data_8HV1 # _model_server_result.job_id kSd_YZfw-2dC9ZZ0TLOluA _model_server_result.datetime_utc '2025-09-30 06:19:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hv1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 8HV1 # _exptl.entry_id 8HV1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.489 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HV1 _cell.length_a 144.91 _cell.length_b 144.91 _cell.length_c 144.91 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HV1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 82 A CYS 775 1_555 C S1 N6N . A N6N 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? metalc ? metalc1 A OG SER 206 A SER 899 1_555 D NA NA . A NA 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.871 ? metalc ? metalc2 D NA NA . A NA 1103 1_555 E O HOH . A HOH 1216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc3 D NA NA . A NA 1103 1_555 E O HOH . A HOH 1227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.02 ? metalc ? metalc4 D NA NA . A NA 1103 1_555 E O HOH . A HOH 1241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc5 D NA NA . A NA 1103 1_555 E O HOH . A HOH 1251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? # _chem_comp.formula 'C18 H38 O9' _chem_comp.formula_weight 398.489 _chem_comp.id PE5 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL;POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C48 C50 PE5 sing 257 n n C48 H481 PE5 sing 258 n n C48 H482 PE5 sing 259 n n C48 H483 PE5 sing 260 n n C50 O1 PE5 sing 261 n n C50 H501 PE5 sing 262 n n C50 H502 PE5 sing 263 n n O1 C1 PE5 sing 264 n n C1 C2 PE5 sing 265 n n C1 H11 PE5 sing 266 n n C1 H12 PE5 sing 267 n n C2 O2 PE5 sing 268 n n C2 H21 PE5 sing 269 n n C2 H22 PE5 sing 270 n n O2 C3 PE5 sing 271 n n C3 C4 PE5 sing 272 n n C3 H31 PE5 sing 273 n n C3 H32 PE5 sing 274 n n C4 O3 PE5 sing 275 n n C4 H41 PE5 sing 276 n n C4 H42 PE5 sing 277 n n O3 C5 PE5 sing 278 n n C5 C6 PE5 sing 279 n n C5 H51 PE5 sing 280 n n C5 H52A PE5 sing 281 n n C6 O4 PE5 sing 282 n n C6 H61 PE5 sing 283 n n C6 H62 PE5 sing 284 n n O4 C7 PE5 sing 285 n n C7 C8 PE5 sing 286 n n C7 H71 PE5 sing 287 n n C7 H72 PE5 sing 288 n n C8 O5 PE5 sing 289 n n C8 H81 PE5 sing 290 n n C8 H82 PE5 sing 291 n n O5 C9 PE5 sing 292 n n C9 C10 PE5 sing 293 n n C9 H91 PE5 sing 294 n n C9 H92 PE5 sing 295 n n C10 O6 PE5 sing 296 n n C10 H101 PE5 sing 297 n n C10 H102 PE5 sing 298 n n O6 C11 PE5 sing 299 n n C11 C12 PE5 sing 300 n n C11 H111 PE5 sing 301 n n C11 H112 PE5 sing 302 n n C12 O7 PE5 sing 303 n n C12 H121 PE5 sing 304 n n C12 H122 PE5 sing 305 n n O7 C13 PE5 sing 306 n n C13 C14 PE5 sing 307 n n C13 H131 PE5 sing 308 n n C13 H132 PE5 sing 309 n n C14 O8 PE5 sing 310 n n C14 H141 PE5 sing 311 n n C14 H142 PE5 sing 312 n n O8 C15 PE5 sing 313 n n C15 C16 PE5 sing 314 n n C15 H151 PE5 sing 315 n n C15 H152 PE5 sing 316 n n C16 O52 PE5 sing 317 n n C16 H161 PE5 sing 318 n n C16 H162 PE5 sing 319 n n O52 H52 PE5 sing 320 n n # _atom_sites.entry_id 8HV1 _atom_sites.fract_transf_matrix[1][1] 0.006901 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006901 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006901 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PE5 A 1 1101 2020 PE5 PE5 . C 3 N6N A 1 1102 2021 N6N UNL . D 4 NA A 1 1103 2022 NA NA . E 5 HOH A 1 1201 3048 HOH HOH . E 5 HOH A 2 1202 3062 HOH HOH . E 5 HOH A 3 1203 3021 HOH HOH . E 5 HOH A 4 1204 3046 HOH HOH . E 5 HOH A 5 1205 3054 HOH HOH . E 5 HOH A 6 1206 3017 HOH HOH . E 5 HOH A 7 1207 3010 HOH HOH . E 5 HOH A 8 1208 3012 HOH HOH . E 5 HOH A 9 1209 3011 HOH HOH . E 5 HOH A 10 1210 3005 HOH HOH . E 5 HOH A 11 1211 3059 HOH HOH . E 5 HOH A 12 1212 3006 HOH HOH . E 5 HOH A 13 1213 3032 HOH HOH . E 5 HOH A 14 1214 3002 HOH HOH . E 5 HOH A 15 1215 3015 HOH HOH . E 5 HOH A 16 1216 3007 HOH HOH . E 5 HOH A 17 1217 3013 HOH HOH . E 5 HOH A 18 1218 3052 HOH HOH . E 5 HOH A 19 1219 3009 HOH HOH . E 5 HOH A 20 1220 3040 HOH HOH . E 5 HOH A 21 1221 3055 HOH HOH . E 5 HOH A 22 1222 3057 HOH HOH . E 5 HOH A 23 1223 3042 HOH HOH . E 5 HOH A 24 1224 3004 HOH HOH . E 5 HOH A 25 1225 3014 HOH HOH . E 5 HOH A 26 1226 3025 HOH HOH . E 5 HOH A 27 1227 3001 HOH HOH . E 5 HOH A 28 1228 3028 HOH HOH . E 5 HOH A 29 1229 3020 HOH HOH . E 5 HOH A 30 1230 3008 HOH HOH . E 5 HOH A 31 1231 3051 HOH HOH . E 5 HOH A 32 1232 3039 HOH HOH . E 5 HOH A 33 1233 3003 HOH HOH . E 5 HOH A 34 1234 3060 HOH HOH . E 5 HOH A 35 1235 3030 HOH HOH . E 5 HOH A 36 1236 3023 HOH HOH . E 5 HOH A 37 1237 3033 HOH HOH . E 5 HOH A 38 1238 3034 HOH HOH . E 5 HOH A 39 1239 3027 HOH HOH . E 5 HOH A 40 1240 3019 HOH HOH . E 5 HOH A 41 1241 3035 HOH HOH . E 5 HOH A 42 1242 3022 HOH HOH . E 5 HOH A 43 1243 3018 HOH HOH . E 5 HOH A 44 1244 3061 HOH HOH . E 5 HOH A 45 1245 3045 HOH HOH . E 5 HOH A 46 1246 3016 HOH HOH . E 5 HOH A 47 1247 3072 HOH HOH . E 5 HOH A 48 1248 3044 HOH HOH . E 5 HOH A 49 1249 3043 HOH HOH . E 5 HOH A 50 1250 3049 HOH HOH . E 5 HOH A 51 1251 3024 HOH HOH . E 5 HOH A 52 1252 3070 HOH HOH . E 5 HOH A 53 1253 3069 HOH HOH . E 5 HOH A 54 1254 3067 HOH HOH . E 5 HOH A 55 1255 3029 HOH HOH . E 5 HOH A 56 1256 3041 HOH HOH . E 5 HOH A 57 1257 3047 HOH HOH . E 5 HOH A 58 1258 3053 HOH HOH . E 5 HOH A 59 1259 3071 HOH HOH . E 5 HOH A 60 1260 3066 HOH HOH . E 5 HOH A 61 1261 3065 HOH HOH . E 5 HOH A 62 1262 3058 HOH HOH . E 5 HOH A 63 1263 3068 HOH HOH . E 5 HOH A 64 1264 3036 HOH HOH . E 5 HOH A 65 1265 3064 HOH HOH . E 5 HOH A 66 1266 3056 HOH HOH . E 5 HOH A 67 1267 3050 HOH HOH . E 5 HOH A 68 1268 3031 HOH HOH . E 5 HOH A 69 1269 3037 HOH HOH . E 5 HOH A 70 1270 3038 HOH HOH . E 5 HOH A 71 1271 3026 HOH HOH . E 5 HOH A 72 1272 3063 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C48 PE5 . . . B 2 6.783 -18.588 -73.308 0.5 136.53 ? C48 PE5 1101 A 1 HETATM 2 C C50 PE5 . . . B 2 6.19 -17.248 -73.453 0.5 139.99 ? C50 PE5 1101 A 1 HETATM 3 O O1 PE5 . . . B 2 4.783 -17.348 -73.648 0.5 147 ? O1 PE5 1101 A 1 HETATM 4 C C1 PE5 . . . B 2 4.06 -16.201 -73.202 0.5 142.57 ? C1 PE5 1101 A 1 HETATM 5 C C2 PE5 . . . B 2 2.713 -16.129 -73.886 0.5 135.87 ? C2 PE5 1101 A 1 HETATM 6 O O2 PE5 . . . B 2 2.247 -17.446 -74.162 0.5 124.12 ? O2 PE5 1101 A 1 HETATM 7 C C3 PE5 . . . B 2 1.158 -17.503 -75.075 0.5 96.93 ? C3 PE5 1101 A 1 HETATM 8 C C4 PE5 . . . B 2 0.956 -18.93 -75.499 0.5 86.91 ? C4 PE5 1101 A 1 HETATM 9 O O3 PE5 . . . B 2 0.495 -19.7 -74.391 0.5 78.71 ? O3 PE5 1101 A 1 HETATM 10 C C5 PE5 . . . B 2 0.783 -21.09 -74.486 0.5 72 ? C5 PE5 1101 A 1 HETATM 11 C C6 PE5 . . . B 2 0.42 -21.794 -73.197 0.5 69.57 ? C6 PE5 1101 A 1 HETATM 12 O O4 PE5 . . . B 2 -0.244 -20.899 -72.308 0.5 66.97 ? O4 PE5 1101 A 1 HETATM 13 C C7 PE5 . . . B 2 -1.111 -21.561 -71.393 0.5 60.34 ? C7 PE5 1101 A 1 HETATM 14 C C8 PE5 . . . B 2 -1.002 -20.956 -70.013 0.5 53.85 ? C8 PE5 1101 A 1 HETATM 15 O O5 PE5 . . . B 2 -0.829 -19.549 -70.098 0.5 49.03 ? O5 PE5 1101 A 1 HETATM 16 C C9 PE5 . . . B 2 -1.809 -18.795 -69.398 0.5 54.48 ? C9 PE5 1101 A 1 HETATM 17 C C10 PE5 . . . B 2 -2.082 -17.524 -70.128 0.5 63.19 ? C10 PE5 1101 A 1 HETATM 18 O O6 PE5 . . . B 2 -3.413 -17.565 -70.644 0.5 75.93 ? O6 PE5 1101 A 1 HETATM 19 C C11 PE5 . . . B 2 -3.836 -16.342 -71.251 0.5 75.72 ? C11 PE5 1101 A 1 HETATM 20 C C12 PE5 . . . B 2 -5.24 -16.491 -71.797 0.5 66.37 ? C12 PE5 1101 A 1 HETATM 21 O O7 PE5 . . . B 2 -6.085 -17.051 -70.795 0.5 58.32 ? O7 PE5 1101 A 1 HETATM 22 C C13 PE5 . . . B 2 -7.269 -17.642 -71.315 0.5 55.92 ? C13 PE5 1101 A 1 HETATM 23 C C14 PE5 . . . B 2 -6.972 -19.05 -71.726 0.5 57.44 ? C14 PE5 1101 A 1 HETATM 24 O O8 PE5 . . . B 2 -7.199 -19.222 -73.122 0.5 61.9 ? O8 PE5 1101 A 1 HETATM 25 C C15 PE5 . . . B 2 -7.763 -18.086 -73.773 0.5 64.32 ? C15 PE5 1101 A 1 HETATM 26 C C16 PE5 . . . B 2 -8.984 -18.493 -74.566 0.5 59.81 ? C16 PE5 1101 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #