data_8HVW
#
_model_server_result.job_id            RgIcwWt3vCVhnAh1Y3o4TA 
_model_server_result.datetime_utc      '2024-11-21 17:13:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8hvw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    8HVW 
#
_exptl.entry_id    8HVW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              552.514 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(3~{S})-3-[[(2~{S})-2-[(4-methoxy-1~{H}-indol-2-yl)carbonylamino]-4-methyl-pentanoyl]amino]-2-oxidanylidene-4-[(3~{R})-2-oxidanylidene-3,4-dihydropyrrol-3-yl]butyl] dihydrogen phosphate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.941 
_cell.angle_gamma         90 
_cell.entry_id            8HVW 
_cell.length_a            55.13 
_cell.length_b            99.23 
_cell.length_c            59.64 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8HVW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C24 H33 N4 O9 P' 
_chem_comp.formula_weight    552.514 
_chem_comp.id                80I 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(3~{S})-3-[[(2~{S})-2-[(4-methoxy-1~{H}-indol-2-yl)carbonylamino]-4-methyl-pentanoyl]amino]-2-oxidanylidene-4-[(3~{R})-2-oxidanylidene-3,4-dihydropyrrol-3-yl]butyl] dihydrogen phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N22 C23 80I sing 1 n n 
N22 C21 80I sing 2 n n 
C23 C24 80I sing 3 n n 
C21 O25 80I doub 4 n n 
C21 C20 80I sing 5 n n 
C24 C20 80I sing 6 n n 
C20 C19 80I sing 7 n n 
C08 C09 80I doub 8 n y 
C08 C07 80I sing 9 n y 
C09 C10 80I sing 10 n y 
C19 C18 80I sing 11 n n 
C07 N04 80I sing 12 n y 
C07 C06 80I doub 13 n y 
C10 C11 80I doub 14 n y 
N04 C03 80I sing 15 n y 
O31 P29 80I doub 16 n n 
C18 C26 80I sing 17 n n 
C18 N17 80I sing 18 n n 
O32 P29 80I sing 19 n n 
C06 C11 80I sing 20 n y 
C06 C05 80I sing 21 n y 
C11 O12 80I sing 22 n n 
O33 C26 80I doub 23 n n 
O01 C02 80I doub 24 n n 
C03 C02 80I sing 25 n n 
C03 C05 80I doub 26 n y 
C26 C27 80I sing 27 n n 
C02 N14 80I sing 28 n n 
P29 O28 80I sing 29 n n 
P29 O30 80I sing 30 n n 
O34 C16 80I doub 31 n n 
N17 C16 80I sing 32 n n 
O12 C13 80I sing 33 n n 
C16 C15 80I sing 34 n n 
O28 C27 80I sing 35 n n 
N14 C15 80I sing 36 n n 
C15 C35 80I sing 37 n n 
C35 C36 80I sing 38 n n 
C36 C38 80I sing 39 n n 
C36 C37 80I sing 40 n n 
C10 H1 80I sing 41 n n 
C13 H2 80I sing 42 n n 
C13 H3 80I sing 43 n n 
C13 H4 80I sing 44 n n 
C15 H5 80I sing 45 n n 
C20 H6 80I sing 46 n n 
C24 H7 80I sing 47 n n 
C24 H8 80I sing 48 n n 
C05 H9 80I sing 49 n n 
C08 H10 80I sing 50 n n 
C09 H11 80I sing 51 n n 
C18 H12 80I sing 52 n n 
C19 H13 80I sing 53 n n 
C19 H14 80I sing 54 n n 
C23 H15 80I sing 55 n n 
C27 H16 80I sing 56 n n 
C27 H17 80I sing 57 n n 
C35 H18 80I sing 58 n n 
C35 H19 80I sing 59 n n 
C36 H20 80I sing 60 n n 
C37 H21 80I sing 61 n n 
C37 H22 80I sing 62 n n 
C37 H23 80I sing 63 n n 
C38 H24 80I sing 64 n n 
C38 H25 80I sing 65 n n 
C38 H26 80I sing 66 n n 
N04 H27 80I sing 67 n n 
N14 H28 80I sing 68 n n 
N17 H29 80I sing 69 n n 
O30 H30 80I sing 70 n n 
O32 H31 80I sing 71 n n 
N22 H32 80I sing 72 n n 
C23 H33 80I sing 73 n n 
#
_atom_sites.entry_id                     8HVW 
_atom_sites.fract_transf_matrix[1][1]    0.018139 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005873 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010078 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017624 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 80I A 1 401 1 80I LIG . 
D 2 80I B 1 401 2 80I LIG . 
E 3 HOH A 1 501 38 HOH HOH . 
E 3 HOH A 2 502 32 HOH HOH . 
E 3 HOH A 3 503 12 HOH HOH . 
E 3 HOH A 4 504 31 HOH HOH . 
E 3 HOH A 5 505 5 HOH HOH . 
E 3 HOH A 6 506 25 HOH HOH . 
E 3 HOH A 7 507 28 HOH HOH . 
E 3 HOH A 8 508 27 HOH HOH . 
E 3 HOH A 9 509 16 HOH HOH . 
E 3 HOH A 10 510 2 HOH HOH . 
E 3 HOH A 11 511 41 HOH HOH . 
E 3 HOH A 12 512 9 HOH HOH . 
E 3 HOH A 13 513 3 HOH HOH . 
E 3 HOH A 14 514 48 HOH HOH . 
E 3 HOH A 15 515 49 HOH HOH . 
E 3 HOH A 16 516 7 HOH HOH . 
E 3 HOH A 17 517 11 HOH HOH . 
E 3 HOH A 18 518 43 HOH HOH . 
E 3 HOH A 19 519 44 HOH HOH . 
E 3 HOH A 20 520 40 HOH HOH . 
E 3 HOH A 21 521 30 HOH HOH . 
E 3 HOH A 22 522 19 HOH HOH . 
E 3 HOH A 23 523 42 HOH HOH . 
E 3 HOH A 24 524 46 HOH HOH . 
E 3 HOH A 25 525 14 HOH HOH . 
E 3 HOH A 26 526 52 HOH HOH . 
E 3 HOH A 27 527 47 HOH HOH . 
F 3 HOH B 1 501 35 HOH HOH . 
F 3 HOH B 2 502 20 HOH HOH . 
F 3 HOH B 3 503 51 HOH HOH . 
F 3 HOH B 4 504 8 HOH HOH . 
F 3 HOH B 5 505 1 HOH HOH . 
F 3 HOH B 6 506 21 HOH HOH . 
F 3 HOH B 7 507 10 HOH HOH . 
F 3 HOH B 8 508 6 HOH HOH . 
F 3 HOH B 9 509 39 HOH HOH . 
F 3 HOH B 10 510 15 HOH HOH . 
F 3 HOH B 11 511 17 HOH HOH . 
F 3 HOH B 12 512 4 HOH HOH . 
F 3 HOH B 13 513 29 HOH HOH . 
F 3 HOH B 14 514 22 HOH HOH . 
F 3 HOH B 15 515 50 HOH HOH . 
F 3 HOH B 16 516 53 HOH HOH . 
F 3 HOH B 17 517 33 HOH HOH . 
F 3 HOH B 18 518 24 HOH HOH . 
F 3 HOH B 19 519 23 HOH HOH . 
F 3 HOH B 20 520 45 HOH HOH . 
F 3 HOH B 21 521 34 HOH HOH . 
F 3 HOH B 22 522 37 HOH HOH . 
F 3 HOH B 23 523 13 HOH HOH . 
F 3 HOH B 24 524 18 HOH HOH . 
F 3 HOH B 25 525 36 HOH HOH . 
F 3 HOH B 26 526 26 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 80I . . . D 2 11.314 24.388 25.745 1 37.96 ? C10 80I 401 B 1 
HETATM 2 C C13 80I . . . D 2 12.738 24.842 28.052 1 41.56 ? C13 80I 401 B 1 
HETATM 3 C C15 80I . . . D 2 11.452 16.308 27.528 1 36.42 ? C15 80I 401 B 1 
HETATM 4 C C20 80I . . . D 2 6.769 15.2 26.309 1 37.56 ? C20 80I 401 B 1 
HETATM 5 C C21 80I . . . D 2 5.813 15.016 25.302 1 40.19 ? C21 80I 401 B 1 
HETATM 6 C C24 80I . . . D 2 5.966 16.013 27.479 1 37.65 ? C24 80I 401 B 1 
HETATM 7 C C26 80I . . . D 2 8.373 13.023 29.072 1 40.51 ? C26 80I 401 B 1 
HETATM 8 C C02 80I . . . D 2 10.798 18.344 26.293 1 37.79 ? C02 80I 401 B 1 
HETATM 9 C C03 80I . . . D 2 10.844 19.847 26.065 1 39.5 ? C03 80I 401 B 1 
HETATM 10 C C05 80I . . . D 2 11.623 20.756 26.775 1 35.23 ? C05 80I 401 B 1 
HETATM 11 C C06 80I . . . D 2 11.339 22.023 26.213 1 41.27 ? C06 80I 401 B 1 
HETATM 12 C C07 80I . . . D 2 10.41 21.811 25.197 1 41.77 ? C07 80I 401 B 1 
HETATM 13 C C08 80I . . . D 2 9.914 22.891 24.441 1 40.82 ? C08 80I 401 B 1 
HETATM 14 C C09 80I . . . D 2 10.375 24.175 24.725 1 42.72 ? C09 80I 401 B 1 
HETATM 15 C C11 80I . . . D 2 11.801 23.326 26.492 1 41.6 ? C11 80I 401 B 1 
HETATM 16 C C16 80I . . . D 2 10.07 15.912 28.028 1 36.09 ? C16 80I 401 B 1 
HETATM 17 C C18 80I . . . D 2 8.249 14.19 28.071 1 40.85 ? C18 80I 401 B 1 
HETATM 18 C C19 80I . . . D 2 7.335 13.886 26.866 1 35.77 ? C19 80I 401 B 1 
HETATM 19 C C23 80I . . . D 2 5.028 16.743 26.809 1 38.99 ? C23 80I 401 B 1 
HETATM 20 C C27 80I . . . D 2 9.419 13.129 30.187 1 38.52 ? C27 80I 401 B 1 
HETATM 21 C C35 80I . . . D 2 12.519 15.861 28.514 1 37.86 ? C35 80I 401 B 1 
HETATM 22 C C36 80I . . . D 2 13.911 16.185 27.978 1 39.63 ? C36 80I 401 B 1 
HETATM 23 C C37 80I . . . D 2 14.363 15.139 26.956 1 36.58 ? C37 80I 401 B 1 
HETATM 24 C C38 80I . . . D 2 14.892 16.248 29.144 1 39.36 ? C38 80I 401 B 1 
HETATM 25 N N04 80I . . . D 2 10.147 20.494 25.145 1 36.72 ? N04 80I 401 B 1 
HETATM 26 N N14 80I . . . D 2 11.534 17.744 27.375 1 34.94 ? N14 80I 401 B 1 
HETATM 27 N N17 80I . . . D 2 9.563 14.624 27.627 1 34.95 ? N17 80I 401 B 1 
HETATM 28 N N22 80I . . . D 2 4.719 15.917 25.51 1 41.01 ? N22 80I 401 B 1 
HETATM 29 O O01 80I . . . D 2 10.142 17.664 25.591 1 38.82 ? O01 80I 401 B 1 
HETATM 30 O O12 80I . . . D 2 12.747 23.545 27.517 1 42.3 ? O12 80I 401 B 1 
HETATM 31 O O25 80I . . . D 2 5.882 14.251 24.395 1 33.94 ? O25 80I 401 B 1 
HETATM 32 O O28 80I . . . D 2 9.012 14.196 31.015 1 43.3 ? O28 80I 401 B 1 
HETATM 33 O O30 80I . . . D 2 7.24 15.429 32.512 1 54.7 -1 O30 80I 401 B 1 
HETATM 34 O O31 80I . . . D 2 8.277 13.35 33.368 1 51.11 -1 O31 80I 401 B 1 
HETATM 35 O O32 80I . . . D 2 6.619 13.28 31.54 1 53.33 ? O32 80I 401 B 1 
HETATM 36 O O33 80I . . . D 2 7.563 12.157 29.086 1 39.59 ? O33 80I 401 B 1 
HETATM 37 O O34 80I . . . D 2 9.418 16.628 28.71 1 32.52 ? O34 80I 401 B 1 
HETATM 38 P P29 80I . . . D 2 7.773 14.059 32.131 1 56.11 ? P29 80I 401 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           387 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           38 
#