data_8HSI # _model_server_result.job_id Kd4VnWz1R7u2PP61JQqAuw _model_server_result.datetime_utc '2025-03-06 07:35:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hsi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 8HSI # _exptl.entry_id 8HSI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HSI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 3 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG A 486 NAG 2 n B NAG 2 B 2 NAG A 487 NAG 2 n C NAG 1 C 1 NAG A 602 NAG 2 n C NAG 2 C 2 NAG A 603 NAG 3 n D NAG 1 D 1 NAG A 604 NAG 3 n D NAG 2 D 2 NAG A 605 NAG 3 n D BMA 3 D 3 BMA A 606 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 74 A CYS 74 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf2 A SG CYS 89 A CYS 89 1_555 A SG CYS 431 A CYS 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A ND2 ASN 62 A ASN 62 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 A ND2 ASN 79 A ASN 79 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale3 A ND2 ASN 127 A ASN 127 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale4 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale5 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale6 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale7 D O4 NAG . D NAG 2 1_555 D C1 BMA . D BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 94 n n C1 C10 CLR sing 95 n n C1 H11 CLR sing 96 n n C1 H12 CLR sing 97 n n C2 C3 CLR sing 98 n n C2 H21 CLR sing 99 n n C2 H22 CLR sing 100 n n C3 C4 CLR sing 101 n n C3 O1 CLR sing 102 n n C3 H3 CLR sing 103 n n C4 C5 CLR sing 104 n n C4 H41 CLR sing 105 n n C4 H42 CLR sing 106 n n C5 C6 CLR doub 107 n n C5 C10 CLR sing 108 n n C6 C7 CLR sing 109 n n C6 H6 CLR sing 110 n n C7 C8 CLR sing 111 n n C7 H71 CLR sing 112 n n C7 H72 CLR sing 113 n n C8 C9 CLR sing 114 n n C8 C14 CLR sing 115 n n C8 H8 CLR sing 116 n n C9 C10 CLR sing 117 n n C9 C11 CLR sing 118 n n C9 H9 CLR sing 119 n n C10 C19 CLR sing 120 n n C11 C12 CLR sing 121 n n C11 H111 CLR sing 122 n n C11 H112 CLR sing 123 n n C12 C13 CLR sing 124 n n C12 H121 CLR sing 125 n n C12 H122 CLR sing 126 n n C13 C14 CLR sing 127 n n C13 C17 CLR sing 128 n n C13 C18 CLR sing 129 n n C14 C15 CLR sing 130 n n C14 H14 CLR sing 131 n n C15 C16 CLR sing 132 n n C15 H151 CLR sing 133 n n C15 H152 CLR sing 134 n n C16 C17 CLR sing 135 n n C16 H161 CLR sing 136 n n C16 H162 CLR sing 137 n n C17 C20 CLR sing 138 n n C17 H17 CLR sing 139 n n C18 H181 CLR sing 140 n n C18 H182 CLR sing 141 n n C18 H183 CLR sing 142 n n C19 H191 CLR sing 143 n n C19 H192 CLR sing 144 n n C19 H193 CLR sing 145 n n C20 C21 CLR sing 146 n n C20 C22 CLR sing 147 n n C20 H20 CLR sing 148 n n C21 H211 CLR sing 149 n n C21 H212 CLR sing 150 n n C21 H213 CLR sing 151 n n C22 C23 CLR sing 152 n n C22 H221 CLR sing 153 n n C22 H222 CLR sing 154 n n C23 C24 CLR sing 155 n n C23 H231 CLR sing 156 n n C23 H232 CLR sing 157 n n C24 C25 CLR sing 158 n n C24 H241 CLR sing 159 n n C24 H242 CLR sing 160 n n C25 C26 CLR sing 161 n n C25 C27 CLR sing 162 n n C25 H25 CLR sing 163 n n C26 H261 CLR sing 164 n n C26 H262 CLR sing 165 n n C26 H263 CLR sing 166 n n C27 H271 CLR sing 167 n n C27 H272 CLR sing 168 n n C27 H273 CLR sing 169 n n O1 H1 CLR sing 170 n n # _atom_sites.entry_id 8HSI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 L9Q A 1 601 607 L9Q L9Q . F 5 CLR A 1 602 701 CLR CLR . G 5 CLR A 1 603 801 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . F 5 126.26 140.045 110.703 1 20 ? C1 CLR 602 A 1 HETATM 2 C C2 CLR . . . F 5 127.156 140.358 109.501 1 20 ? C2 CLR 602 A 1 HETATM 3 C C3 CLR . . . F 5 128.485 140.924 109.941 1 20 ? C3 CLR 602 A 1 HETATM 4 C C4 CLR . . . F 5 129.122 140.029 110.992 1 20 ? C4 CLR 602 A 1 HETATM 5 C C5 CLR . . . F 5 128.304 139.529 112.067 1 20 ? C5 CLR 602 A 1 HETATM 6 C C6 CLR . . . F 5 128.792 139.532 113.308 1 20 ? C6 CLR 602 A 1 HETATM 7 C C7 CLR . . . F 5 128.006 139.23 114.549 1 20 ? C7 CLR 602 A 1 HETATM 8 C C8 CLR . . . F 5 126.728 138.442 114.257 1 20 ? C8 CLR 602 A 1 HETATM 9 C C9 CLR . . . F 5 126 139.069 113.041 1 20 ? C9 CLR 602 A 1 HETATM 10 C C10 CLR . . . F 5 126.874 139.061 111.737 1 20 ? C10 CLR 602 A 1 HETATM 11 C C11 CLR . . . F 5 124.562 138.527 112.863 1 20 ? C11 CLR 602 A 1 HETATM 12 C C12 CLR . . . F 5 123.738 138.457 114.162 1 20 ? C12 CLR 602 A 1 HETATM 13 C C13 CLR . . . F 5 124.453 137.699 115.293 1 20 ? C13 CLR 602 A 1 HETATM 14 C C14 CLR . . . F 5 125.815 138.415 115.481 1 20 ? C14 CLR 602 A 1 HETATM 15 C C15 CLR . . . F 5 126.355 137.858 116.792 1 20 ? C15 CLR 602 A 1 HETATM 16 C C16 CLR . . . F 5 125.092 137.676 117.655 1 20 ? C16 CLR 602 A 1 HETATM 17 C C17 CLR . . . F 5 123.851 137.854 116.732 1 20 ? C17 CLR 602 A 1 HETATM 18 C C18 CLR . . . F 5 124.573 136.2 114.924 1 20 ? C18 CLR 602 A 1 HETATM 19 C C19 CLR . . . F 5 126.958 137.652 111.105 1 20 ? C19 CLR 602 A 1 HETATM 20 C C20 CLR . . . F 5 122.645 136.989 117.177 1 20 ? C20 CLR 602 A 1 HETATM 21 C C21 CLR . . . F 5 121.463 137.07 116.21 1 20 ? C21 CLR 602 A 1 HETATM 22 C C22 CLR . . . F 5 122.167 137.323 118.607 1 20 ? C22 CLR 602 A 1 HETATM 23 C C23 CLR . . . F 5 121.736 136.116 119.414 1 20 ? C23 CLR 602 A 1 HETATM 24 C C24 CLR . . . F 5 122.481 135.955 120.716 1 20 ? C24 CLR 602 A 1 HETATM 25 C C25 CLR . . . F 5 121.824 135.015 121.731 1 20 ? C25 CLR 602 A 1 HETATM 26 C C26 CLR . . . F 5 120.554 135.623 122.309 1 20 ? C26 CLR 602 A 1 HETATM 27 C C27 CLR . . . F 5 122.787 134.641 122.847 1 20 ? C27 CLR 602 A 1 HETATM 28 O O1 CLR . . . F 5 129.359 141.045 108.81 1 20 ? O1 CLR 602 A 1 HETATM 29 H H11 CLR . . . F 5 126.052 140.89 111.155 1 20 ? H11 CLR 602 A 1 HETATM 30 H H12 CLR . . . F 5 125.417 139.675 110.37 1 20 ? H12 CLR 602 A 1 HETATM 31 H H21 CLR . . . F 5 127.306 139.541 108.981 1 20 ? H21 CLR 602 A 1 HETATM 32 H H22 CLR . . . F 5 126.705 141.007 108.92 1 20 ? H22 CLR 602 A 1 HETATM 33 H H3 CLR . . . F 5 128.339 141.823 110.335 1 20 ? H3 CLR 602 A 1 HETATM 34 H H41 CLR . . . F 5 129.93 140.473 111.323 1 20 ? H41 CLR 602 A 1 HETATM 35 H H42 CLR . . . F 5 129.401 139.192 110.564 1 20 ? H42 CLR 602 A 1 HETATM 36 H H6 CLR . . . F 5 129.706 139.729 113.418 1 20 ? H6 CLR 602 A 1 HETATM 37 H H71 CLR . . . F 5 127.77 140.072 114.99 1 20 ? H71 CLR 602 A 1 HETATM 38 H H72 CLR . . . F 5 128.568 138.714 115.163 1 20 ? H72 CLR 602 A 1 HETATM 39 H H8 CLR . . . F 5 126.985 137.515 114.035 1 20 ? H8 CLR 602 A 1 HETATM 40 H H9 CLR . . . F 5 125.888 140.02 113.279 1 20 ? H9 CLR 602 A 1 HETATM 41 H H111 CLR . . . F 5 124.596 137.635 112.473 1 20 ? H111 CLR 602 A 1 HETATM 42 H H112 CLR . . . F 5 124.085 139.101 112.237 1 20 ? H112 CLR 602 A 1 HETATM 43 H H121 CLR . . . F 5 122.89 138.017 113.968 1 20 ? H121 CLR 602 A 1 HETATM 44 H H122 CLR . . . F 5 123.538 139.367 114.463 1 20 ? H122 CLR 602 A 1 HETATM 45 H H14 CLR . . . F 5 125.599 139.36 115.665 1 20 ? H14 CLR 602 A 1 HETATM 46 H H151 CLR . . . F 5 126.974 138.484 117.207 1 20 ? H151 CLR 602 A 1 HETATM 47 H H152 CLR . . . F 5 126.807 137.009 116.653 1 20 ? H152 CLR 602 A 1 HETATM 48 H H161 CLR . . . F 5 125.074 138.341 118.373 1 20 ? H161 CLR 602 A 1 HETATM 49 H H162 CLR . . . F 5 125.084 136.785 118.06 1 20 ? H162 CLR 602 A 1 HETATM 50 H H17 CLR . . . F 5 123.569 138.795 116.814 1 20 ? H17 CLR 602 A 1 HETATM 51 H H181 CLR . . . F 5 123.704 135.866 114.65 1 20 ? H181 CLR 602 A 1 HETATM 52 H H182 CLR . . . F 5 124.881 135.688 115.692 1 20 ? H182 CLR 602 A 1 HETATM 53 H H183 CLR . . . F 5 125.197 136.079 114.193 1 20 ? H183 CLR 602 A 1 HETATM 54 H H191 CLR . . . F 5 127.684 137.612 110.466 1 20 ? H191 CLR 602 A 1 HETATM 55 H H192 CLR . . . F 5 126.126 137.454 110.647 1 20 ? H192 CLR 602 A 1 HETATM 56 H H193 CLR . . . F 5 127.103 136.99 111.794 1 20 ? H193 CLR 602 A 1 HETATM 57 H H20 CLR . . . F 5 122.946 136.051 117.192 1 20 ? H20 CLR 602 A 1 HETATM 58 H H211 CLR . . . F 5 121.401 137.97 115.846 1 20 ? H211 CLR 602 A 1 HETATM 59 H H212 CLR . . . F 5 120.634 136.855 116.673 1 20 ? H212 CLR 602 A 1 HETATM 60 H H213 CLR . . . F 5 121.59 136.438 115.483 1 20 ? H213 CLR 602 A 1 HETATM 61 H H221 CLR . . . F 5 121.406 137.94 118.547 1 20 ? H221 CLR 602 A 1 HETATM 62 H H222 CLR . . . F 5 122.877 137.777 119.099 1 20 ? H222 CLR 602 A 1 HETATM 63 H H231 CLR . . . F 5 121.87 135.309 118.872 1 20 ? H231 CLR 602 A 1 HETATM 64 H H232 CLR . . . F 5 120.778 136.187 119.606 1 20 ? H232 CLR 602 A 1 HETATM 65 H H241 CLR . . . F 5 122.577 136.839 121.129 1 20 ? H241 CLR 602 A 1 HETATM 66 H H242 CLR . . . F 5 123.381 135.618 120.518 1 20 ? H242 CLR 602 A 1 HETATM 67 H H25 CLR . . . F 5 121.574 134.184 121.255 1 20 ? H25 CLR 602 A 1 HETATM 68 H H261 CLR . . . F 5 120.217 135.054 123.022 1 20 ? H261 CLR 602 A 1 HETATM 69 H H262 CLR . . . F 5 119.882 135.698 121.609 1 20 ? H262 CLR 602 A 1 HETATM 70 H H263 CLR . . . F 5 120.751 136.507 122.665 1 20 ? H263 CLR 602 A 1 HETATM 71 H H271 CLR . . . F 5 122.344 134.04 123.471 1 20 ? H271 CLR 602 A 1 HETATM 72 H H272 CLR . . . F 5 123.067 135.446 123.317 1 20 ? H272 CLR 602 A 1 HETATM 73 H H273 CLR . . . F 5 123.567 134.198 122.469 1 20 ? H273 CLR 602 A 1 HETATM 74 H H1 CLR . . . F 5 130.062 141.451 109.029 1 20 ? H1 CLR 602 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 74 #