data_8HUA # _model_server_result.job_id z11_ABN27sOJ2RPX3NXVNA _model_server_result.datetime_utc '2024-12-08 23:48:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hua # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":203}' # _entry.id 8HUA # _exptl.entry_id 8HUA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 15 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 126.76 _cell.angle_gamma 90 _cell.entry_id 8HUA _cell.length_a 146.06 _cell.length_b 100.17 _cell.length_c 96.62 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HUA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N ? 7 I N N ? 7 J N N ? 7 K N N ? 7 L N N ? 7 M N N ? 7 N N N ? 7 O N N ? 7 P N N ? 7 Q N N ? 7 S N N ? 7 T N N ? 7 U N N ? 7 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 79 A HIS 72 1_555 E FE HEM . A HEM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc2 A ND1 HIS 240 A HIS 233 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc3 A NE2 HIS 289 A HIS 282 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? metalc ? metalc4 A NE2 HIS 290 A HIS 283 1_555 D CU CU . A CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc5 A NE2 HIS 391 A HIS 384 1_555 F FE HAS . A HAS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc6 A NE2 HIS 393 A HIS 386 1_555 E FE HEM . A HEM 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc7 D CU CU . A CU 601 1_555 W O HOH . A HOH 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc8 B ND1 HIS 114 B HIS 114 1_555 R CU2 CUA . B CUA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc9 B SG CYS 149 B CYS 149 1_555 R CU1 CUA . B CUA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc10 B SG CYS 149 B CYS 149 1_555 R CU2 CUA . B CUA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc11 B O GLN 151 B GLN 151 1_555 R CU1 CUA . B CUA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc12 B SG CYS 153 B CYS 153 1_555 R CU1 CUA . B CUA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc13 B SG CYS 153 B CYS 153 1_555 R CU2 CUA . B CUA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc14 B ND1 HIS 157 B HIS 157 1_555 R CU1 CUA . B CUA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? metalc ? metalc15 B SD MET 160 B MET 160 1_555 R CU2 CUA . B CUA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 456 n n C10 C9 OLC doub 457 n n C10 C11 OLC sing 458 n n C9 C8 OLC sing 459 n n C17 C16 OLC sing 460 z n C11 C12 OLC sing 461 n n C8 C7 OLC sing 462 n n C24 C22 OLC sing 463 n n C24 O25 OLC sing 464 n n C16 C15 OLC sing 465 n n C12 C13 OLC sing 466 n n C7 C6 OLC sing 467 n n C15 C14 OLC sing 468 n n C13 C14 OLC sing 469 n n C6 C5 OLC sing 470 n n C5 C4 OLC sing 471 n n C4 C3 OLC sing 472 n n C3 C2 OLC sing 473 n n C2 C1 OLC sing 474 n n C21 C22 OLC sing 475 n n C21 O20 OLC sing 476 n n C1 O19 OLC doub 477 n n C1 O20 OLC sing 478 n n C22 O23 OLC sing 479 n n C18 H18 OLC sing 480 n n C18 H18A OLC sing 481 n n C18 H18B OLC sing 482 n n C10 H10 OLC sing 483 n n C9 H9 OLC sing 484 n n C17 H17 OLC sing 485 n n C17 H17A OLC sing 486 n n C11 H11 OLC sing 487 n n C11 H11A OLC sing 488 n n C8 H8 OLC sing 489 n n C8 H8A OLC sing 490 n n C24 H24 OLC sing 491 n n C24 H24A OLC sing 492 n n C16 H16 OLC sing 493 n n C16 H16A OLC sing 494 n n C12 H12 OLC sing 495 n n C12 H12A OLC sing 496 n n C7 H7 OLC sing 497 n n C7 H7A OLC sing 498 n n C15 H15 OLC sing 499 n n C15 H15A OLC sing 500 n n C13 H13 OLC sing 501 n n C13 H13A OLC sing 502 n n C6 H6 OLC sing 503 n n C6 H6A OLC sing 504 n n C14 H14 OLC sing 505 n n C14 H14A OLC sing 506 n n C5 H5 OLC sing 507 n n C5 H5A OLC sing 508 n n C4 H4 OLC sing 509 n n C4 H4A OLC sing 510 n n C3 H3 OLC sing 511 n n C3 H3A OLC sing 512 n n C2 H2 OLC sing 513 n n C2 H2A OLC sing 514 n n C21 H21 OLC sing 515 n n C21 H21A OLC sing 516 n n C22 H22 OLC sing 517 n n O25 HO25 OLC sing 518 n n O23 HO23 OLC sing 519 n n # _atom_sites.entry_id 8HUA _atom_sites.fract_transf_matrix[1][1] 0.006847 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005114 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012919 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CU A 1 601 601 CU CU . E 5 HEM A 1 602 602 HEM HEM . F 6 HAS A 1 603 603 HAS HAS . G 7 OLC A 1 604 604 OLC OLC . H 7 OLC A 1 605 605 OLC OLC . I 7 OLC A 1 606 606 OLC OLC . J 7 OLC A 1 607 607 OLC OLC . K 7 OLC A 1 608 608 OLC OLC . L 7 OLC A 1 609 609 OLC OLC . M 7 OLC A 1 610 610 OLC OLC . N 7 OLC A 1 611 611 OLC OLC . O 7 OLC A 1 612 613 OLC OLC . P 7 OLC A 1 613 614 OLC OLC . Q 7 OLC B 1 201 612 OLC OLC . R 8 CUA B 1 202 201 CUA CUA . S 7 OLC B 1 203 202 OLC OLC . T 7 OLC C 1 101 101 OLC OLC . U 7 OLC C 1 102 102 OLC OLC . V 7 OLC C 1 103 103 OLC OLC . W 9 HOH A 1 701 82 HOH HOH . W 9 HOH A 2 702 22 HOH HOH . W 9 HOH A 3 703 35 HOH HOH . W 9 HOH A 4 704 86 HOH HOH . W 9 HOH A 5 705 87 HOH HOH . W 9 HOH A 6 706 90 HOH HOH . W 9 HOH A 7 707 55 HOH HOH . W 9 HOH A 8 708 11 HOH HOH . W 9 HOH A 9 709 21 HOH HOH . W 9 HOH A 10 710 28 HOH HOH . W 9 HOH A 11 711 81 HOH HOH . W 9 HOH A 12 712 36 HOH HOH . W 9 HOH A 13 713 71 HOH HOH . W 9 HOH A 14 714 76 HOH HOH . W 9 HOH A 15 715 37 HOH HOH . W 9 HOH A 16 716 4 HOH HOH . W 9 HOH A 17 717 54 HOH HOH . W 9 HOH A 18 718 79 HOH HOH . W 9 HOH A 19 719 65 HOH HOH . W 9 HOH A 20 720 15 HOH HOH . W 9 HOH A 21 721 10 HOH HOH . W 9 HOH A 22 722 33 HOH HOH . W 9 HOH A 23 723 12 HOH HOH . W 9 HOH A 24 724 17 HOH HOH . W 9 HOH A 25 725 50 HOH HOH . W 9 HOH A 26 726 13 HOH HOH . W 9 HOH A 27 727 32 HOH HOH . W 9 HOH A 28 728 6 HOH HOH . W 9 HOH A 29 729 69 HOH HOH . W 9 HOH A 30 730 84 HOH HOH . W 9 HOH A 31 731 51 HOH HOH . W 9 HOH A 32 732 53 HOH HOH . W 9 HOH A 33 733 70 HOH HOH . W 9 HOH A 34 734 16 HOH HOH . W 9 HOH A 35 735 9 HOH HOH . W 9 HOH A 36 736 2 HOH HOH . W 9 HOH A 37 737 85 HOH HOH . W 9 HOH A 38 738 3 HOH HOH . W 9 HOH A 39 739 72 HOH HOH . W 9 HOH A 40 740 47 HOH HOH . W 9 HOH A 41 741 39 HOH HOH . W 9 HOH A 42 742 8 HOH HOH . W 9 HOH A 43 743 91 HOH HOH . W 9 HOH A 44 744 77 HOH HOH . W 9 HOH A 45 745 38 HOH HOH . W 9 HOH A 46 746 5 HOH HOH . W 9 HOH A 47 747 29 HOH HOH . W 9 HOH A 48 748 52 HOH HOH . W 9 HOH A 49 749 24 HOH HOH . W 9 HOH A 50 750 1 HOH HOH . W 9 HOH A 51 751 30 HOH HOH . W 9 HOH A 52 752 68 HOH HOH . W 9 HOH A 53 753 49 HOH HOH . W 9 HOH A 54 754 99 HOH HOH . W 9 HOH A 55 755 100 HOH HOH . W 9 HOH A 56 756 20 HOH HOH . W 9 HOH A 57 757 34 HOH HOH . W 9 HOH A 58 758 119 HOH HOH . W 9 HOH A 59 759 80 HOH HOH . W 9 HOH A 60 760 118 HOH HOH . W 9 HOH A 61 761 108 HOH HOH . W 9 HOH A 62 762 117 HOH HOH . X 9 HOH B 1 301 83 HOH HOH . X 9 HOH B 2 302 58 HOH HOH . X 9 HOH B 3 303 78 HOH HOH . X 9 HOH B 4 304 45 HOH HOH . X 9 HOH B 5 305 97 HOH HOH . X 9 HOH B 6 306 66 HOH HOH . X 9 HOH B 7 307 44 HOH HOH . X 9 HOH B 8 308 27 HOH HOH . X 9 HOH B 9 309 40 HOH HOH . X 9 HOH B 10 310 43 HOH HOH . X 9 HOH B 11 311 114 HOH HOH . X 9 HOH B 12 312 19 HOH HOH . X 9 HOH B 13 313 103 HOH HOH . X 9 HOH B 14 314 75 HOH HOH . X 9 HOH B 15 315 63 HOH HOH . X 9 HOH B 16 316 25 HOH HOH . X 9 HOH B 17 317 26 HOH HOH . X 9 HOH B 18 318 41 HOH HOH . X 9 HOH B 19 319 23 HOH HOH . X 9 HOH B 20 320 60 HOH HOH . X 9 HOH B 21 321 48 HOH HOH . X 9 HOH B 22 322 64 HOH HOH . X 9 HOH B 23 323 104 HOH HOH . X 9 HOH B 24 324 14 HOH HOH . X 9 HOH B 25 325 46 HOH HOH . X 9 HOH B 26 326 56 HOH HOH . X 9 HOH B 27 327 57 HOH HOH . X 9 HOH B 28 328 7 HOH HOH . X 9 HOH B 29 329 74 HOH HOH . X 9 HOH B 30 330 96 HOH HOH . X 9 HOH B 31 331 62 HOH HOH . X 9 HOH B 32 332 61 HOH HOH . X 9 HOH B 33 333 18 HOH HOH . X 9 HOH B 34 334 106 HOH HOH . X 9 HOH B 35 335 59 HOH HOH . X 9 HOH B 36 336 105 HOH HOH . X 9 HOH B 37 337 109 HOH HOH . X 9 HOH B 38 338 42 HOH HOH . X 9 HOH B 39 339 113 HOH HOH . X 9 HOH B 40 340 120 HOH HOH . X 9 HOH B 41 341 101 HOH HOH . Y 9 HOH C 1 201 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . S 7 3.172 -13.655 -4.42 1 85.74 0 C18 OLC 203 B 1 HETATM 2 C C10 OLC . . . S 7 -4.125 -11.427 0.603 1 95.81 0 C10 OLC 203 B 1 HETATM 3 C C9 OLC . . . S 7 -5.295 -11.276 1.209 1 88.86 0 C9 OLC 203 B 1 HETATM 4 C C17 OLC . . . S 7 1.655 -13.81 -4.481 1 89.63 0 C17 OLC 203 B 1 HETATM 5 C C11 OLC . . . S 7 -3.861 -11.369 -0.875 1 90.12 0 C11 OLC 203 B 1 HETATM 6 C C8 OLC . . . S 7 -6.62 -11.221 0.514 1 90.67 0 C8 OLC 203 B 1 HETATM 7 C C24 OLC . . . S 7 -16.789 -12.056 6.104 1 103.07 0 C24 OLC 203 B 1 HETATM 8 C C16 OLC . . . S 7 0.887 -12.558 -4.903 1 89.85 0 C16 OLC 203 B 1 HETATM 9 C C12 OLC . . . S 7 -2.486 -11.844 -1.281 1 92.04 0 C12 OLC 203 B 1 HETATM 10 C C7 OLC . . . S 7 -7.695 -10.443 1.214 1 88.7 0 C7 OLC 203 B 1 HETATM 11 C C15 OLC . . . S 7 -0.616 -12.569 -4.625 1 90.16 0 C15 OLC 203 B 1 HETATM 12 C C13 OLC . . . S 7 -2.347 -12.219 -2.76 1 90.07 0 C13 OLC 203 B 1 HETATM 13 C C6 OLC . . . S 7 -9.035 -11.17 1.252 1 85.95 0 C6 OLC 203 B 1 HETATM 14 C C14 OLC . . . S 7 -1.059 -11.754 -3.416 1 90.25 0 C14 OLC 203 B 1 HETATM 15 C C5 OLC . . . S 7 -10.239 -10.289 1.467 1 82.65 0 C5 OLC 203 B 1 HETATM 16 C C4 OLC . . . S 7 -11.532 -11.066 1.613 1 82.22 0 C4 OLC 203 B 1 HETATM 17 C C3 OLC . . . S 7 -12.117 -11.021 3.015 1 83.84 0 C3 OLC 203 B 1 HETATM 18 C C2 OLC . . . S 7 -13.088 -12.135 3.29 1 90.62 0 C2 OLC 203 B 1 HETATM 19 C C21 OLC . . . S 7 -14.719 -13.535 6.302 1 89.72 0 C21 OLC 203 B 1 HETATM 20 C C1 OLC . . . S 7 -13.273 -12.42 4.762 1 92.6 0 C1 OLC 203 B 1 HETATM 21 C C22 OLC . . . S 7 -16.006 -13.052 6.938 1 96.87 0 C22 OLC 203 B 1 HETATM 22 O O19 OLC . . . S 7 -12.41 -12.256 5.584 1 99.72 0 O19 OLC 203 B 1 HETATM 23 O O25 OLC . . . S 7 -17.953 -11.594 6.787 1 107.38 0 O25 OLC 203 B 1 HETATM 24 O O23 OLC . . . S 7 -16.829 -14.182 7.215 1 98.85 0 O23 OLC 203 B 1 HETATM 25 O O20 OLC . . . S 7 -14.509 -12.846 5.046 1 91.45 0 O20 OLC 203 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 25 #