data_8I1O
#
_model_server_result.job_id            fbweB_ukUeFSQKeWhJcUzg 
_model_server_result.datetime_utc      '2024-11-26 19:46:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8i1o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":302}' 
#
_entry.id    8I1O 
#
_exptl.entry_id    8I1O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              427.284 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-PHOSPHOSULFATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.44 
_cell.angle_gamma         90 
_cell.entry_id            8I1O 
_cell.length_a            64.725 
_cell.length_b            53.035 
_cell.length_c            130.639 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8I1O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,M,N 1 1 
C,D,I,J,K,L,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 H N N 
? 3 J N N 
? 3 L N N 
#
_chem_comp.formula           'C10 H14 N5 O10 P S' 
_chem_comp.formula_weight    427.284 
_chem_comp.id                ADX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-PHOSPHOSULFATE" 
_chem_comp.type              'rna linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
SB O1B ADX doub 45 n n 
SB O2B ADX doub 46 n n 
SB O3B ADX sing 47 n n 
SB O3A ADX sing 48 n n 
O3B HOB3 ADX sing 49 n n 
PA O1A ADX doub 50 n n 
PA O2A ADX sing 51 n n 
PA O3A ADX sing 52 n n 
PA O5' ADX sing 53 n n 
O2A HOA2 ADX sing 54 n n 
O5' C5' ADX sing 55 n n 
C5' C4' ADX sing 56 n n 
C5' H5' ADX sing 57 n n 
C5' "H5''" ADX sing 58 n n 
C4' O4' ADX sing 59 n n 
C4' C3' ADX sing 60 n n 
C4' H4' ADX sing 61 n n 
O4' C1' ADX sing 62 n n 
C3' O3' ADX sing 63 n n 
C3' C2' ADX sing 64 n n 
C3' H3' ADX sing 65 n n 
O3' HO3' ADX sing 66 n n 
C2' O2' ADX sing 67 n n 
C2' C1' ADX sing 68 n n 
C2' H2' ADX sing 69 n n 
O2' HO2' ADX sing 70 n n 
C1' N9 ADX sing 71 n n 
C1' H1' ADX sing 72 n n 
N9 C8 ADX sing 73 n y 
N9 C4 ADX sing 74 n y 
C8 N7 ADX doub 75 n y 
C8 H8 ADX sing 76 n n 
N7 C5 ADX sing 77 n y 
C5 C6 ADX sing 78 n y 
C5 C4 ADX doub 79 n y 
C6 N6 ADX sing 80 n n 
C6 N1 ADX doub 81 n y 
N6 HN61 ADX sing 82 n n 
N6 HN62 ADX sing 83 n n 
N1 C2 ADX sing 84 n y 
C2 N3 ADX doub 85 n y 
C2 H2 ADX sing 86 n n 
N3 C4 ADX sing 87 n y 
#
_atom_sites.entry_id                     8I1O 
_atom_sites.fract_transf_matrix[1][1]    0.01545 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003408 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018855 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007839 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ADP A 1 301 301 ADP ADP . 
F 3 ADX A 1 302 302 ADX ADX . 
G 2 ADP B 1 301 301 ADP ADP . 
H 3 ADX B 1 302 302 ADX ADX . 
I 2 ADP C 1 301 301 ADP ADP . 
J 3 ADX C 1 302 302 ADX ADX . 
K 2 ADP D 1 301 301 ADP ADP . 
L 3 ADX D 1 302 302 ADX ADX . 
M 4 HOH A 1 401 97 HOH HOH . 
M 4 HOH A 2 402 76 HOH HOH . 
M 4 HOH A 3 403 106 HOH HOH . 
M 4 HOH A 4 404 1 HOH HOH . 
M 4 HOH A 5 405 34 HOH HOH . 
M 4 HOH A 6 406 132 HOH HOH . 
M 4 HOH A 7 407 9 HOH HOH . 
M 4 HOH A 8 408 43 HOH HOH . 
M 4 HOH A 9 409 7 HOH HOH . 
M 4 HOH A 10 410 141 HOH HOH . 
M 4 HOH A 11 411 13 HOH HOH . 
M 4 HOH A 12 412 129 HOH HOH . 
M 4 HOH A 13 413 11 HOH HOH . 
M 4 HOH A 14 414 123 HOH HOH . 
M 4 HOH A 15 415 78 HOH HOH . 
M 4 HOH A 16 416 79 HOH HOH . 
M 4 HOH A 17 417 135 HOH HOH . 
M 4 HOH A 18 418 40 HOH HOH . 
M 4 HOH A 19 419 24 HOH HOH . 
M 4 HOH A 20 420 48 HOH HOH . 
M 4 HOH A 21 421 120 HOH HOH . 
M 4 HOH A 22 422 131 HOH HOH . 
M 4 HOH A 23 423 21 HOH HOH . 
M 4 HOH A 24 424 115 HOH HOH . 
M 4 HOH A 25 425 51 HOH HOH . 
M 4 HOH A 26 426 27 HOH HOH . 
M 4 HOH A 27 427 63 HOH HOH . 
M 4 HOH A 28 428 19 HOH HOH . 
M 4 HOH A 29 429 113 HOH HOH . 
M 4 HOH A 30 430 60 HOH HOH . 
M 4 HOH A 31 431 140 HOH HOH . 
M 4 HOH A 32 432 35 HOH HOH . 
M 4 HOH A 33 433 93 HOH HOH . 
M 4 HOH A 34 434 22 HOH HOH . 
M 4 HOH A 35 435 82 HOH HOH . 
M 4 HOH A 36 436 72 HOH HOH . 
M 4 HOH A 37 437 142 HOH HOH . 
M 4 HOH A 38 438 145 HOH HOH . 
M 4 HOH A 39 439 149 HOH HOH . 
M 4 HOH A 40 440 137 HOH HOH . 
M 4 HOH A 41 441 103 HOH HOH . 
M 4 HOH A 42 442 151 HOH HOH . 
M 4 HOH A 43 443 26 HOH HOH . 
M 4 HOH A 44 444 116 HOH HOH . 
M 4 HOH A 45 445 152 HOH HOH . 
M 4 HOH A 46 446 148 HOH HOH . 
M 4 HOH A 47 447 112 HOH HOH . 
M 4 HOH A 48 448 146 HOH HOH . 
M 4 HOH A 49 449 144 HOH HOH . 
M 4 HOH A 50 450 100 HOH HOH . 
N 4 HOH B 1 401 95 HOH HOH . 
N 4 HOH B 2 402 90 HOH HOH . 
N 4 HOH B 3 403 96 HOH HOH . 
N 4 HOH B 4 404 42 HOH HOH . 
N 4 HOH B 5 405 80 HOH HOH . 
N 4 HOH B 6 406 28 HOH HOH . 
N 4 HOH B 7 407 52 HOH HOH . 
N 4 HOH B 8 408 15 HOH HOH . 
N 4 HOH B 9 409 23 HOH HOH . 
N 4 HOH B 10 410 118 HOH HOH . 
N 4 HOH B 11 411 99 HOH HOH . 
N 4 HOH B 12 412 5 HOH HOH . 
N 4 HOH B 13 413 156 HOH HOH . 
N 4 HOH B 14 414 41 HOH HOH . 
N 4 HOH B 15 415 25 HOH HOH . 
N 4 HOH B 16 416 54 HOH HOH . 
N 4 HOH B 17 417 105 HOH HOH . 
N 4 HOH B 18 418 154 HOH HOH . 
N 4 HOH B 19 419 98 HOH HOH . 
N 4 HOH B 20 420 83 HOH HOH . 
N 4 HOH B 21 421 53 HOH HOH . 
N 4 HOH B 22 422 29 HOH HOH . 
N 4 HOH B 23 423 110 HOH HOH . 
N 4 HOH B 24 424 31 HOH HOH . 
N 4 HOH B 25 425 126 HOH HOH . 
N 4 HOH B 26 426 14 HOH HOH . 
N 4 HOH B 27 427 33 HOH HOH . 
N 4 HOH B 28 428 91 HOH HOH . 
N 4 HOH B 29 429 158 HOH HOH . 
N 4 HOH B 30 430 155 HOH HOH . 
N 4 HOH B 31 431 134 HOH HOH . 
N 4 HOH B 32 432 62 HOH HOH . 
N 4 HOH B 33 433 153 HOH HOH . 
N 4 HOH B 34 434 37 HOH HOH . 
N 4 HOH B 35 435 47 HOH HOH . 
N 4 HOH B 36 436 130 HOH HOH . 
N 4 HOH B 37 437 150 HOH HOH . 
N 4 HOH B 38 438 88 HOH HOH . 
N 4 HOH B 39 439 46 HOH HOH . 
N 4 HOH B 40 440 70 HOH HOH . 
N 4 HOH B 41 441 157 HOH HOH . 
N 4 HOH B 42 442 147 HOH HOH . 
O 4 HOH C 1 401 125 HOH HOH . 
O 4 HOH C 2 402 108 HOH HOH . 
O 4 HOH C 3 403 136 HOH HOH . 
O 4 HOH C 4 404 81 HOH HOH . 
O 4 HOH C 5 405 57 HOH HOH . 
O 4 HOH C 6 406 10 HOH HOH . 
O 4 HOH C 7 407 107 HOH HOH . 
O 4 HOH C 8 408 92 HOH HOH . 
O 4 HOH C 9 409 16 HOH HOH . 
O 4 HOH C 10 410 102 HOH HOH . 
O 4 HOH C 11 411 75 HOH HOH . 
O 4 HOH C 12 412 64 HOH HOH . 
O 4 HOH C 13 413 18 HOH HOH . 
O 4 HOH C 14 414 12 HOH HOH . 
O 4 HOH C 15 415 6 HOH HOH . 
O 4 HOH C 16 416 36 HOH HOH . 
O 4 HOH C 17 417 87 HOH HOH . 
O 4 HOH C 18 418 124 HOH HOH . 
O 4 HOH C 19 419 74 HOH HOH . 
O 4 HOH C 20 420 4 HOH HOH . 
O 4 HOH C 21 421 44 HOH HOH . 
O 4 HOH C 22 422 59 HOH HOH . 
O 4 HOH C 23 423 66 HOH HOH . 
O 4 HOH C 24 424 89 HOH HOH . 
O 4 HOH C 25 425 139 HOH HOH . 
O 4 HOH C 26 426 119 HOH HOH . 
O 4 HOH C 27 427 114 HOH HOH . 
O 4 HOH C 28 428 121 HOH HOH . 
O 4 HOH C 29 429 101 HOH HOH . 
O 4 HOH C 30 430 67 HOH HOH . 
O 4 HOH C 31 431 30 HOH HOH . 
O 4 HOH C 32 432 86 HOH HOH . 
O 4 HOH C 33 433 49 HOH HOH . 
O 4 HOH C 34 434 2 HOH HOH . 
O 4 HOH C 35 435 159 HOH HOH . 
O 4 HOH C 36 436 50 HOH HOH . 
O 4 HOH C 37 437 32 HOH HOH . 
O 4 HOH C 38 438 65 HOH HOH . 
O 4 HOH C 39 439 69 HOH HOH . 
P 4 HOH D 1 401 55 HOH HOH . 
P 4 HOH D 2 402 85 HOH HOH . 
P 4 HOH D 3 403 71 HOH HOH . 
P 4 HOH D 4 404 73 HOH HOH . 
P 4 HOH D 5 405 68 HOH HOH . 
P 4 HOH D 6 406 8 HOH HOH . 
P 4 HOH D 7 407 3 HOH HOH . 
P 4 HOH D 8 408 20 HOH HOH . 
P 4 HOH D 9 409 58 HOH HOH . 
P 4 HOH D 10 410 38 HOH HOH . 
P 4 HOH D 11 411 77 HOH HOH . 
P 4 HOH D 12 412 127 HOH HOH . 
P 4 HOH D 13 413 61 HOH HOH . 
P 4 HOH D 14 414 45 HOH HOH . 
P 4 HOH D 15 415 94 HOH HOH . 
P 4 HOH D 16 416 104 HOH HOH . 
P 4 HOH D 17 417 138 HOH HOH . 
P 4 HOH D 18 418 39 HOH HOH . 
P 4 HOH D 19 419 17 HOH HOH . 
P 4 HOH D 20 420 56 HOH HOH . 
P 4 HOH D 21 421 122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S SB ADX . . . J 3 -22.637 5.981 -37.561 1 34.89 ? SB ADX 302 C 1 
HETATM 2 O O1B ADX . . . J 3 -22.772 7.481 -37.442 1 36.2 ? O1B ADX 302 C 1 
HETATM 3 O O2B ADX . . . J 3 -22.858 5.516 -38.985 1 31.71 ? O2B ADX 302 C 1 
HETATM 4 O O3B ADX . . . J 3 -21.229 5.663 -37.063 1 39.06 ? O3B ADX 302 C 1 
HETATM 5 P PA ADX . . . J 3 -23.652 3.711 -36.289 1 37.9 ? PA ADX 302 C 1 
HETATM 6 O O1A ADX . . . J 3 -23.08 2.797 -37.242 1 34.03 ? O1A ADX 302 C 1 
HETATM 7 O O2A ADX . . . J 3 -22.932 3.899 -35.017 1 49.32 ? O2A ADX 302 C 1 
HETATM 8 O O3A ADX . . . J 3 -23.758 5.258 -36.768 1 39.92 ? O3A ADX 302 C 1 
HETATM 9 O O5' ADX . . . J 3 -25.063 3.348 -35.679 1 45.6 ? O5' ADX 302 C 1 
HETATM 10 C C5' ADX . . . J 3 -25.26 4.082 -34.421 1 39.6 ? C5' ADX 302 C 1 
HETATM 11 C C4' ADX . . . J 3 -25.492 3.181 -33.216 1 44.1 ? C4' ADX 302 C 1 
HETATM 12 O O4' ADX . . . J 3 -24.474 3.382 -32.205 1 45.05 ? O4' ADX 302 C 1 
HETATM 13 C C3' ADX . . . J 3 -26.809 3.549 -32.49 1 45.43 ? C3' ADX 302 C 1 
HETATM 14 O O3' ADX . . . J 3 -27.495 2.383 -32.078 1 54.06 ? O3' ADX 302 C 1 
HETATM 15 C C2' ADX . . . J 3 -26.405 4.225 -31.367 1 43.93 ? C2' ADX 302 C 1 
HETATM 16 O O2' ADX . . . J 3 -27.31 4.843 -30.601 1 52.25 ? O2' ADX 302 C 1 
HETATM 17 C C1' ADX . . . J 3 -25.076 4.09 -31.203 1 43.09 ? C1' ADX 302 C 1 
HETATM 18 N N9 ADX . . . J 3 -24.199 4.777 -30.436 1 42.69 ? N9 ADX 302 C 1 
HETATM 19 C C8 ADX . . . J 3 -23.258 4.538 -29.496 1 41.69 ? C8 ADX 302 C 1 
HETATM 20 N N7 ADX . . . J 3 -22.574 5.689 -29.253 1 39.31 ? N7 ADX 302 C 1 
HETATM 21 C C5 ADX . . . J 3 -23.031 6.649 -30.067 1 37.25 ? C5 ADX 302 C 1 
HETATM 22 C C6 ADX . . . J 3 -22.714 7.953 -30.263 1 39.23 ? C6 ADX 302 C 1 
HETATM 23 N N6 ADX . . . J 3 -21.741 8.5 -29.534 1 37.9 ? N6 ADX 302 C 1 
HETATM 24 N N1 ADX . . . J 3 -23.346 8.723 -31.166 1 38.82 ? N1 ADX 302 C 1 
HETATM 25 C C2 ADX . . . J 3 -24.347 8.137 -31.933 1 38.18 ? C2 ADX 302 C 1 
HETATM 26 N N3 ADX . . . J 3 -24.662 6.789 -31.721 1 40.25 ? N3 ADX 302 C 1 
HETATM 27 C C4 ADX . . . J 3 -24.012 6.072 -30.789 1 41.16 ? C4 ADX 302 C 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#