data_8HYD # _model_server_result.job_id 3ZmnFA6UY0iDRURffP0sHw _model_server_result.datetime_utc '2024-12-11 14:48:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hyd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 8HYD # _exptl.entry_id 8HYD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8HYD _cell.length_a 46.009 _cell.length_b 64.533 _cell.length_c 90.678 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HYD _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 83 A HIS 114 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc2 A ND1 HIS 85 A HIS 116 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? metalc ? metalc3 A OD2 ASP 87 A ASP 118 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc4 A NE2 HIS 148 A HIS 179 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc5 A SG CYS 167 A CYS 198 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc6 A NE2 HIS 209 A HIS 240 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc7 B ZN ZN . A ZN 301 1_555 E O HOH . A HOH 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc8 C ZN ZN . A ZN 302 1_555 D N03 60J . A 60J 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc9 C ZN ZN . A ZN 302 1_555 D O06 60J . A 60J 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc10 C ZN ZN . A ZN 302 1_555 E O HOH . A HOH 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8HYD _atom_sites.fract_transf_matrix[1][1] 0.021735 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015496 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011028 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 2 ZN A 1 302 302 ZN ZN . D 3 60J A 1 303 401 60J 109 . E 4 HOH A 1 401 97 HOH HOH . E 4 HOH A 2 402 100 HOH HOH . E 4 HOH A 3 403 76 HOH HOH . E 4 HOH A 4 404 74 HOH HOH . E 4 HOH A 5 405 52 HOH HOH . E 4 HOH A 6 406 23 HOH HOH . E 4 HOH A 7 407 71 HOH HOH . E 4 HOH A 8 408 19 HOH HOH . E 4 HOH A 9 409 106 HOH HOH . E 4 HOH A 10 410 22 HOH HOH . E 4 HOH A 11 411 88 HOH HOH . E 4 HOH A 12 412 29 HOH HOH . E 4 HOH A 13 413 85 HOH HOH . E 4 HOH A 14 414 47 HOH HOH . E 4 HOH A 15 415 8 HOH HOH . E 4 HOH A 16 416 93 HOH HOH . E 4 HOH A 17 417 26 HOH HOH . E 4 HOH A 18 418 28 HOH HOH . E 4 HOH A 19 419 82 HOH HOH . E 4 HOH A 20 420 45 HOH HOH . E 4 HOH A 21 421 27 HOH HOH . E 4 HOH A 22 422 21 HOH HOH . E 4 HOH A 23 423 11 HOH HOH . E 4 HOH A 24 424 43 HOH HOH . E 4 HOH A 25 425 18 HOH HOH . E 4 HOH A 26 426 2 HOH HOH . E 4 HOH A 27 427 105 HOH HOH . E 4 HOH A 28 428 77 HOH HOH . E 4 HOH A 29 429 32 HOH HOH . E 4 HOH A 30 430 109 HOH HOH . E 4 HOH A 31 431 89 HOH HOH . E 4 HOH A 32 432 49 HOH HOH . E 4 HOH A 33 433 31 HOH HOH . E 4 HOH A 34 434 39 HOH HOH . E 4 HOH A 35 435 50 HOH HOH . E 4 HOH A 36 436 69 HOH HOH . E 4 HOH A 37 437 48 HOH HOH . E 4 HOH A 38 438 4 HOH HOH . E 4 HOH A 39 439 67 HOH HOH . E 4 HOH A 40 440 1 HOH HOH . E 4 HOH A 41 441 55 HOH HOH . E 4 HOH A 42 442 38 HOH HOH . E 4 HOH A 43 443 17 HOH HOH . E 4 HOH A 44 444 10 HOH HOH . E 4 HOH A 45 445 41 HOH HOH . E 4 HOH A 46 446 24 HOH HOH . E 4 HOH A 47 447 6 HOH HOH . E 4 HOH A 48 448 15 HOH HOH . E 4 HOH A 49 449 57 HOH HOH . E 4 HOH A 50 450 34 HOH HOH . E 4 HOH A 51 451 60 HOH HOH . E 4 HOH A 52 452 36 HOH HOH . E 4 HOH A 53 453 59 HOH HOH . E 4 HOH A 54 454 13 HOH HOH . E 4 HOH A 55 455 61 HOH HOH . E 4 HOH A 56 456 16 HOH HOH . E 4 HOH A 57 457 87 HOH HOH . E 4 HOH A 58 458 7 HOH HOH . E 4 HOH A 59 459 20 HOH HOH . E 4 HOH A 60 460 101 HOH HOH . E 4 HOH A 61 461 73 HOH HOH . E 4 HOH A 62 462 14 HOH HOH . E 4 HOH A 63 463 51 HOH HOH . E 4 HOH A 64 464 3 HOH HOH . E 4 HOH A 65 465 40 HOH HOH . E 4 HOH A 66 466 70 HOH HOH . E 4 HOH A 67 467 53 HOH HOH . E 4 HOH A 68 468 54 HOH HOH . E 4 HOH A 69 469 56 HOH HOH . E 4 HOH A 70 470 79 HOH HOH . E 4 HOH A 71 471 90 HOH HOH . E 4 HOH A 72 472 44 HOH HOH . E 4 HOH A 73 473 110 HOH HOH . E 4 HOH A 74 474 35 HOH HOH . E 4 HOH A 75 475 112 HOH HOH . E 4 HOH A 76 476 108 HOH HOH . E 4 HOH A 77 477 46 HOH HOH . E 4 HOH A 78 478 30 HOH HOH . E 4 HOH A 79 479 66 HOH HOH . E 4 HOH A 80 480 80 HOH HOH . E 4 HOH A 81 481 62 HOH HOH . E 4 HOH A 82 482 5 HOH HOH . E 4 HOH A 83 483 91 HOH HOH . E 4 HOH A 84 484 63 HOH HOH . E 4 HOH A 85 485 25 HOH HOH . E 4 HOH A 86 486 9 HOH HOH . E 4 HOH A 87 487 12 HOH HOH . E 4 HOH A 88 488 99 HOH HOH . E 4 HOH A 89 489 42 HOH HOH . E 4 HOH A 90 490 96 HOH HOH . E 4 HOH A 91 491 84 HOH HOH . E 4 HOH A 92 492 58 HOH HOH . E 4 HOH A 93 493 102 HOH HOH . E 4 HOH A 94 494 98 HOH HOH . E 4 HOH A 95 495 64 HOH HOH . E 4 HOH A 96 496 83 HOH HOH . E 4 HOH A 97 497 72 HOH HOH . E 4 HOH A 98 498 92 HOH HOH . E 4 HOH A 99 499 81 HOH HOH . E 4 HOH A 100 500 114 HOH HOH . E 4 HOH A 101 501 107 HOH HOH . E 4 HOH A 102 502 65 HOH HOH . E 4 HOH A 103 503 104 HOH HOH . E 4 HOH A 104 504 94 HOH HOH . E 4 HOH A 105 505 75 HOH HOH . E 4 HOH A 106 506 113 HOH HOH . E 4 HOH A 107 507 95 HOH HOH . E 4 HOH A 108 508 86 HOH HOH . E 4 HOH A 109 509 103 HOH HOH . E 4 HOH A 110 510 115 HOH HOH . E 4 HOH A 111 511 33 HOH HOH . E 4 HOH A 112 512 68 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 20.234 _atom_site.Cartn_y -10.682 _atom_site.Cartn_z -14.335 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #