data_8HWK # _model_server_result.job_id g7d6Vzz5K9Y7gbFHw_Vv9Q _model_server_result.datetime_utc '2025-02-28 12:23:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hwk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":903}' # _entry.id 8HWK # _exptl.entry_id 8HWK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.84 _cell.angle_gamma 90 _cell.entry_id 8HWK _cell.length_a 206.15 _cell.length_b 101.188 _cell.length_c 106.791 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HWK _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,K 1 1 B,D,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 J N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GLC GLC C1 O1 . O4 HO4 . sing 2 ? 2 3 2 GLC GLC C1 O1 . O4 HO4 . sing 3 ? 2 4 3 GLC GLC C1 O1 . O4 HO4 . sing 4 ? 2 5 4 GLC GLC C1 O1 . O4 HO4 . sing 5 ? 2 6 5 GLC GLC C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC C 1 GLC 2 n C GLC 2 C 2 GLC C 2 GLC 2 n C GLC 3 C 3 GLC C 3 GLC 2 n C GLC 4 C 4 GLC C 4 GLC 2 n C GLC 5 C 5 GLC C 5 GLC 2 n C GLC 6 C 6 GLC C 6 GLC 2 n D GLC 1 D 1 GLC D 1 GLC 2 n D GLC 2 D 2 GLC D 2 GLC 2 n D GLC 3 D 3 GLC D 3 GLC 2 n D GLC 4 D 4 GLC D 4 GLC 2 n D GLC 5 D 5 GLC D 5 GLC 2 n D GLC 6 D 6 GLC D 6 GLC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale2 C O4 GLC . C GLC 2 1_555 C C1 GLC . C GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? covale ? covale3 C O4 GLC . C GLC 3 1_555 C C1 GLC . C GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? covale ? covale4 C O4 GLC . C GLC 4 1_555 C C1 GLC . C GLC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.422 ? covale ? covale5 C O4 GLC . C GLC 5 1_555 C C1 GLC . C GLC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale6 D O4 GLC . D GLC 1 1_555 D C1 GLC . D GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale7 D O4 GLC . D GLC 2 1_555 D C1 GLC . D GLC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? covale ? covale8 D O4 GLC . D GLC 3 1_555 D C1 GLC . D GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale9 D O4 GLC . D GLC 4 1_555 D C1 GLC . D GLC 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? covale ? covale10 D O4 GLC . D GLC 5 1_555 D C1 GLC . D GLC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? metalc ? metalc1 A O GLU 191 A GLU 215 1_555 E NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc2 A OE2 GLU 191 A GLU 215 1_555 E NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc3 A OD1 ASP 197 A ASP 221 1_555 E NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc4 A O HIS 241 A HIS 265 1_555 E NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc5 A OD1 ASN 697 A ASN 721 1_555 E NA NA . A NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc6 B O GLU 191 B GLU 215 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc7 B OE2 GLU 191 B GLU 215 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc8 B OD1 ASP 197 B ASP 221 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc9 B O HIS 241 B HIS 265 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc10 B OD1 ASN 697 B ASN 721 1_555 H NA NA . B NA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc11 H NA NA . B NA 901 1_555 L O HOH . B HOH 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 268 n n C1 C2 PEG sing 269 n n C1 H11 PEG sing 270 n n C1 H12 PEG sing 271 n n O1 HO1 PEG sing 272 n n C2 O2 PEG sing 273 n n C2 H21 PEG sing 274 n n C2 H22 PEG sing 275 n n O2 C3 PEG sing 276 n n C3 C4 PEG sing 277 n n C3 H31 PEG sing 278 n n C3 H32 PEG sing 279 n n C4 O4 PEG sing 280 n n C4 H41 PEG sing 281 n n C4 H42 PEG sing 282 n n O4 HO4 PEG sing 283 n n # _atom_sites.entry_id 8HWK _atom_sites.fract_transf_matrix[1][1] 0.004851 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001655 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009883 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NA A 1 901 2 NA NA . F 4 CIT A 1 902 2 CIT CIT . G 5 PEG A 1 903 2 PEG PEG . H 3 NA B 1 901 1 NA NA . I 4 CIT B 1 902 1 CIT CIT . J 5 PEG B 1 903 1 PEG PEG . K 6 HOH A 1 1001 17 HOH HOH . K 6 HOH A 2 1002 31 HOH HOH . K 6 HOH A 3 1003 47 HOH HOH . K 6 HOH A 4 1004 76 HOH HOH . K 6 HOH A 5 1005 16 HOH HOH . K 6 HOH A 6 1006 23 HOH HOH . K 6 HOH A 7 1007 35 HOH HOH . K 6 HOH A 8 1008 71 HOH HOH . K 6 HOH A 9 1009 75 HOH HOH . K 6 HOH A 10 1010 34 HOH HOH . K 6 HOH A 11 1011 27 HOH HOH . K 6 HOH A 12 1012 4 HOH HOH . K 6 HOH A 13 1013 85 HOH HOH . K 6 HOH A 14 1014 84 HOH HOH . K 6 HOH A 15 1015 89 HOH HOH . K 6 HOH A 16 1016 26 HOH HOH . K 6 HOH A 17 1017 9 HOH HOH . K 6 HOH A 18 1018 19 HOH HOH . K 6 HOH A 19 1019 87 HOH HOH . K 6 HOH A 20 1020 50 HOH HOH . K 6 HOH A 21 1021 62 HOH HOH . K 6 HOH A 22 1022 88 HOH HOH . K 6 HOH A 23 1023 28 HOH HOH . K 6 HOH A 24 1024 64 HOH HOH . K 6 HOH A 25 1025 5 HOH HOH . K 6 HOH A 26 1026 25 HOH HOH . K 6 HOH A 27 1027 49 HOH HOH . K 6 HOH A 28 1028 15 HOH HOH . K 6 HOH A 29 1029 74 HOH HOH . K 6 HOH A 30 1030 61 HOH HOH . K 6 HOH A 31 1031 54 HOH HOH . K 6 HOH A 32 1032 41 HOH HOH . K 6 HOH A 33 1033 22 HOH HOH . K 6 HOH A 34 1034 8 HOH HOH . K 6 HOH A 35 1035 51 HOH HOH . K 6 HOH A 36 1036 55 HOH HOH . K 6 HOH A 37 1037 52 HOH HOH . K 6 HOH A 38 1038 57 HOH HOH . K 6 HOH A 39 1039 63 HOH HOH . K 6 HOH A 40 1040 56 HOH HOH . K 6 HOH A 41 1041 7 HOH HOH . K 6 HOH A 42 1042 6 HOH HOH . K 6 HOH A 43 1043 68 HOH HOH . K 6 HOH A 44 1044 72 HOH HOH . K 6 HOH A 45 1045 32 HOH HOH . L 6 HOH B 1 1001 92 HOH HOH . L 6 HOH B 2 1002 73 HOH HOH . L 6 HOH B 3 1003 42 HOH HOH . L 6 HOH B 4 1004 29 HOH HOH . L 6 HOH B 5 1005 78 HOH HOH . L 6 HOH B 6 1006 79 HOH HOH . L 6 HOH B 7 1007 95 HOH HOH . L 6 HOH B 8 1008 96 HOH HOH . L 6 HOH B 9 1009 20 HOH HOH . L 6 HOH B 10 1010 59 HOH HOH . L 6 HOH B 11 1011 11 HOH HOH . L 6 HOH B 12 1012 53 HOH HOH . L 6 HOH B 13 1013 13 HOH HOH . L 6 HOH B 14 1014 45 HOH HOH . L 6 HOH B 15 1015 10 HOH HOH . L 6 HOH B 16 1016 67 HOH HOH . L 6 HOH B 17 1017 38 HOH HOH . L 6 HOH B 18 1018 86 HOH HOH . L 6 HOH B 19 1019 97 HOH HOH . L 6 HOH B 20 1020 90 HOH HOH . L 6 HOH B 21 1021 12 HOH HOH . L 6 HOH B 22 1022 37 HOH HOH . L 6 HOH B 23 1023 66 HOH HOH . L 6 HOH B 24 1024 77 HOH HOH . L 6 HOH B 25 1025 93 HOH HOH . L 6 HOH B 26 1026 70 HOH HOH . L 6 HOH B 27 1027 2 HOH HOH . L 6 HOH B 28 1028 58 HOH HOH . L 6 HOH B 29 1029 80 HOH HOH . L 6 HOH B 30 1030 46 HOH HOH . L 6 HOH B 31 1031 65 HOH HOH . L 6 HOH B 32 1032 24 HOH HOH . L 6 HOH B 33 1033 81 HOH HOH . L 6 HOH B 34 1034 60 HOH HOH . L 6 HOH B 35 1035 18 HOH HOH . L 6 HOH B 36 1036 83 HOH HOH . L 6 HOH B 37 1037 1 HOH HOH . L 6 HOH B 38 1038 21 HOH HOH . L 6 HOH B 39 1039 39 HOH HOH . L 6 HOH B 40 1040 33 HOH HOH . L 6 HOH B 41 1041 91 HOH HOH . L 6 HOH B 42 1042 14 HOH HOH . L 6 HOH B 43 1043 82 HOH HOH . L 6 HOH B 44 1044 43 HOH HOH . L 6 HOH B 45 1045 36 HOH HOH . L 6 HOH B 46 1046 40 HOH HOH . L 6 HOH B 47 1047 48 HOH HOH . L 6 HOH B 48 1048 94 HOH HOH . L 6 HOH B 49 1049 69 HOH HOH . L 6 HOH B 50 1050 44 HOH HOH . L 6 HOH B 51 1051 3 HOH HOH . L 6 HOH B 52 1052 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . G 5 36.725 -11.964 52.268 1 32.89 ? C1 PEG 903 A 1 HETATM 2 O O1 PEG . . . G 5 35.548 -11.991 53.101 1 33.54 ? O1 PEG 903 A 1 HETATM 3 C C2 PEG . . . G 5 36.377 -11.609 50.838 1 33.64 ? C2 PEG 903 A 1 HETATM 4 O O2 PEG . . . G 5 37.149 -12.487 50.009 1 35.19 ? O2 PEG 903 A 1 HETATM 5 C C3 PEG . . . G 5 38.1 -11.777 49.212 1 32.38 ? C3 PEG 903 A 1 HETATM 6 C C4 PEG . . . G 5 39.304 -11.386 50.069 1 29.92 ? C4 PEG 903 A 1 HETATM 7 O O4 PEG . . . G 5 40.066 -12.567 50.215 1 28.12 ? O4 PEG 903 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #