data_8HX6 # _model_server_result.job_id 48kPbHmWvt2HQnWJUfX5Rw _model_server_result.datetime_utc '2024-11-17 13:17:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hx6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":701}' # _entry.id 8HX6 # _exptl.entry_id 8HX6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HX6 _cell.length_a 98.67 _cell.length_b 171.405 _cell.length_c 160.838 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HX6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 96 A VAL 80 1_555 A N OCS 97 A OCS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C OCS 97 A OCS 81 1_555 A N LEU 98 A LEU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale3 B C VAL 96 B VAL 80 1_555 B N OCS 97 B OCS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale4 B C OCS 97 B OCS 81 1_555 B N LEU 98 B LEU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? metalc ? metalc1 A O SER 190 A SER 174 1_555 E MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? metalc ? metalc2 A OD1 ASP 191 A ASP 175 1_555 E MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 349 n n N H TRP sing 350 n n N H2 TRP sing 351 n n CA C TRP sing 352 n n CA CB TRP sing 353 n n CA HA TRP sing 354 n n C O TRP doub 355 n n C OXT TRP sing 356 n n CB CG TRP sing 357 n n CB HB2 TRP sing 358 n n CB HB3 TRP sing 359 n n CG CD1 TRP doub 360 n y CG CD2 TRP sing 361 n y CD1 NE1 TRP sing 362 n y CD1 HD1 TRP sing 363 n n CD2 CE2 TRP doub 364 n y CD2 CE3 TRP sing 365 n y NE1 CE2 TRP sing 366 n y NE1 HE1 TRP sing 367 n n CE2 CZ2 TRP sing 368 n y CE3 CZ3 TRP doub 369 n y CE3 HE3 TRP sing 370 n n CZ2 CH2 TRP doub 371 n y CZ2 HZ2 TRP sing 372 n n CZ3 CH2 TRP sing 373 n y CZ3 HZ3 TRP sing 374 n n CH2 HH2 TRP sing 375 n n OXT HXT TRP sing 376 n n # _atom_sites.entry_id 8HX6 _atom_sites.fract_transf_matrix[1][1] 0.010135 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005834 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006217 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRP A 1 701 701 TRP TRP . D 3 MLT A 1 702 801 MLT MLT . E 4 MG A 1 703 1 MG MG . F 2 TRP B 1 701 701 TRP TRP . G 5 SIN B 1 702 801 SIN SIN . H 6 HOH A 1 801 6 HOH HOH . H 6 HOH A 2 802 27 HOH HOH . H 6 HOH A 3 803 30 HOH HOH . H 6 HOH A 4 804 13 HOH HOH . H 6 HOH A 5 805 1 HOH HOH . H 6 HOH A 6 806 24 HOH HOH . H 6 HOH A 7 807 14 HOH HOH . H 6 HOH A 8 808 42 HOH HOH . H 6 HOH A 9 809 38 HOH HOH . H 6 HOH A 10 810 21 HOH HOH . H 6 HOH A 11 811 3 HOH HOH . H 6 HOH A 12 812 4 HOH HOH . H 6 HOH A 13 813 34 HOH HOH . H 6 HOH A 14 814 23 HOH HOH . H 6 HOH A 15 815 8 HOH HOH . H 6 HOH A 16 816 45 HOH HOH . H 6 HOH A 17 817 48 HOH HOH . H 6 HOH A 18 818 2 HOH HOH . H 6 HOH A 19 819 7 HOH HOH . H 6 HOH A 20 820 10 HOH HOH . H 6 HOH A 21 821 26 HOH HOH . H 6 HOH A 22 822 17 HOH HOH . H 6 HOH A 23 823 35 HOH HOH . H 6 HOH A 24 824 25 HOH HOH . H 6 HOH A 25 825 32 HOH HOH . H 6 HOH A 26 826 31 HOH HOH . H 6 HOH A 27 827 36 HOH HOH . H 6 HOH A 28 828 50 HOH HOH . H 6 HOH A 29 829 28 HOH HOH . H 6 HOH A 30 830 29 HOH HOH . H 6 HOH A 31 831 41 HOH HOH . H 6 HOH A 32 832 18 HOH HOH . H 6 HOH A 33 833 40 HOH HOH . I 6 HOH B 1 801 37 HOH HOH . I 6 HOH B 2 802 33 HOH HOH . I 6 HOH B 3 803 39 HOH HOH . I 6 HOH B 4 804 44 HOH HOH . I 6 HOH B 5 805 11 HOH HOH . I 6 HOH B 6 806 9 HOH HOH . I 6 HOH B 7 807 16 HOH HOH . I 6 HOH B 8 808 19 HOH HOH . I 6 HOH B 9 809 12 HOH HOH . I 6 HOH B 10 810 15 HOH HOH . I 6 HOH B 11 811 43 HOH HOH . I 6 HOH B 12 812 20 HOH HOH . I 6 HOH B 13 813 5 HOH HOH . I 6 HOH B 14 814 46 HOH HOH . I 6 HOH B 15 815 47 HOH HOH . I 6 HOH B 16 816 22 HOH HOH . I 6 HOH B 17 817 49 HOH HOH . I 6 HOH B 18 818 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . F 2 1.728 30.755 -76.063 1 53.2 ? N TRP 701 B 1 HETATM 2 C CA TRP . . . F 2 0.627 29.984 -76.718 1 53.33 ? CA TRP 701 B 1 HETATM 3 C C TRP . . . F 2 0.985 28.496 -76.713 1 54 ? C TRP 701 B 1 HETATM 4 O O TRP . . . F 2 0.129 27.64 -76.912 1 55.1 ? O TRP 701 B 1 HETATM 5 C CB TRP . . . F 2 0.374 30.49 -78.144 1 53.82 ? CB TRP 701 B 1 HETATM 6 C CG TRP . . . F 2 0.317 31.981 -78.251 1 53.5 ? CG TRP 701 B 1 HETATM 7 C CD1 TRP . . . F 2 1.372 32.83 -78.413 1 53.63 ? CD1 TRP 701 B 1 HETATM 8 C CD2 TRP . . . F 2 -0.858 32.808 -78.17 1 53 ? CD2 TRP 701 B 1 HETATM 9 N NE1 TRP . . . F 2 0.934 34.125 -78.449 1 53.4 ? NE1 TRP 701 B 1 HETATM 10 C CE2 TRP . . . F 2 -0.427 34.145 -78.304 1 52.94 ? CE2 TRP 701 B 1 HETATM 11 C CE3 TRP . . . F 2 -2.225 32.551 -78.007 1 52.71 ? CE3 TRP 701 B 1 HETATM 12 C CZ2 TRP . . . F 2 -1.317 35.218 -78.284 1 52.94 ? CZ2 TRP 701 B 1 HETATM 13 C CZ3 TRP . . . F 2 -3.104 33.613 -77.984 1 52.79 ? CZ3 TRP 701 B 1 HETATM 14 C CH2 TRP . . . F 2 -2.652 34.927 -78.12 1 52.86 ? CH2 TRP 701 B 1 HETATM 15 O OXT TRP . . . F 2 2.147 28.149 -76.513 1 54.63 ? OXT TRP 701 B 1 # _model_server_stats.io_time_ms 128 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 52 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #