data_8HX9 # _model_server_result.job_id 1_fND2J9FHmnIRuQqhX12g _model_server_result.datetime_utc '2024-11-17 11:29:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hx9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":701}' # _entry.id 8HX9 # _exptl.entry_id 8HX9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HX9 _cell.length_a 99.289 _cell.length_b 170.784 _cell.length_c 162.079 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HX9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 96 A VAL 80 1_555 A N OCS 97 A OCS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C OCS 97 A OCS 81 1_555 A N LEU 98 A LEU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale3 B C VAL 96 B VAL 80 1_555 B N OCS 97 B OCS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale4 B C OCS 97 B OCS 81 1_555 B N LEU 98 B LEU 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? metalc ? metalc1 A O SER 190 A SER 174 1_555 F MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc2 A OD1 ASP 191 A ASP 175 1_555 F MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc3 A OE2 GLU 681 A GLU 665 1_555 G MG MG . A MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc4 D O8 ISJ . A ISJ 702 1_555 G MG MG . A MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc5 D O9 ISJ . A ISJ 702 1_555 G MG MG . A MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc6 B O SER 190 B SER 174 1_555 J MG MG . B MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc7 B OD1 ASP 191 B ASP 175 1_555 J MG MG . B MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 365 n n N H TRP sing 366 n n N H2 TRP sing 367 n n CA C TRP sing 368 n n CA CB TRP sing 369 n n CA HA TRP sing 370 n n C O TRP doub 371 n n C OXT TRP sing 372 n n CB CG TRP sing 373 n n CB HB2 TRP sing 374 n n CB HB3 TRP sing 375 n n CG CD1 TRP doub 376 n y CG CD2 TRP sing 377 n y CD1 NE1 TRP sing 378 n y CD1 HD1 TRP sing 379 n n CD2 CE2 TRP doub 380 n y CD2 CE3 TRP sing 381 n y NE1 CE2 TRP sing 382 n y NE1 HE1 TRP sing 383 n n CE2 CZ2 TRP sing 384 n y CE3 CZ3 TRP doub 385 n y CE3 HE3 TRP sing 386 n n CZ2 CH2 TRP doub 387 n y CZ2 HZ2 TRP sing 388 n n CZ3 CH2 TRP sing 389 n y CZ3 HZ3 TRP sing 390 n n CH2 HH2 TRP sing 391 n n OXT HXT TRP sing 392 n n # _atom_sites.entry_id 8HX9 _atom_sites.fract_transf_matrix[1][1] 0.010072 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005855 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00617 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRP A 1 701 701 TRP TRP . D 3 ISJ A 1 702 801 ISJ ISJ . E 4 GOL A 1 703 801 GOL GOL . F 5 MG A 1 704 2 MG MG . G 5 MG A 1 705 3 MG MG . H 2 TRP B 1 701 701 TRP TRP . I 6 FMT B 1 702 802 FMT FMT . J 5 MG B 1 703 1 MG MG . K 7 HOH A 1 801 69 HOH HOH . K 7 HOH A 2 802 30 HOH HOH . K 7 HOH A 3 803 10 HOH HOH . K 7 HOH A 4 804 6 HOH HOH . K 7 HOH A 5 805 70 HOH HOH . K 7 HOH A 6 806 24 HOH HOH . K 7 HOH A 7 807 66 HOH HOH . K 7 HOH A 8 808 19 HOH HOH . K 7 HOH A 9 809 26 HOH HOH . K 7 HOH A 10 810 35 HOH HOH . K 7 HOH A 11 811 34 HOH HOH . K 7 HOH A 12 812 57 HOH HOH . K 7 HOH A 13 813 44 HOH HOH . K 7 HOH A 14 814 18 HOH HOH . K 7 HOH A 15 815 51 HOH HOH . K 7 HOH A 16 816 11 HOH HOH . K 7 HOH A 17 817 40 HOH HOH . K 7 HOH A 18 818 4 HOH HOH . K 7 HOH A 19 819 5 HOH HOH . K 7 HOH A 20 820 17 HOH HOH . K 7 HOH A 21 821 2 HOH HOH . K 7 HOH A 22 822 56 HOH HOH . K 7 HOH A 23 823 52 HOH HOH . K 7 HOH A 24 824 60 HOH HOH . K 7 HOH A 25 825 7 HOH HOH . K 7 HOH A 26 826 50 HOH HOH . K 7 HOH A 27 827 46 HOH HOH . K 7 HOH A 28 828 1 HOH HOH . K 7 HOH A 29 829 33 HOH HOH . K 7 HOH A 30 830 54 HOH HOH . K 7 HOH A 31 831 14 HOH HOH . K 7 HOH A 32 832 41 HOH HOH . K 7 HOH A 33 833 62 HOH HOH . K 7 HOH A 34 834 48 HOH HOH . K 7 HOH A 35 835 67 HOH HOH . K 7 HOH A 36 836 16 HOH HOH . K 7 HOH A 37 837 53 HOH HOH . K 7 HOH A 38 838 31 HOH HOH . K 7 HOH A 39 839 12 HOH HOH . K 7 HOH A 40 840 68 HOH HOH . K 7 HOH A 41 841 13 HOH HOH . K 7 HOH A 42 842 58 HOH HOH . K 7 HOH A 43 843 27 HOH HOH . K 7 HOH A 44 844 59 HOH HOH . K 7 HOH A 45 845 22 HOH HOH . K 7 HOH A 46 846 61 HOH HOH . L 7 HOH B 1 801 8 HOH HOH . L 7 HOH B 2 802 9 HOH HOH . L 7 HOH B 3 803 63 HOH HOH . L 7 HOH B 4 804 32 HOH HOH . L 7 HOH B 5 805 36 HOH HOH . L 7 HOH B 6 806 15 HOH HOH . L 7 HOH B 7 807 25 HOH HOH . L 7 HOH B 8 808 3 HOH HOH . L 7 HOH B 9 809 20 HOH HOH . L 7 HOH B 10 810 49 HOH HOH . L 7 HOH B 11 811 64 HOH HOH . L 7 HOH B 12 812 42 HOH HOH . L 7 HOH B 13 813 29 HOH HOH . L 7 HOH B 14 814 55 HOH HOH . L 7 HOH B 15 815 28 HOH HOH . L 7 HOH B 16 816 43 HOH HOH . L 7 HOH B 17 817 47 HOH HOH . L 7 HOH B 18 818 21 HOH HOH . L 7 HOH B 19 819 38 HOH HOH . L 7 HOH B 20 820 23 HOH HOH . L 7 HOH B 21 821 37 HOH HOH . L 7 HOH B 22 822 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . H 2 -51.346 -30.258 4.693 1 37.88 ? N TRP 701 B 1 HETATM 2 C CA TRP . . . H 2 -50.38 -29.461 3.888 1 38.63 ? CA TRP 701 B 1 HETATM 3 C C TRP . . . H 2 -50.804 -27.987 3.911 1 38.93 ? C TRP 701 B 1 HETATM 4 O O TRP . . . H 2 -49.973 -27.147 3.526 1 39.42 ? O TRP 701 B 1 HETATM 5 C CB TRP . . . H 2 -50.293 -30 2.455 1 40.95 ? CB TRP 701 B 1 HETATM 6 C CG TRP . . . H 2 -50.19 -31.493 2.379 1 41.4 ? CG TRP 701 B 1 HETATM 7 C CD1 TRP . . . H 2 -51.218 -32.371 2.202 1 41.94 ? CD1 TRP 701 B 1 HETATM 8 C CD2 TRP . . . H 2 -48.993 -32.287 2.468 1 43.63 ? CD2 TRP 701 B 1 HETATM 9 N NE1 TRP . . . H 2 -50.746 -33.654 2.188 1 43.03 ? NE1 TRP 701 B 1 HETATM 10 C CE2 TRP . . . H 2 -49.387 -33.637 2.344 1 45.08 ? CE2 TRP 701 B 1 HETATM 11 C CE3 TRP . . . H 2 -47.635 -31.995 2.638 1 44.77 ? CE3 TRP 701 B 1 HETATM 12 C CZ2 TRP . . . H 2 -48.47 -34.688 2.383 1 47.92 ? CZ2 TRP 701 B 1 HETATM 13 C CZ3 TRP . . . H 2 -46.73 -33.035 2.683 1 47.09 ? CZ3 TRP 701 B 1 HETATM 14 C CH2 TRP . . . H 2 -47.144 -34.362 2.555 1 47.7 ? CH2 TRP 701 B 1 HETATM 15 O OXT TRP . . . H 2 -51.954 -27.737 4.314 1 38.81 ? OXT TRP 701 B 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 103 _model_server_stats.query_time_ms 498 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #