data_8HYK # _model_server_result.job_id 5YII4WqYVVuGuN9NIURa2Q _model_server_result.datetime_utc '2024-11-14 18:23:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8hyk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8HYK # _exptl.entry_id 8HYK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.019 _cell.angle_gamma 90 _cell.entry_id 8HYK _cell.length_a 41.418 _cell.length_b 56.94 _cell.length_c 64.812 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8HYK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 67 A ASP 67 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc2 B O13 NE0 . A NE0 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc3 B O16 NE0 . A NE0 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc4 B O21 NE0 . A NE0 401 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8HYK _atom_sites.fract_transf_matrix[1][1] 0.024144 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002973 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017562 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015546 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NE0 A 1 401 401 NE0 LIG . C 3 MG A 1 402 402 MG MG . D 4 HOH A 1 501 613 HOH HOH . D 4 HOH A 2 502 648 HOH HOH . D 4 HOH A 3 503 679 HOH HOH . D 4 HOH A 4 504 642 HOH HOH . D 4 HOH A 5 505 517 HOH HOH . D 4 HOH A 6 506 685 HOH HOH . D 4 HOH A 7 507 533 HOH HOH . D 4 HOH A 8 508 633 HOH HOH . D 4 HOH A 9 509 541 HOH HOH . D 4 HOH A 10 510 588 HOH HOH . D 4 HOH A 11 511 549 HOH HOH . D 4 HOH A 12 512 607 HOH HOH . D 4 HOH A 13 513 668 HOH HOH . D 4 HOH A 14 514 637 HOH HOH . D 4 HOH A 15 515 566 HOH HOH . D 4 HOH A 16 516 524 HOH HOH . D 4 HOH A 17 517 532 HOH HOH . D 4 HOH A 18 518 626 HOH HOH . D 4 HOH A 19 519 558 HOH HOH . D 4 HOH A 20 520 660 HOH HOH . D 4 HOH A 21 521 581 HOH HOH . D 4 HOH A 22 522 587 HOH HOH . D 4 HOH A 23 523 619 HOH HOH . D 4 HOH A 24 524 655 HOH HOH . D 4 HOH A 25 525 664 HOH HOH . D 4 HOH A 26 526 579 HOH HOH . D 4 HOH A 27 527 646 HOH HOH . D 4 HOH A 28 528 621 HOH HOH . D 4 HOH A 29 529 582 HOH HOH . D 4 HOH A 30 530 605 HOH HOH . D 4 HOH A 31 531 678 HOH HOH . D 4 HOH A 32 532 545 HOH HOH . D 4 HOH A 33 533 528 HOH HOH . D 4 HOH A 34 534 568 HOH HOH . D 4 HOH A 35 535 654 HOH HOH . D 4 HOH A 36 536 580 HOH HOH . D 4 HOH A 37 537 500 HOH HOH . D 4 HOH A 38 538 590 HOH HOH . D 4 HOH A 39 539 520 HOH HOH . D 4 HOH A 40 540 609 HOH HOH . D 4 HOH A 41 541 611 HOH HOH . D 4 HOH A 42 542 556 HOH HOH . D 4 HOH A 43 543 527 HOH HOH . D 4 HOH A 44 544 628 HOH HOH . D 4 HOH A 45 545 583 HOH HOH . D 4 HOH A 46 546 640 HOH HOH . D 4 HOH A 47 547 627 HOH HOH . D 4 HOH A 48 548 518 HOH HOH . D 4 HOH A 49 549 570 HOH HOH . D 4 HOH A 50 550 650 HOH HOH . D 4 HOH A 51 551 526 HOH HOH . D 4 HOH A 52 552 531 HOH HOH . D 4 HOH A 53 553 555 HOH HOH . D 4 HOH A 54 554 505 HOH HOH . D 4 HOH A 55 555 663 HOH HOH . D 4 HOH A 56 556 560 HOH HOH . D 4 HOH A 57 557 547 HOH HOH . D 4 HOH A 58 558 550 HOH HOH . D 4 HOH A 59 559 665 HOH HOH . D 4 HOH A 60 560 574 HOH HOH . D 4 HOH A 61 561 548 HOH HOH . D 4 HOH A 62 562 539 HOH HOH . D 4 HOH A 63 563 523 HOH HOH . D 4 HOH A 64 564 508 HOH HOH . D 4 HOH A 65 565 592 HOH HOH . D 4 HOH A 66 566 641 HOH HOH . D 4 HOH A 67 567 516 HOH HOH . D 4 HOH A 68 568 573 HOH HOH . D 4 HOH A 69 569 622 HOH HOH . D 4 HOH A 70 570 669 HOH HOH . D 4 HOH A 71 571 614 HOH HOH . D 4 HOH A 72 572 576 HOH HOH . D 4 HOH A 73 573 606 HOH HOH . D 4 HOH A 74 574 569 HOH HOH . D 4 HOH A 75 575 519 HOH HOH . D 4 HOH A 76 576 586 HOH HOH . D 4 HOH A 77 577 542 HOH HOH . D 4 HOH A 78 578 647 HOH HOH . D 4 HOH A 79 579 596 HOH HOH . D 4 HOH A 80 580 554 HOH HOH . D 4 HOH A 81 581 504 HOH HOH . D 4 HOH A 82 582 561 HOH HOH . D 4 HOH A 83 583 511 HOH HOH . D 4 HOH A 84 584 552 HOH HOH . D 4 HOH A 85 585 673 HOH HOH . D 4 HOH A 86 586 522 HOH HOH . D 4 HOH A 87 587 635 HOH HOH . D 4 HOH A 88 588 536 HOH HOH . D 4 HOH A 89 589 599 HOH HOH . D 4 HOH A 90 590 643 HOH HOH . D 4 HOH A 91 591 623 HOH HOH . D 4 HOH A 92 592 666 HOH HOH . D 4 HOH A 93 593 564 HOH HOH . D 4 HOH A 94 594 507 HOH HOH . D 4 HOH A 95 595 636 HOH HOH . D 4 HOH A 96 596 661 HOH HOH . D 4 HOH A 97 597 565 HOH HOH . D 4 HOH A 98 598 559 HOH HOH . D 4 HOH A 99 599 509 HOH HOH . D 4 HOH A 100 600 644 HOH HOH . D 4 HOH A 101 601 680 HOH HOH . D 4 HOH A 102 602 615 HOH HOH . D 4 HOH A 103 603 557 HOH HOH . D 4 HOH A 104 604 602 HOH HOH . D 4 HOH A 105 605 634 HOH HOH . D 4 HOH A 106 606 534 HOH HOH . D 4 HOH A 107 607 521 HOH HOH . D 4 HOH A 108 608 608 HOH HOH . D 4 HOH A 109 609 567 HOH HOH . D 4 HOH A 110 610 631 HOH HOH . D 4 HOH A 111 611 589 HOH HOH . D 4 HOH A 112 612 535 HOH HOH . D 4 HOH A 113 613 616 HOH HOH . D 4 HOH A 114 614 551 HOH HOH . D 4 HOH A 115 615 513 HOH HOH . D 4 HOH A 116 616 658 HOH HOH . D 4 HOH A 117 617 538 HOH HOH . D 4 HOH A 118 618 515 HOH HOH . D 4 HOH A 119 619 662 HOH HOH . D 4 HOH A 120 620 597 HOH HOH . D 4 HOH A 121 621 618 HOH HOH . D 4 HOH A 122 622 610 HOH HOH . D 4 HOH A 123 623 653 HOH HOH . D 4 HOH A 124 624 572 HOH HOH . D 4 HOH A 125 625 546 HOH HOH . D 4 HOH A 126 626 530 HOH HOH . D 4 HOH A 127 627 639 HOH HOH . D 4 HOH A 128 628 506 HOH HOH . D 4 HOH A 129 629 651 HOH HOH . D 4 HOH A 130 630 612 HOH HOH . D 4 HOH A 131 631 563 HOH HOH . D 4 HOH A 132 632 585 HOH HOH . D 4 HOH A 133 633 510 HOH HOH . D 4 HOH A 134 634 525 HOH HOH . D 4 HOH A 135 635 529 HOH HOH . D 4 HOH A 136 636 594 HOH HOH . D 4 HOH A 137 637 625 HOH HOH . D 4 HOH A 138 638 575 HOH HOH . D 4 HOH A 139 639 632 HOH HOH . D 4 HOH A 140 640 652 HOH HOH . D 4 HOH A 141 641 591 HOH HOH . D 4 HOH A 142 642 601 HOH HOH . D 4 HOH A 143 643 600 HOH HOH . D 4 HOH A 144 644 512 HOH HOH . D 4 HOH A 145 645 540 HOH HOH . D 4 HOH A 146 646 617 HOH HOH . D 4 HOH A 147 647 598 HOH HOH . D 4 HOH A 148 648 578 HOH HOH . D 4 HOH A 149 649 501 HOH HOH . D 4 HOH A 150 650 638 HOH HOH . D 4 HOH A 151 651 595 HOH HOH . D 4 HOH A 152 652 604 HOH HOH . D 4 HOH A 153 653 514 HOH HOH . D 4 HOH A 154 654 502 HOH HOH . D 4 HOH A 155 655 537 HOH HOH . D 4 HOH A 156 656 603 HOH HOH . D 4 HOH A 157 657 681 HOH HOH . D 4 HOH A 158 658 649 HOH HOH . D 4 HOH A 159 659 659 HOH HOH . D 4 HOH A 160 660 656 HOH HOH . D 4 HOH A 161 661 503 HOH HOH . D 4 HOH A 162 662 684 HOH HOH . D 4 HOH A 163 663 657 HOH HOH . D 4 HOH A 164 664 544 HOH HOH . D 4 HOH A 165 665 593 HOH HOH . D 4 HOH A 166 666 543 HOH HOH . D 4 HOH A 167 667 645 HOH HOH . D 4 HOH A 168 668 577 HOH HOH . D 4 HOH A 169 669 553 HOH HOH . D 4 HOH A 170 670 682 HOH HOH . D 4 HOH A 171 671 562 HOH HOH . D 4 HOH A 172 672 671 HOH HOH . D 4 HOH A 173 673 674 HOH HOH . D 4 HOH A 174 674 571 HOH HOH . D 4 HOH A 175 675 584 HOH HOH . D 4 HOH A 176 676 676 HOH HOH . D 4 HOH A 177 677 675 HOH HOH . D 4 HOH A 178 678 667 HOH HOH . D 4 HOH A 179 679 683 HOH HOH . D 4 HOH A 180 680 670 HOH HOH . D 4 HOH A 181 681 686 HOH HOH . D 4 HOH A 182 682 629 HOH HOH . D 4 HOH A 183 683 620 HOH HOH . D 4 HOH A 184 684 624 HOH HOH . D 4 HOH A 185 685 677 HOH HOH . D 4 HOH A 186 686 672 HOH HOH . D 4 HOH A 187 687 630 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -1.225 _atom_site.Cartn_y -4.335 _atom_site.Cartn_z 22.966 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.12 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #