data_8HUB
#
_model_server_result.job_id            Xo6Jk38UeXGtDqyF7-g0XQ 
_model_server_result.datetime_utc      '2024-10-20 00:46:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8hub 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":902}' 
#
_entry.id    8HUB 
#
_exptl.entry_id    8HUB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              295.379 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,3-dimethyl-4-(phenylmethyl)-2~{H}-quinoxaline-1-carboxamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8HUB 
_cell.length_a            124.516 
_cell.length_b            162.533 
_cell.length_c            289.758 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8HUB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 I N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 217 A HIS 418 1_555 E ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc2 A NE2 HIS 219 A HIS 420 1_555 E ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc3 A NE2 HIS 486 A HIS 687 1_555 E ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc4 B NE2 HIS 217 B HIS 418 1_555 F ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc5 B NE2 HIS 219 B HIS 420 1_555 F ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc6 B NE2 HIS 486 B HIS 687 1_555 F ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc7 B OD1 ASP 563 B ASP 764 1_555 F ZN ZN . B ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? 
metalc ? metalc8 C NE2 HIS 217 C HIS 418 1_555 H ZN ZN . C ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc9 C NE2 HIS 219 C HIS 420 1_555 H ZN ZN . C ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc10 C NE2 HIS 486 C HIS 687 1_555 H ZN ZN . C ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc11 C OD1 ASP 563 C ASP 764 1_555 H ZN ZN . C ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc12 D NE2 HIS 217 D HIS 418 1_555 J ZN ZN . D ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc13 D NE2 HIS 219 D HIS 420 1_555 J ZN ZN . D ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
metalc ? metalc14 D NE2 HIS 486 D HIS 687 1_555 J ZN ZN . D ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc15 D OD1 ASP 563 D ASP 764 1_555 J ZN ZN . D ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? 
#
_chem_comp.formula           'C18 H21 N3 O' 
_chem_comp.formula_weight    295.379 
_chem_comp.id                N4X 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,3-dimethyl-4-(phenylmethyl)-2~{H}-quinoxaline-1-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N22 C13 N4X sing 235 n n 
C1 C4 N4X doub 236 n y 
C1 C5 N4X sing 237 n y 
C4 C2 N4X sing 238 n y 
C13 O14 N4X doub 239 n n 
C13 N10 N4X sing 240 n n 
C5 N10 N4X sing 241 n n 
C5 C6 N4X doub 242 n y 
N10 C9 N4X sing 243 n n 
C2 C3 N4X doub 244 n y 
C9 C8 N4X sing 245 n n 
C6 C3 N4X sing 246 n y 
C6 N7 N4X sing 247 n n 
C8 N7 N4X sing 248 n n 
C8 C11 N4X sing 249 n n 
C8 C12 N4X sing 250 n n 
N7 C15 N4X sing 251 n n 
C15 C16 N4X sing 252 n n 
C21 C16 N4X doub 253 n y 
C21 C20 N4X sing 254 n y 
C16 C17 N4X sing 255 n y 
C20 C19 N4X doub 256 n y 
C17 C18 N4X doub 257 n y 
C19 C18 N4X sing 258 n y 
C1 H11 N4X sing 259 n n 
C2 H21 N4X sing 260 n n 
C3 H31 N4X sing 261 n n 
C4 H41 N4X sing 262 n n 
C9 H92 N4X sing 263 n n 
C9 H91 N4X sing 264 n n 
C11 H111 N4X sing 265 n n 
C11 H112 N4X sing 266 n n 
C11 H113 N4X sing 267 n n 
C12 H121 N4X sing 268 n n 
C12 H122 N4X sing 269 n n 
C12 H123 N4X sing 270 n n 
C15 H152 N4X sing 271 n n 
C15 H151 N4X sing 272 n n 
C17 H171 N4X sing 273 n n 
C18 H181 N4X sing 274 n n 
C19 H191 N4X sing 275 n n 
C20 H201 N4X sing 276 n n 
C21 H211 N4X sing 277 n n 
N22 H222 N4X sing 278 n n 
N22 H221 N4X sing 279 n n 
#
_atom_sites.entry_id                     8HUB 
_atom_sites.fract_transf_matrix[1][1]    0.008031 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006153 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003451 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ZN A 1 1000 1000 ZN ZN . 
F 2 ZN B 1 901 1000 ZN ZN . 
G 3 N4X B 1 902 2000 N4X MOL . 
H 2 ZN C 1 901 1000 ZN ZN . 
I 3 N4X C 1 902 2000 N4X MOL . 
J 2 ZN D 1 901 1000 ZN ZN . 
K 3 N4X D 1 902 2000 N4X MOL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 N4X . . . K 3 92.599 89.442 35.678 1 90.08 ? C1 N4X 902 D 1 
HETATM 2 C C2 N4X . . . K 3 91.194 90.743 34.164 1 92.82 ? C2 N4X 902 D 1 
HETATM 3 C C3 N4X . . . K 3 91.562 89.91 33.096 1 92.5 ? C3 N4X 902 D 1 
HETATM 4 C C4 N4X . . . K 3 91.717 90.509 35.462 1 91.31 ? C4 N4X 902 D 1 
HETATM 5 C C5 N4X . . . K 3 92.981 88.615 34.6 1 89.91 ? C5 N4X 902 D 1 
HETATM 6 C C6 N4X . . . K 3 92.455 88.836 33.305 1 90.96 ? C6 N4X 902 D 1 
HETATM 7 C C8 N4X . . . K 3 93.568 86.735 32.483 1 91.19 ? C8 N4X 902 D 1 
HETATM 8 C C9 N4X . . . K 3 93.526 86.353 33.982 1 90.32 ? C9 N4X 902 D 1 
HETATM 9 C C11 N4X . . . K 3 95.037 86.945 32.109 1 89.48 ? C11 N4X 902 D 1 
HETATM 10 C C12 N4X . . . K 3 92.997 85.556 31.693 1 91.65 ? C12 N4X 902 D 1 
HETATM 11 C C13 N4X . . . K 3 95.095 87.451 35.591 1 87.02 ? C13 N4X 902 D 1 
HETATM 12 C C15 N4X . . . K 3 92.716 88.388 30.802 1 92.79 ? C15 N4X 902 D 1 
HETATM 13 C C16 N4X . . . K 3 91.392 87.915 30.194 1 93.81 ? C16 N4X 902 D 1 
HETATM 14 C C17 N4X . . . K 3 91.317 87.694 28.827 1 94.06 ? C17 N4X 902 D 1 
HETATM 15 C C18 N4X . . . K 3 90.131 87.267 28.25 1 95.37 ? C18 N4X 902 D 1 
HETATM 16 C C19 N4X . . . K 3 89.014 87.059 29.041 1 96.5 ? C19 N4X 902 D 1 
HETATM 17 C C20 N4X . . . K 3 89.086 87.279 30.407 1 95.26 ? C20 N4X 902 D 1 
HETATM 18 C C21 N4X . . . K 3 90.272 87.705 30.985 1 93.81 ? C21 N4X 902 D 1 
HETATM 19 N N10 N4X . . . K 3 93.899 87.468 34.758 1 89.62 ? N10 N4X 902 D 1 
HETATM 20 N N22 N4X . . . K 3 95.45 88.438 36.28 1 86.15 ? N22 N4X 902 D 1 
HETATM 21 N N7 N4X . . . K 3 92.856 87.938 32.183 1 91.76 ? N7 N4X 902 D 1 
HETATM 22 O O14 N4X . . . K 3 95.76 86.47 35.632 1 85.31 ? O14 N4X 902 D 1 
HETATM 23 H H11 N4X . . . K 3 92.987 89.253 36.672 1 108.09 ? H11 N4X 902 D 1 
HETATM 24 H H21 N4X . . . K 3 90.51 91.566 33.997 1 111.38 ? H21 N4X 902 D 1 
HETATM 25 H H31 N4X . . . K 3 91.159 90.091 32.107 1 111 ? H31 N4X 902 D 1 
HETATM 26 H H41 N4X . . . K 3 91.434 91.154 36.285 1 109.58 ? H41 N4X 902 D 1 
HETATM 27 H H92 N4X . . . K 3 92.515 86.064 34.243 1 108.39 ? H92 N4X 902 D 1 
HETATM 28 H H91 N4X . . . K 3 94.229 85.548 34.16 1 108.39 ? H91 N4X 902 D 1 
HETATM 29 H H111 N4X . . . K 3 95.314 87.975 32.297 1 107.37 ? H111 N4X 902 D 1 
HETATM 30 H H112 N4X . . . K 3 95.178 86.72 31.059 1 107.37 ? H112 N4X 902 D 1 
HETATM 31 H H113 N4X . . . K 3 95.659 86.29 32.705 1 107.37 ? H113 N4X 902 D 1 
HETATM 32 H H121 N4X . . . K 3 91.991 85.346 32.034 1 109.98 ? H121 N4X 902 D 1 
HETATM 33 H H122 N4X . . . K 3 93.62 84.683 31.845 1 109.98 ? H122 N4X 902 D 1 
HETATM 34 H H123 N4X . . . K 3 92.975 85.804 30.639 1 109.98 ? H123 N4X 902 D 1 
HETATM 35 H H152 N4X . . . K 3 93.536 87.989 30.216 1 111.35 ? H152 N4X 902 D 1 
HETATM 36 H H151 N4X . . . K 3 92.749 89.47 30.778 1 111.35 ? H151 N4X 902 D 1 
HETATM 37 H H171 N4X . . . K 3 92.19 87.855 28.207 1 112.87 ? H171 N4X 902 D 1 
HETATM 38 H H181 N4X . . . K 3 90.079 87.096 27.182 1 114.44 ? H181 N4X 902 D 1 
HETATM 39 H H191 N4X . . . K 3 88.086 86.725 28.593 1 115.81 ? H191 N4X 902 D 1 
HETATM 40 H H201 N4X . . . K 3 88.212 87.117 31.026 1 114.31 ? H201 N4X 902 D 1 
HETATM 41 H H211 N4X . . . K 3 90.325 87.873 32.053 1 112.58 ? H211 N4X 902 D 1 
HETATM 42 H H222 N4X . . . K 3 96.276 88.375 36.842 1 103.38 ? H222 N4X 902 D 1 
HETATM 43 H H221 N4X . . . K 3 94.921 89.285 36.278 1 103.38 ? H221 N4X 902 D 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#