data_8I2G # _model_server_result.job_id Lsueo4whbfXQO8cGW7Q8Uw _model_server_result.datetime_utc '2024-11-21 23:15:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i2g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":706}' # _entry.id 8I2G # _exptl.entry_id 8I2G _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8I2G _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I2G _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 N N N ? 10 O N N ? 10 P N N # _pdbx_entity_branch.entity_id 8 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 8 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 8 n H NAG 1 C 1 NAG X 103 NAG 8 n H NAG 2 C 2 NAG X 104 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 22 N CYS 22 1_555 D SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 D SG CYS 99 N CYS 99 1_555 D SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 E SG CYS 1 R CYS 18 1_555 E SG CYS 8 R CYS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 E SG CYS 6 R CYS 23 1_555 E SG CYS 15 R CYS 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 E SG CYS 258 R CYS 275 1_555 E SG CYS 329 R CYS 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 E SG CYS 259 R CYS 276 1_555 E SG CYS 339 R CYS 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf7 E SG CYS 275 R CYS 292 1_555 E SG CYS 321 R CYS 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 E SG CYS 425 R CYS 442 1_555 E SG CYS 500 R CYS 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf9 F SG CYS 7 X CYS 7 1_555 F SG CYS 31 X CYS 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf10 F SG CYS 10 X CYS 10 1_555 F SG CYS 60 X CYS 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf11 F SG CYS 28 X CYS 28 1_555 F SG CYS 82 X CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf12 F SG CYS 32 X CYS 32 1_555 F SG CYS 84 X CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf13 F SG CYS 59 X CYS 59 1_555 F SG CYS 87 X CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf14 G SG CYS 3 Y CYS 3 1_555 G SG CYS 51 Y CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf15 G SG CYS 17 Y CYS 17 1_555 G SG CYS 66 Y CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf16 G SG CYS 20 Y CYS 20 1_555 G SG CYS 104 Y CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf17 G SG CYS 28 Y CYS 28 1_555 G SG CYS 82 Y CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf18 G SG CYS 32 Y CYS 32 1_555 G SG CYS 84 Y CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf19 G SG CYS 87 Y CYS 87 1_555 G SG CYS 94 Y CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 E ND2 ASN 174 R ASN 191 1_555 T C1 NAG . R NAG 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? covale ? covale2 F ND2 ASN 52 X ASN 52 1_555 H C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale3 G ND2 ASN 7 Y ASN 7 1_555 DA C1 NAG . Y NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale4 H O4 NAG . C NAG 1 1_555 H C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 477 n n C1 O2 PLM doub 478 n n C1 C2 PLM sing 479 n n O1 H PLM sing 480 n n C2 C3 PLM sing 481 n n C2 H21 PLM sing 482 n n C2 H22 PLM sing 483 n n C3 C4 PLM sing 484 n n C3 H31 PLM sing 485 n n C3 H32 PLM sing 486 n n C4 C5 PLM sing 487 n n C4 H41 PLM sing 488 n n C4 H42 PLM sing 489 n n C5 C6 PLM sing 490 n n C5 H51 PLM sing 491 n n C5 H52 PLM sing 492 n n C6 C7 PLM sing 493 n n C6 H61 PLM sing 494 n n C6 H62 PLM sing 495 n n C7 C8 PLM sing 496 n n C7 H71 PLM sing 497 n n C7 H72 PLM sing 498 n n C8 C9 PLM sing 499 n n C8 H81 PLM sing 500 n n C8 H82 PLM sing 501 n n C9 CA PLM sing 502 n n C9 H91 PLM sing 503 n n C9 H92 PLM sing 504 n n CA CB PLM sing 505 n n CA HA1 PLM sing 506 n n CA HA2 PLM sing 507 n n CB CC PLM sing 508 n n CB HB1 PLM sing 509 n n CB HB2 PLM sing 510 n n CC CD PLM sing 511 n n CC HC1 PLM sing 512 n n CC HC2 PLM sing 513 n n CD CE PLM sing 514 n n CD HD1 PLM sing 515 n n CD HD2 PLM sing 516 n n CE CF PLM sing 517 n n CE HE1 PLM sing 518 n n CE HE2 PLM sing 519 n n CF CG PLM sing 520 n n CF HF1 PLM sing 521 n n CF HF2 PLM sing 522 n n CG HG1 PLM sing 523 n n CG HG2 PLM sing 524 n n CG HG3 PLM sing 525 n n # _atom_sites.entry_id 8I2G _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 CLR R 1 701 702 CLR CLR . J 9 CLR R 1 702 704 CLR CLR . K 9 CLR R 1 703 705 CLR CLR . L 9 CLR R 1 704 706 CLR CLR . M 9 CLR R 1 705 707 CLR CLR . N 10 PLM R 1 706 708 PLM PLM . O 10 PLM R 1 707 709 PLM PLM . P 10 PLM R 1 708 710 PLM PLM . Q 11 MYR R 1 709 711 MYR MYR . R 11 MYR R 1 710 712 MYR MYR . S 9 CLR R 1 711 713 CLR CLR . T 12 NAG R 1 712 714 NAG NAG . U 9 CLR R 1 713 715 CLR CLR . V 9 CLR R 1 714 716 CLR CLR . W 9 CLR R 1 715 717 CLR CLR . X 9 CLR R 1 716 718 CLR CLR . Y 9 CLR R 1 717 719 CLR CLR . Z 9 CLR R 1 718 720 CLR CLR . AA 9 CLR R 1 719 721 CLR CLR . BA 13 O6F R 1 720 722 O6F LIG . CA 12 NAG X 1 101 102 NAG NAG . DA 12 NAG Y 1 201 201 NAG NAG . EA 12 NAG Y 1 202 202 NAG NAG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . N 10 117.545 153.094 151.345 1 64.25 ? C1 PLM 706 R 1 HETATM 2 O O1 PLM . . . N 10 116.968 152.183 152 1 63.87 ? O1 PLM 706 R 1 HETATM 3 O O2 PLM . . . N 10 118.314 154.003 151.764 1 63.75 ? O2 PLM 706 R 1 HETATM 4 C C2 PLM . . . N 10 117.254 153.074 149.803 1 64.07 ? C2 PLM 706 R 1 HETATM 5 C C3 PLM . . . N 10 115.777 152.984 149.408 1 64.15 ? C3 PLM 706 R 1 HETATM 6 C C4 PLM . . . N 10 115.233 151.548 149.322 1 63.79 ? C4 PLM 706 R 1 HETATM 7 C C5 PLM . . . N 10 114.852 151.114 147.897 1 63.89 ? C5 PLM 706 R 1 HETATM 8 C C6 PLM . . . N 10 116.028 151.077 146.906 1 63.84 ? C6 PLM 706 R 1 HETATM 9 C C7 PLM . . . N 10 117.097 150.026 147.244 1 63.5 ? C7 PLM 706 R 1 HETATM 10 C C8 PLM . . . N 10 118.032 149.691 146.072 1 63.65 ? C8 PLM 706 R 1 HETATM 11 C C9 PLM . . . N 10 117.47 148.616 145.133 1 63.69 ? C9 PLM 706 R 1 HETATM 12 C CA PLM . . . N 10 117.746 148.867 143.642 1 63.67 ? CA PLM 706 R 1 HETATM 13 C CB PLM . . . N 10 116.831 148.054 142.718 1 63.78 ? CB PLM 706 R 1 HETATM 14 C CC PLM . . . N 10 117.037 148.319 141.222 1 63.36 ? CC PLM 706 R 1 HETATM 15 C CD PLM . . . N 10 115.863 147.834 140.36 1 63.64 ? CD PLM 706 R 1 HETATM 16 C CE PLM . . . N 10 116.196 147.686 138.87 1 63.77 ? CE PLM 706 R 1 HETATM 17 C CF PLM . . . N 10 114.978 147.335 138.003 1 63.57 ? CF PLM 706 R 1 HETATM 18 C CG PLM . . . N 10 115.346 146.67 136.671 1 63.7 ? CG PLM 706 R 1 HETATM 19 H H21 PLM . . . N 10 117.822 152.238 149.373 1 63.41 ? H21 PLM 706 R 1 HETATM 20 H H22 PLM . . . N 10 117.704 153.985 149.378 1 63.36 ? H22 PLM 706 R 1 HETATM 21 H H31 PLM . . . N 10 115.637 153.494 148.446 1 63.43 ? H31 PLM 706 R 1 HETATM 22 H H32 PLM . . . N 10 115.182 153.562 150.13 1 63.46 ? H32 PLM 706 R 1 HETATM 23 H H41 PLM . . . N 10 114.349 151.449 149.973 1 63.41 ? H41 PLM 706 R 1 HETATM 24 H H42 PLM . . . N 10 115.982 150.847 149.723 1 63.44 ? H42 PLM 706 R 1 HETATM 25 H H51 PLM . . . N 10 114.079 151.796 147.511 1 63.44 ? H51 PLM 706 R 1 HETATM 26 H H52 PLM . . . N 10 114.383 150.119 147.937 1 63.46 ? H52 PLM 706 R 1 HETATM 27 H H61 PLM . . . N 10 116.5 152.07 146.862 1 63.38 ? H61 PLM 706 R 1 HETATM 28 H H62 PLM . . . N 10 115.64 150.882 145.894 1 63.45 ? H62 PLM 706 R 1 HETATM 29 H H71 PLM . . . N 10 116.6 149.103 147.582 1 63.4 ? H71 PLM 706 R 1 HETATM 30 H H72 PLM . . . N 10 117.695 150.377 148.096 1 63.27 ? H72 PLM 706 R 1 HETATM 31 H H81 PLM . . . N 10 119.003 149.358 146.466 1 63.32 ? H81 PLM 706 R 1 HETATM 32 H H82 PLM . . . N 10 118.234 150.608 145.497 1 63.37 ? H82 PLM 706 R 1 HETATM 33 H H91 PLM . . . N 10 116.384 148.537 145.287 1 63.49 ? H91 PLM 706 R 1 HETATM 34 H H92 PLM . . . N 10 117.887 147.638 145.416 1 63.31 ? H92 PLM 706 R 1 HETATM 35 H HA1 PLM . . . N 10 118.796 148.625 143.419 1 63.25 ? HA1 PLM 706 R 1 HETATM 36 H HA2 PLM . . . N 10 117.624 149.937 143.423 1 63.43 ? HA2 PLM 706 R 1 HETATM 37 H HB1 PLM . . . N 10 115.784 148.267 142.976 1 63.47 ? HB1 PLM 706 R 1 HETATM 38 H HB2 PLM . . . N 10 116.981 146.983 142.917 1 63.36 ? HB2 PLM 706 R 1 HETATM 39 H HC1 PLM . . . N 10 117.962 147.826 140.888 1 63.27 ? HC1 PLM 706 R 1 HETATM 40 H HC2 PLM . . . N 10 117.187 149.397 141.061 1 63.38 ? HC2 PLM 706 R 1 HETATM 41 H HD1 PLM . . . N 10 115.02 148.534 140.472 1 63.4 ? HD1 PLM 706 R 1 HETATM 42 H HD2 PLM . . . N 10 115.507 146.868 140.747 1 63.43 ? HD2 PLM 706 R 1 HETATM 43 H HE1 PLM . . . N 10 116.965 146.908 138.744 1 63.43 ? HE1 PLM 706 R 1 HETATM 44 H HE2 PLM . . . N 10 116.644 148.622 138.502 1 63.39 ? HE2 PLM 706 R 1 HETATM 45 H HF1 PLM . . . N 10 114.4 148.251 137.806 1 63.4 ? HF1 PLM 706 R 1 HETATM 46 H HF2 PLM . . . N 10 114.311 146.67 138.571 1 63.39 ? HF2 PLM 706 R 1 HETATM 47 H HG1 PLM . . . N 10 114.458 146.493 136.053 1 63.45 ? HG1 PLM 706 R 1 HETATM 48 H HG2 PLM . . . N 10 115.835 145.702 136.834 1 63.46 ? HG2 PLM 706 R 1 HETATM 49 H HG3 PLM . . . N 10 116.037 147.296 136.092 1 63.38 ? HG3 PLM 706 R 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 49 #