E 1 HETATM 27 O O5D NAD . . . N 2 21.274 23.729 39.281 1 50.74 ? O5D NAD 401 E 1 HETATM 28 C C5D NAD . . . N 2 21.524 24.189 37.965 1 44.19 ? C5D NAD 401 E 1 HETATM 29 C C4D NAD . . . N 2 22.856 24.913 37.981 1 43.7 ? C4D NAD 401 E 1 HETATM 30 O O4D NAD . . . N 2 23.055 25.554 39.242 1 49.34 ? O4D NAD 401 E 1 HETATM 31 C C3D NAD . . . N 2 23.987 23.939 37.817 1 40.03 ? C3D NAD 401 E 1 HETATM 32 O O3D NAD . . . N 2 24.988 24.571 37.035 1 33.63 ? O3D NAD 401 E 1 HETATM 33 C C2D NAD . . . N 2 24.447 23.689 39.228 1 41.49 ? C2D NAD 401 E 1 HETATM 34 O O2D NAD . . . N 2 25.809 23.28 39.286 1 39.62 ? O2D NAD 401 E 1 HETATM 35 C C1D NAD . . . N 2 24.227 25.041 39.871 1 43.69 ? C1D NAD 401 E 1 HETATM 36 N N1N NAD . . . N 2 24.03 24.948 41.313 1 41.14 ? N1N NAD 401 E 1 HETATM 37 C C2N NAD . . . N 2 22.906 24.451 41.829 1 42.66 ? C2N NAD 401 E 1 HETATM 38 C C3N NAD . . . N 2 22.738 24.378 43.206 1 46.5 ? C3N NAD 401 E 1 HETATM 39 C C7N NAD . . . N 2 21.489 23.814 43.816 1 47.62 ? C7N NAD 401 E 1 HETATM 40 O O7N NAD . . . N 2 20.542 23.54 43.106 1 53.27 ? O7N NAD 401 E 1 HETATM 41 N N7N NAD . . . N 2 21.44 23.625 45.13 1 38.27 ? N7N NAD 401 E 1 HETATM 42 C C4N NAD . . . N 2 23.743 24.83 44.039 1 41.79 ? C4N NAD 401 E 1 HETATM 43 C C5N NAD . . . N 2 24.892 25.346 43.476 1 39.5 ? C5N NAD 401 E 1 HETATM 44 C C6N NAD . . . N 2 25.005 25.395 42.099 1 39.3 ? C6N NAD 401 E 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 44 #