data_8HVI # _model_server_result.job_id izmgEsU096lUB_chBWnhJA _model_server_result.datetime_utc '2024-10-11 00:31:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hvi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 8HVI # _exptl.entry_id 8HVI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 351.353 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-methyl-5-[(4-oxidanylidene-4-phenyl-butanoyl)amino]-1-benzofuran-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HVI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HVI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 22 H CYS 22 1_555 E SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 E SG CYS 159 H CYS 147 1_555 E SG CYS 229 H CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? # _chem_comp.formula 'C20 H17 N O5' _chem_comp.formula_weight 351.353 _chem_comp.id NFI _chem_comp.mon_nstd_flag . _chem_comp.name '3-methyl-5-[(4-oxidanylidene-4-phenyl-butanoyl)amino]-1-benzofuran-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O5 C20 NFI doub 235 n n C20 O4 NFI sing 236 n n C20 C17 NFI sing 237 n n C17 C18 NFI doub 238 n y C17 O3 NFI sing 239 n y C19 C18 NFI sing 240 n n C18 C15 NFI sing 241 n y O3 C14 NFI sing 242 n y C15 C14 NFI doub 243 n y C15 C16 NFI sing 244 n y C14 C13 NFI sing 245 n y C16 C11 NFI doub 246 n y C13 C12 NFI doub 247 n y O2 C10 NFI doub 248 n n C11 C12 NFI sing 249 n y C11 N1 NFI sing 250 n n C10 N1 NFI sing 251 n n C10 C9 NFI sing 252 n n C9 C8 NFI sing 253 n n C8 C7 NFI sing 254 n n O1 C7 NFI doub 255 n n C7 C5 NFI sing 256 n n C5 C6 NFI doub 257 n y C5 C4 NFI sing 258 n y C6 C1 NFI sing 259 n y C4 C3 NFI doub 260 n y C1 C2 NFI doub 261 n y C3 C2 NFI sing 262 n y N1 H1 NFI sing 263 n n C4 H2 NFI sing 264 n n C6 H3 NFI sing 265 n n C8 H4 NFI sing 266 n n C8 H5 NFI sing 267 n n C13 H6 NFI sing 268 n n C1 H7 NFI sing 269 n n C2 H8 NFI sing 270 n n C3 H9 NFI sing 271 n n C9 H10 NFI sing 272 n n C9 H11 NFI sing 273 n n C12 H12 NFI sing 274 n n C16 H13 NFI sing 275 n n C19 H14 NFI sing 276 n n C19 H15 NFI sing 277 n n C19 H16 NFI sing 278 n n O4 H17 NFI sing 279 n n # _atom_sites.entry_id 8HVI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id NFI _pdbx_nonpoly_scheme.pdb_strand_id R _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id NFI _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 NFI . . . F 6 59.873 79.959 127.352 1 0.5 ? N1 NFI 401 R 1 HETATM 2 C C4 NFI . . . F 6 57.42 81.627 132.228 1 0.5 ? C4 NFI 401 R 1 HETATM 3 C C5 NFI . . . F 6 57.253 80.515 131.411 1 0.5 ? C5 NFI 401 R 1 HETATM 4 C C6 NFI . . . F 6 56.472 79.459 131.866 1 0.5 ? C6 NFI 401 R 1 HETATM 5 C C7 NFI . . . F 6 57.902 80.458 130.071 1 0.5 ? C7 NFI 401 R 1 HETATM 6 C C8 NFI . . . F 6 57.033 80.28 128.852 1 0.5 ? C8 NFI 401 R 1 HETATM 7 C C10 NFI . . . F 6 58.598 79.928 126.911 1 0.5 ? C10 NFI 401 R 1 HETATM 8 C C13 NFI . . . F 6 62.718 81.764 125.836 1 0.5 ? C13 NFI 401 R 1 HETATM 9 C C15 NFI . . . F 6 62.705 79.447 125.079 1 0.5 ? C15 NFI 401 R 1 HETATM 10 C C17 NFI . . . F 6 64.517 79.528 123.763 1 0.5 ? C17 NFI 401 R 1 HETATM 11 C C20 NFI . . . F 6 65.673 79.347 122.851 1 0.5 ? C20 NFI 401 R 1 HETATM 12 C C1 NFI . . . F 6 55.872 79.52 133.112 1 0.5 ? C1 NFI 401 R 1 HETATM 13 C C2 NFI . . . F 6 56.044 80.626 133.911 1 0.5 ? C2 NFI 401 R 1 HETATM 14 C C3 NFI . . . F 6 56.815 81.677 133.473 1 0.5 ? C3 NFI 401 R 1 HETATM 15 O O1 NFI . . . F 6 59.111 80.554 129.968 1 0.5 ? O1 NFI 401 R 1 HETATM 16 C C9 NFI . . . F 6 57.671 80.89 127.61 1 0.5 ? C9 NFI 401 R 1 HETATM 17 O O2 NFI . . . F 6 58.216 79.173 126.016 1 0.5 ? O2 NFI 401 R 1 HETATM 18 C C11 NFI . . . F 6 61.027 80.204 126.575 1 0.5 ? C11 NFI 401 R 1 HETATM 19 C C12 NFI . . . F 6 61.588 81.485 126.581 1 0.5 ? C12 NFI 401 R 1 HETATM 20 C C14 NFI . . . F 6 63.246 80.725 125.101 1 0.5 ? C14 NFI 401 R 1 HETATM 21 C C16 NFI . . . F 6 61.569 79.179 125.833 1 0.5 ? C16 NFI 401 R 1 HETATM 22 O O3 NFI . . . F 6 64.355 80.794 124.302 1 0.5 ? O3 NFI 401 R 1 HETATM 23 C C18 NFI . . . F 6 63.547 78.678 124.201 1 0.5 ? C18 NFI 401 R 1 HETATM 24 C C19 NFI . . . F 6 63.356 77.237 123.867 1 0.5 ? C19 NFI 401 R 1 HETATM 25 O O4 NFI . . . F 6 66.79 79.784 123.235 1 0.5 ? O4 NFI 401 R 1 HETATM 26 O O5 NFI . . . F 6 65.466 78.766 121.753 1 0.5 -1 O5 NFI 401 R 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #