data_8HV7 # _model_server_result.job_id D_SDeXpei-KCJijBo-2DKA _model_server_result.datetime_utc '2024-11-26 13:08:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 8HV7 # _exptl.entry_id 8HV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.489 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HV7 _cell.length_a 144.874 _cell.length_b 144.874 _cell.length_c 144.874 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 82 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 775 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id C14 _struct_conn.ptnr2_label_comp_id N8O _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id N8O _struct_conn.ptnr2_auth_seq_id 1102 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.836 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C18 H38 O9' _chem_comp.formula_weight 398.489 _chem_comp.id PE5 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL;POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C48 C50 PE5 sing 280 n n C48 H481 PE5 sing 281 n n C48 H482 PE5 sing 282 n n C48 H483 PE5 sing 283 n n C50 O1 PE5 sing 284 n n C50 H501 PE5 sing 285 n n C50 H502 PE5 sing 286 n n O1 C1 PE5 sing 287 n n C1 C2 PE5 sing 288 n n C1 H11 PE5 sing 289 n n C1 H12 PE5 sing 290 n n C2 O2 PE5 sing 291 n n C2 H21 PE5 sing 292 n n C2 H22 PE5 sing 293 n n O2 C3 PE5 sing 294 n n C3 C4 PE5 sing 295 n n C3 H31 PE5 sing 296 n n C3 H32 PE5 sing 297 n n C4 O3 PE5 sing 298 n n C4 H41 PE5 sing 299 n n C4 H42 PE5 sing 300 n n O3 C5 PE5 sing 301 n n C5 C6 PE5 sing 302 n n C5 H51 PE5 sing 303 n n C5 H52A PE5 sing 304 n n C6 O4 PE5 sing 305 n n C6 H61 PE5 sing 306 n n C6 H62 PE5 sing 307 n n O4 C7 PE5 sing 308 n n C7 C8 PE5 sing 309 n n C7 H71 PE5 sing 310 n n C7 H72 PE5 sing 311 n n C8 O5 PE5 sing 312 n n C8 H81 PE5 sing 313 n n C8 H82 PE5 sing 314 n n O5 C9 PE5 sing 315 n n C9 C10 PE5 sing 316 n n C9 H91 PE5 sing 317 n n C9 H92 PE5 sing 318 n n C10 O6 PE5 sing 319 n n C10 H101 PE5 sing 320 n n C10 H102 PE5 sing 321 n n O6 C11 PE5 sing 322 n n C11 C12 PE5 sing 323 n n C11 H111 PE5 sing 324 n n C11 H112 PE5 sing 325 n n C12 O7 PE5 sing 326 n n C12 H121 PE5 sing 327 n n C12 H122 PE5 sing 328 n n O7 C13 PE5 sing 329 n n C13 C14 PE5 sing 330 n n C13 H131 PE5 sing 331 n n C13 H132 PE5 sing 332 n n C14 O8 PE5 sing 333 n n C14 H141 PE5 sing 334 n n C14 H142 PE5 sing 335 n n O8 C15 PE5 sing 336 n n C15 C16 PE5 sing 337 n n C15 H151 PE5 sing 338 n n C15 H152 PE5 sing 339 n n C16 O52 PE5 sing 340 n n C16 H161 PE5 sing 341 n n C16 H162 PE5 sing 342 n n O52 H52 PE5 sing 343 n n # _atom_sites.entry_id 8HV7 _atom_sites.fract_transf_matrix[1][1] 0.006903 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PE5 A 1 1101 2020 PE5 PE5 . C 3 N8O A 1 1102 2021 N8O UNL . D 4 DMS A 1 1103 2022 DMS DMS . E 5 HOH A 1 1201 3008 HOH HOH . E 5 HOH A 2 1202 3004 HOH HOH . E 5 HOH A 3 1203 3003 HOH HOH . E 5 HOH A 4 1204 3063 HOH HOH . E 5 HOH A 5 1205 3030 HOH HOH . E 5 HOH A 6 1206 3025 HOH HOH . E 5 HOH A 7 1207 3027 HOH HOH . E 5 HOH A 8 1208 3022 HOH HOH . E 5 HOH A 9 1209 3065 HOH HOH . E 5 HOH A 10 1210 3040 HOH HOH . E 5 HOH A 11 1211 3090 HOH HOH . E 5 HOH A 12 1212 3034 HOH HOH . E 5 HOH A 13 1213 3019 HOH HOH . E 5 HOH A 14 1214 3026 HOH HOH . E 5 HOH A 15 1215 3055 HOH HOH . E 5 HOH A 16 1216 3032 HOH HOH . E 5 HOH A 17 1217 3086 HOH HOH . E 5 HOH A 18 1218 3028 HOH HOH . E 5 HOH A 19 1219 3051 HOH HOH . E 5 HOH A 20 1220 3068 HOH HOH . E 5 HOH A 21 1221 3077 HOH HOH . E 5 HOH A 22 1222 3012 HOH HOH . E 5 HOH A 23 1223 3067 HOH HOH . E 5 HOH A 24 1224 3088 HOH HOH . E 5 HOH A 25 1225 3071 HOH HOH . E 5 HOH A 26 1226 3087 HOH HOH . E 5 HOH A 27 1227 3023 HOH HOH . E 5 HOH A 28 1228 3014 HOH HOH . E 5 HOH A 29 1229 3062 HOH HOH . E 5 HOH A 30 1230 3064 HOH HOH . E 5 HOH A 31 1231 3054 HOH HOH . E 5 HOH A 32 1232 3070 HOH HOH . E 5 HOH A 33 1233 3010 HOH HOH . E 5 HOH A 34 1234 3006 HOH HOH . E 5 HOH A 35 1235 3009 HOH HOH . E 5 HOH A 36 1236 3013 HOH HOH . E 5 HOH A 37 1237 3005 HOH HOH . E 5 HOH A 38 1238 3072 HOH HOH . E 5 HOH A 39 1239 3043 HOH HOH . E 5 HOH A 40 1240 3037 HOH HOH . E 5 HOH A 41 1241 3052 HOH HOH . E 5 HOH A 42 1242 3024 HOH HOH . E 5 HOH A 43 1243 3039 HOH HOH . E 5 HOH A 44 1244 3084 HOH HOH . E 5 HOH A 45 1245 3015 HOH HOH . E 5 HOH A 46 1246 3080 HOH HOH . E 5 HOH A 47 1247 3050 HOH HOH . E 5 HOH A 48 1248 3069 HOH HOH . E 5 HOH A 49 1249 3085 HOH HOH . E 5 HOH A 50 1250 3007 HOH HOH . E 5 HOH A 51 1251 3011 HOH HOH . E 5 HOH A 52 1252 3016 HOH HOH . E 5 HOH A 53 1253 3058 HOH HOH . E 5 HOH A 54 1254 3033 HOH HOH . E 5 HOH A 55 1255 3001 HOH HOH . E 5 HOH A 56 1256 3078 HOH HOH . E 5 HOH A 57 1257 3029 HOH HOH . E 5 HOH A 58 1258 3083 HOH HOH . E 5 HOH A 59 1259 3018 HOH HOH . E 5 HOH A 60 1260 3075 HOH HOH . E 5 HOH A 61 1261 3048 HOH HOH . E 5 HOH A 62 1262 3041 HOH HOH . E 5 HOH A 63 1263 3079 HOH HOH . E 5 HOH A 64 1264 3042 HOH HOH . E 5 HOH A 65 1265 3035 HOH HOH . E 5 HOH A 66 1266 3049 HOH HOH . E 5 HOH A 67 1267 3057 HOH HOH . E 5 HOH A 68 1268 3073 HOH HOH . E 5 HOH A 69 1269 3061 HOH HOH . E 5 HOH A 70 1270 3020 HOH HOH . E 5 HOH A 71 1271 3017 HOH HOH . E 5 HOH A 72 1272 3038 HOH HOH . E 5 HOH A 73 1273 3036 HOH HOH . E 5 HOH A 74 1274 3046 HOH HOH . E 5 HOH A 75 1275 3053 HOH HOH . E 5 HOH A 76 1276 3044 HOH HOH . E 5 HOH A 77 1277 3045 HOH HOH . E 5 HOH A 78 1278 3056 HOH HOH . E 5 HOH A 79 1279 3031 HOH HOH . E 5 HOH A 80 1280 3081 HOH HOH . E 5 HOH A 81 1281 3047 HOH HOH . E 5 HOH A 82 1282 3066 HOH HOH . E 5 HOH A 83 1283 3089 HOH HOH . E 5 HOH A 84 1284 3074 HOH HOH . E 5 HOH A 85 1285 3082 HOH HOH . E 5 HOH A 86 1286 3059 HOH HOH . E 5 HOH A 87 1287 3060 HOH HOH . E 5 HOH A 88 1288 3002 HOH HOH . E 5 HOH A 89 1289 3021 HOH HOH . E 5 HOH A 90 1290 3076 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C48 PE5 . . . B 2 0.695 79.43 -53.723 0.5 130.86 ? C48 PE5 1101 A 1 HETATM 2 C C50 PE5 . . . B 2 0.633 79.323 -55.187 0.5 132.69 ? C50 PE5 1101 A 1 HETATM 3 O O1 PE5 . . . B 2 1.415 78.228 -55.648 0.5 137.75 ? O1 PE5 1101 A 1 HETATM 4 C C1 PE5 . . . B 2 0.633 77.089 -55.99 0.5 137.58 ? C1 PE5 1101 A 1 HETATM 5 C C2 PE5 . . . B 2 1.521 76.009 -56.527 0.5 132.18 ? C2 PE5 1101 A 1 HETATM 6 O O2 PE5 . . . B 2 1.29 74.797 -55.819 0.5 116.2 ? O2 PE5 1101 A 1 HETATM 7 C C3 PE5 . . . B 2 2.477 74.251 -55.254 0.5 94.06 ? C3 PE5 1101 A 1 HETATM 8 C C4 PE5 . . . B 2 2.487 74.485 -53.777 0.5 79.84 ? C4 PE5 1101 A 1 HETATM 9 O O3 PE5 . . . B 2 2.066 73.303 -53.107 0.5 65.9 ? O3 PE5 1101 A 1 HETATM 10 C C5 PE5 . . . B 2 2.102 73.428 -51.691 0.5 57.58 ? C5 PE5 1101 A 1 HETATM 11 C C6 PE5 . . . B 2 0.727 73.238 -51.135 0.5 53.88 ? C6 PE5 1101 A 1 HETATM 12 O O4 PE5 . . . B 2 0.094 72.144 -51.789 0.5 49.24 ? O4 PE5 1101 A 1 HETATM 13 C C7 PE5 . . . B 2 -1.205 71.871 -51.276 0.5 43.76 ? C7 PE5 1101 A 1 HETATM 14 C C8 PE5 . . . B 2 -2.194 71.869 -52.396 0.5 40.87 ? C8 PE5 1101 A 1 HETATM 15 O O5 PE5 . . . B 2 -2.196 70.594 -53.026 0.5 38.42 ? O5 PE5 1101 A 1 HETATM 16 C C9 PE5 . . . B 2 -2.837 70.607 -54.296 0.5 39.58 ? C9 PE5 1101 A 1 HETATM 17 C C10 PE5 . . . B 2 -2.096 71.519 -55.22 0.5 41.23 ? C10 PE5 1101 A 1 HETATM 18 O O6 PE5 . . . B 2 -1.106 70.781 -55.926 0.5 42.47 ? O6 PE5 1101 A 1 HETATM 19 C C11 PE5 . . . B 2 -1.642 69.661 -56.62 0.5 42.34 ? C11 PE5 1101 A 1 HETATM 20 C C12 PE5 . . . B 2 -0.695 68.506 -56.522 0.5 41.59 ? C12 PE5 1101 A 1 HETATM 21 O O7 PE5 . . . B 2 -1.275 67.477 -55.729 0.5 38.04 ? O7 PE5 1101 A 1 HETATM 22 C C13 PE5 . . . B 2 -0.609 66.228 -55.87 0.5 32.25 ? C13 PE5 1101 A 1 HETATM 23 C C14 PE5 . . . B 2 -1.101 65.276 -54.828 0.5 29.6 ? C14 PE5 1101 A 1 HETATM 24 O O8 PE5 . . . B 2 -0.2 65.268 -53.726 0.5 26.75 ? O8 PE5 1101 A 1 HETATM 25 C C15 PE5 . . . B 2 -0.776 65.798 -52.539 0.5 24.91 ? C15 PE5 1101 A 1 HETATM 26 C C16 PE5 . . . B 2 -0.701 67.292 -52.556 0.5 22.79 ? C16 PE5 1101 A 1 # _model_server_stats.io_time_ms 89 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #