data_8HX7
#
_model_server_result.job_id            MoaZRUWz4YfVsh7LGl73GQ 
_model_server_result.datetime_utc      '2024-11-17 15:24:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8hx7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":702}' 
#
_entry.id    8HX7 
#
_exptl.entry_id    8HX7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.088 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SUCCINIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8HX7 
_cell.length_a            98.291 
_cell.length_b            170.915 
_cell.length_c            160.344 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8HX7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C VAL 96 A VAL 80 1_555 A N OCS 97 A OCS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale2 A C OCS 97 A OCS 81 1_555 A N LEU 98 A LEU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale3 B C VAL 96 B VAL 80 1_555 B N OCS 97 B OCS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale4 B C OCS 97 B OCS 81 1_555 B N LEU 98 B LEU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
metalc ? metalc1 A O SER 190 A SER 174 1_555 E MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
metalc ? metalc2 A OD1 ASP 191 A ASP 175 1_555 E MG MG . A MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc3 A OE2 GLU 544 A GLU 528 1_555 F MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc4 A O ALA 668 A ALA 652 1_555 F MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc5 A OE1 GLU 678 A GLU 662 1_555 F MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? 
metalc ? metalc6 A OE2 GLU 678 A GLU 662 1_555 F MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? 
metalc ? metalc7 B O SER 190 B SER 174 1_555 I MG MG . B MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? 
metalc ? metalc8 B OD1 ASP 191 B ASP 175 1_555 I MG MG . B MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
#
_chem_comp.formula           'C4 H6 O4' 
_chem_comp.formula_weight    118.088 
_chem_comp.id                SIN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SUCCINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 SIN doub 306 n n 
C1 O2 SIN sing 307 n n 
C1 C2 SIN sing 308 n n 
O2 HO2 SIN sing 309 n n 
C2 C3 SIN sing 310 n n 
C2 H21 SIN sing 311 n n 
C2 H22 SIN sing 312 n n 
C3 C4 SIN sing 313 n n 
C3 H31 SIN sing 314 n n 
C3 H32 SIN sing 315 n n 
C4 O3 SIN doub 316 n n 
C4 O4 SIN sing 317 n n 
O4 HO4 SIN sing 318 n n 
#
_atom_sites.entry_id                     8HX7 
_atom_sites.fract_transf_matrix[1][1]    0.010174 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005851 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006237 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TRP A 1 701 701 TRP TRP . 
D 3 SIN A 1 702 801 SIN SIN . 
E 4 MG A 1 703 2 MG MG . 
F 4 MG A 1 704 3 MG MG . 
G 2 TRP B 1 701 701 TRP TRP . 
H 3 SIN B 1 702 801 SIN SIN . 
I 4 MG B 1 703 1 MG MG . 
J 5 CL B 1 704 1 CL CL . 
K 6 HOH A 1 801 22 HOH HOH . 
K 6 HOH A 2 802 142 HOH HOH . 
K 6 HOH A 3 803 101 HOH HOH . 
K 6 HOH A 4 804 149 HOH HOH . 
K 6 HOH A 5 805 1 HOH HOH . 
K 6 HOH A 6 806 91 HOH HOH . 
K 6 HOH A 7 807 81 HOH HOH . 
K 6 HOH A 8 808 139 HOH HOH . 
K 6 HOH A 9 809 133 HOH HOH . 
K 6 HOH A 10 810 72 HOH HOH . 
K 6 HOH A 11 811 83 HOH HOH . 
K 6 HOH A 12 812 37 HOH HOH . 
K 6 HOH A 13 813 79 HOH HOH . 
K 6 HOH A 14 814 147 HOH HOH . 
K 6 HOH A 15 815 61 HOH HOH . 
K 6 HOH A 16 816 28 HOH HOH . 
K 6 HOH A 17 817 2 HOH HOH . 
K 6 HOH A 18 818 97 HOH HOH . 
K 6 HOH A 19 819 140 HOH HOH . 
K 6 HOH A 20 820 6 HOH HOH . 
K 6 HOH A 21 821 18 HOH HOH . 
K 6 HOH A 22 822 113 HOH HOH . 
K 6 HOH A 23 823 126 HOH HOH . 
K 6 HOH A 24 824 5 HOH HOH . 
K 6 HOH A 25 825 39 HOH HOH . 
K 6 HOH A 26 826 128 HOH HOH . 
K 6 HOH A 27 827 146 HOH HOH . 
K 6 HOH A 28 828 90 HOH HOH . 
K 6 HOH A 29 829 75 HOH HOH . 
K 6 HOH A 30 830 96 HOH HOH . 
K 6 HOH A 31 831 69 HOH HOH . 
K 6 HOH A 32 832 98 HOH HOH . 
K 6 HOH A 33 833 123 HOH HOH . 
K 6 HOH A 34 834 9 HOH HOH . 
K 6 HOH A 35 835 62 HOH HOH . 
K 6 HOH A 36 836 8 HOH HOH . 
K 6 HOH A 37 837 35 HOH HOH . 
K 6 HOH A 38 838 84 HOH HOH . 
K 6 HOH A 39 839 49 HOH HOH . 
K 6 HOH A 40 840 16 HOH HOH . 
K 6 HOH A 41 841 19 HOH HOH . 
K 6 HOH A 42 842 17 HOH HOH . 
K 6 HOH A 43 843 50 HOH HOH . 
K 6 HOH A 44 844 4 HOH HOH . 
K 6 HOH A 45 845 70 HOH HOH . 
K 6 HOH A 46 846 66 HOH HOH . 
K 6 HOH A 47 847 43 HOH HOH . 
K 6 HOH A 48 848 36 HOH HOH . 
K 6 HOH A 49 849 92 HOH HOH . 
K 6 HOH A 50 850 120 HOH HOH . 
K 6 HOH A 51 851 60 HOH HOH . 
K 6 HOH A 52 852 15 HOH HOH . 
K 6 HOH A 53 853 30 HOH HOH . 
K 6 HOH A 54 854 112 HOH HOH . 
K 6 HOH A 55 855 116 HOH HOH . 
K 6 HOH A 56 856 14 HOH HOH . 
K 6 HOH A 57 857 52 HOH HOH . 
K 6 HOH A 58 858 32 HOH HOH . 
K 6 HOH A 59 859 73 HOH HOH . 
K 6 HOH A 60 860 25 HOH HOH . 
K 6 HOH A 61 861 65 HOH HOH . 
K 6 HOH A 62 862 102 HOH HOH . 
K 6 HOH A 63 863 47 HOH HOH . 
K 6 HOH A 64 864 11 HOH HOH . 
K 6 HOH A 65 865 95 HOH HOH . 
K 6 HOH A 66 866 103 HOH HOH . 
K 6 HOH A 67 867 148 HOH HOH . 
K 6 HOH A 68 868 104 HOH HOH . 
K 6 HOH A 69 869 109 HOH HOH . 
K 6 HOH A 70 870 74 HOH HOH . 
K 6 HOH A 71 871 23 HOH HOH . 
K 6 HOH A 72 872 127 HOH HOH . 
K 6 HOH A 73 873 20 HOH HOH . 
K 6 HOH A 74 874 106 HOH HOH . 
K 6 HOH A 75 875 76 HOH HOH . 
K 6 HOH A 76 876 24 HOH HOH . 
K 6 HOH A 77 877 129 HOH HOH . 
K 6 HOH A 78 878 86 HOH HOH . 
K 6 HOH A 79 879 99 HOH HOH . 
K 6 HOH A 80 880 13 HOH HOH . 
K 6 HOH A 81 881 48 HOH HOH . 
K 6 HOH A 82 882 55 HOH HOH . 
K 6 HOH A 83 883 71 HOH HOH . 
K 6 HOH A 84 884 78 HOH HOH . 
K 6 HOH A 85 885 33 HOH HOH . 
K 6 HOH A 86 886 100 HOH HOH . 
K 6 HOH A 87 887 138 HOH HOH . 
K 6 HOH A 88 888 87 HOH HOH . 
L 6 HOH B 1 801 143 HOH HOH . 
L 6 HOH B 2 802 29 HOH HOH . 
L 6 HOH B 3 803 93 HOH HOH . 
L 6 HOH B 4 804 145 HOH HOH . 
L 6 HOH B 5 805 27 HOH HOH . 
L 6 HOH B 6 806 7 HOH HOH . 
L 6 HOH B 7 807 115 HOH HOH . 
L 6 HOH B 8 808 119 HOH HOH . 
L 6 HOH B 9 809 110 HOH HOH . 
L 6 HOH B 10 810 44 HOH HOH . 
L 6 HOH B 11 811 121 HOH HOH . 
L 6 HOH B 12 812 94 HOH HOH . 
L 6 HOH B 13 813 68 HOH HOH . 
L 6 HOH B 14 814 111 HOH HOH . 
L 6 HOH B 15 815 135 HOH HOH . 
L 6 HOH B 16 816 26 HOH HOH . 
L 6 HOH B 17 817 40 HOH HOH . 
L 6 HOH B 18 818 57 HOH HOH . 
L 6 HOH B 19 819 21 HOH HOH . 
L 6 HOH B 20 820 53 HOH HOH . 
L 6 HOH B 21 821 12 HOH HOH . 
L 6 HOH B 22 822 117 HOH HOH . 
L 6 HOH B 23 823 85 HOH HOH . 
L 6 HOH B 24 824 89 HOH HOH . 
L 6 HOH B 25 825 141 HOH HOH . 
L 6 HOH B 26 826 10 HOH HOH . 
L 6 HOH B 27 827 59 HOH HOH . 
L 6 HOH B 28 828 42 HOH HOH . 
L 6 HOH B 29 829 41 HOH HOH . 
L 6 HOH B 30 830 56 HOH HOH . 
L 6 HOH B 31 831 34 HOH HOH . 
L 6 HOH B 32 832 88 HOH HOH . 
L 6 HOH B 33 833 132 HOH HOH . 
L 6 HOH B 34 834 31 HOH HOH . 
L 6 HOH B 35 835 108 HOH HOH . 
L 6 HOH B 36 836 144 HOH HOH . 
L 6 HOH B 37 837 114 HOH HOH . 
L 6 HOH B 38 838 58 HOH HOH . 
L 6 HOH B 39 839 107 HOH HOH . 
L 6 HOH B 40 840 125 HOH HOH . 
L 6 HOH B 41 841 77 HOH HOH . 
L 6 HOH B 42 842 134 HOH HOH . 
L 6 HOH B 43 843 54 HOH HOH . 
L 6 HOH B 44 844 3 HOH HOH . 
L 6 HOH B 45 845 131 HOH HOH . 
L 6 HOH B 46 846 137 HOH HOH . 
L 6 HOH B 47 847 130 HOH HOH . 
L 6 HOH B 48 848 118 HOH HOH . 
L 6 HOH B 49 849 51 HOH HOH . 
L 6 HOH B 50 850 64 HOH HOH . 
L 6 HOH B 51 851 45 HOH HOH . 
L 6 HOH B 52 852 122 HOH HOH . 
L 6 HOH B 53 853 67 HOH HOH . 
L 6 HOH B 54 854 46 HOH HOH . 
L 6 HOH B 55 855 63 HOH HOH . 
L 6 HOH B 56 856 82 HOH HOH . 
L 6 HOH B 57 857 105 HOH HOH . 
L 6 HOH B 58 858 136 HOH HOH . 
L 6 HOH B 59 859 80 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SIN . . . D 3 -28.105 5.799 51.264 1 57.66 ? C1 SIN 702 A 1 
HETATM 2 O O1 SIN . . . D 3 -27.479 4.983 50.564 1 59.68 ? O1 SIN 702 A 1 
HETATM 3 O O2 SIN . . . D 3 -29.108 6.425 50.871 1 54.24 ? O2 SIN 702 A 1 
HETATM 4 C C2 SIN . . . D 3 -27.596 6.066 52.667 1 59.75 ? C2 SIN 702 A 1 
HETATM 5 C C3 SIN . . . D 3 -26.571 7.182 52.741 1 57.13 ? C3 SIN 702 A 1 
HETATM 6 C C4 SIN . . . D 3 -26.085 7.483 54.144 1 54.3 ? C4 SIN 702 A 1 
HETATM 7 O O3 SIN . . . D 3 -25.303 8.444 54.303 1 51.34 ? O3 SIN 702 A 1 
HETATM 8 O O4 SIN . . . D 3 -26.489 6.752 55.071 1 53.81 ? O4 SIN 702 A 1 
#
_model_server_stats.io_time_ms              125 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           361 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           8 
#