data_8HY3 # _model_server_result.job_id f8LGeDzGHA1096V3GiWW_g _model_server_result.datetime_utc '2025-01-16 00:15:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hy3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8HY3 # _exptl.entry_id 8HY3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HY3 _cell.length_a 273.952 _cell.length_b 273.952 _cell.length_c 273.952 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HY3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 41 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 127 A ASP 159 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc2 A OE1 GLU 170 A GLU 202 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc3 A OE2 GLU 170 A GLU 202 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc4 A NE2 HIS 298 A HIS 330 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc5 B ZN ZN . A ZN 401 1_555 C N04 4Q8 . A 4Q8 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8HY3 _atom_sites.fract_transf_matrix[1][1] 0.00365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00365 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 401 ZN ZN . C 3 4Q8 A 1 402 501 4Q8 043 . D 4 CO2 A 1 403 601 CO2 CO2 . E 5 GOL A 1 404 101 GOL GOL . F 6 HOH A 1 501 38 HOH HOH . F 6 HOH A 2 502 26 HOH HOH . F 6 HOH A 3 503 21 HOH HOH . F 6 HOH A 4 504 27 HOH HOH . F 6 HOH A 5 505 29 HOH HOH . F 6 HOH A 6 506 42 HOH HOH . F 6 HOH A 7 507 9 HOH HOH . F 6 HOH A 8 508 33 HOH HOH . F 6 HOH A 9 509 41 HOH HOH . F 6 HOH A 10 510 18 HOH HOH . F 6 HOH A 11 511 34 HOH HOH . F 6 HOH A 12 512 23 HOH HOH . F 6 HOH A 13 513 22 HOH HOH . F 6 HOH A 14 514 1 HOH HOH . F 6 HOH A 15 515 2 HOH HOH . F 6 HOH A 16 516 30 HOH HOH . F 6 HOH A 17 517 5 HOH HOH . F 6 HOH A 18 518 28 HOH HOH . F 6 HOH A 19 519 3 HOH HOH . F 6 HOH A 20 520 32 HOH HOH . F 6 HOH A 21 521 39 HOH HOH . F 6 HOH A 22 522 19 HOH HOH . F 6 HOH A 23 523 14 HOH HOH . F 6 HOH A 24 524 20 HOH HOH . F 6 HOH A 25 525 13 HOH HOH . F 6 HOH A 26 526 6 HOH HOH . F 6 HOH A 27 527 7 HOH HOH . F 6 HOH A 28 528 37 HOH HOH . F 6 HOH A 29 529 10 HOH HOH . F 6 HOH A 30 530 11 HOH HOH . F 6 HOH A 31 531 31 HOH HOH . F 6 HOH A 32 532 12 HOH HOH . F 6 HOH A 33 533 36 HOH HOH . F 6 HOH A 34 534 4 HOH HOH . F 6 HOH A 35 535 35 HOH HOH . F 6 HOH A 36 536 17 HOH HOH . F 6 HOH A 37 537 15 HOH HOH . F 6 HOH A 38 538 44 HOH HOH . F 6 HOH A 39 539 16 HOH HOH . F 6 HOH A 40 540 24 HOH HOH . F 6 HOH A 41 541 8 HOH HOH . F 6 HOH A 42 542 25 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -34.108 _atom_site.Cartn_y -26.347 _atom_site.Cartn_z 6.957 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 56.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #