data_8I2Q # _model_server_result.job_id jOJGogzQojrQX0fB_VU1NA _model_server_result.datetime_utc '2024-11-18 10:46:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i2q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 8I2Q # _exptl.entry_id 8I2Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8I2Q _cell.length_a 54.456 _cell.length_b 82.096 _cell.length_c 99.727 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I2Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 317 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 315 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 373 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 371 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.998 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 8I2Q _atom_sites.fract_transf_matrix[1][1] 0.018363 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012181 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010027 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 601 601 GOL GOL . C 2 GOL A 1 602 602 GOL GOL . D 3 HOH A 1 701 182 HOH HOH . D 3 HOH A 2 702 35 HOH HOH . D 3 HOH A 3 703 91 HOH HOH . D 3 HOH A 4 704 256 HOH HOH . D 3 HOH A 5 705 149 HOH HOH . D 3 HOH A 6 706 133 HOH HOH . D 3 HOH A 7 707 139 HOH HOH . D 3 HOH A 8 708 108 HOH HOH . D 3 HOH A 9 709 46 HOH HOH . D 3 HOH A 10 710 36 HOH HOH . D 3 HOH A 11 711 239 HOH HOH . D 3 HOH A 12 712 73 HOH HOH . D 3 HOH A 13 713 162 HOH HOH . D 3 HOH A 14 714 146 HOH HOH . D 3 HOH A 15 715 87 HOH HOH . D 3 HOH A 16 716 255 HOH HOH . D 3 HOH A 17 717 21 HOH HOH . D 3 HOH A 18 718 150 HOH HOH . D 3 HOH A 19 719 101 HOH HOH . D 3 HOH A 20 720 70 HOH HOH . D 3 HOH A 21 721 11 HOH HOH . D 3 HOH A 22 722 86 HOH HOH . D 3 HOH A 23 723 122 HOH HOH . D 3 HOH A 24 724 204 HOH HOH . D 3 HOH A 25 725 216 HOH HOH . D 3 HOH A 26 726 22 HOH HOH . D 3 HOH A 27 727 2 HOH HOH . D 3 HOH A 28 728 210 HOH HOH . D 3 HOH A 29 729 37 HOH HOH . D 3 HOH A 30 730 117 HOH HOH . D 3 HOH A 31 731 152 HOH HOH . D 3 HOH A 32 732 203 HOH HOH . D 3 HOH A 33 733 13 HOH HOH . D 3 HOH A 34 734 230 HOH HOH . D 3 HOH A 35 735 9 HOH HOH . D 3 HOH A 36 736 189 HOH HOH . D 3 HOH A 37 737 147 HOH HOH . D 3 HOH A 38 738 200 HOH HOH . D 3 HOH A 39 739 7 HOH HOH . D 3 HOH A 40 740 6 HOH HOH . D 3 HOH A 41 741 174 HOH HOH . D 3 HOH A 42 742 229 HOH HOH . D 3 HOH A 43 743 50 HOH HOH . D 3 HOH A 44 744 195 HOH HOH . D 3 HOH A 45 745 112 HOH HOH . D 3 HOH A 46 746 54 HOH HOH . D 3 HOH A 47 747 28 HOH HOH . D 3 HOH A 48 748 264 HOH HOH . D 3 HOH A 49 749 136 HOH HOH . D 3 HOH A 50 750 241 HOH HOH . D 3 HOH A 51 751 25 HOH HOH . D 3 HOH A 52 752 164 HOH HOH . D 3 HOH A 53 753 243 HOH HOH . D 3 HOH A 54 754 43 HOH HOH . D 3 HOH A 55 755 249 HOH HOH . D 3 HOH A 56 756 205 HOH HOH . D 3 HOH A 57 757 93 HOH HOH . D 3 HOH A 58 758 252 HOH HOH . D 3 HOH A 59 759 32 HOH HOH . D 3 HOH A 60 760 170 HOH HOH . D 3 HOH A 61 761 67 HOH HOH . D 3 HOH A 62 762 98 HOH HOH . D 3 HOH A 63 763 88 HOH HOH . D 3 HOH A 64 764 132 HOH HOH . D 3 HOH A 65 765 166 HOH HOH . D 3 HOH A 66 766 176 HOH HOH . D 3 HOH A 67 767 116 HOH HOH . D 3 HOH A 68 768 31 HOH HOH . D 3 HOH A 69 769 127 HOH HOH . D 3 HOH A 70 770 56 HOH HOH . D 3 HOH A 71 771 141 HOH HOH . D 3 HOH A 72 772 29 HOH HOH . D 3 HOH A 73 773 193 HOH HOH . D 3 HOH A 74 774 55 HOH HOH . D 3 HOH A 75 775 226 HOH HOH . D 3 HOH A 76 776 194 HOH HOH . D 3 HOH A 77 777 263 HOH HOH . D 3 HOH A 78 778 119 HOH HOH . D 3 HOH A 79 779 198 HOH HOH . D 3 HOH A 80 780 223 HOH HOH . D 3 HOH A 81 781 206 HOH HOH . D 3 HOH A 82 782 123 HOH HOH . D 3 HOH A 83 783 183 HOH HOH . D 3 HOH A 84 784 27 HOH HOH . D 3 HOH A 85 785 201 HOH HOH . D 3 HOH A 86 786 82 HOH HOH . D 3 HOH A 87 787 66 HOH HOH . D 3 HOH A 88 788 1 HOH HOH . D 3 HOH A 89 789 157 HOH HOH . D 3 HOH A 90 790 155 HOH HOH . D 3 HOH A 91 791 107 HOH HOH . D 3 HOH A 92 792 64 HOH HOH . D 3 HOH A 93 793 8 HOH HOH . D 3 HOH A 94 794 40 HOH HOH . D 3 HOH A 95 795 151 HOH HOH . D 3 HOH A 96 796 191 HOH HOH . D 3 HOH A 97 797 24 HOH HOH . D 3 HOH A 98 798 61 HOH HOH . D 3 HOH A 99 799 154 HOH HOH . D 3 HOH A 100 800 225 HOH HOH . D 3 HOH A 101 801 259 HOH HOH . D 3 HOH A 102 802 4 HOH HOH . D 3 HOH A 103 803 3 HOH HOH . D 3 HOH A 104 804 235 HOH HOH . D 3 HOH A 105 805 173 HOH HOH . D 3 HOH A 106 806 33 HOH HOH . D 3 HOH A 107 807 14 HOH HOH . D 3 HOH A 108 808 224 HOH HOH . D 3 HOH A 109 809 71 HOH HOH . D 3 HOH A 110 810 78 HOH HOH . D 3 HOH A 111 811 45 HOH HOH . D 3 HOH A 112 812 120 HOH HOH . D 3 HOH A 113 813 187 HOH HOH . D 3 HOH A 114 814 41 HOH HOH . D 3 HOH A 115 815 44 HOH HOH . D 3 HOH A 116 816 129 HOH HOH . D 3 HOH A 117 817 34 HOH HOH . D 3 HOH A 118 818 30 HOH HOH . D 3 HOH A 119 819 111 HOH HOH . D 3 HOH A 120 820 126 HOH HOH . D 3 HOH A 121 821 227 HOH HOH . D 3 HOH A 122 822 52 HOH HOH . D 3 HOH A 123 823 57 HOH HOH . D 3 HOH A 124 824 10 HOH HOH . D 3 HOH A 125 825 68 HOH HOH . D 3 HOH A 126 826 240 HOH HOH . D 3 HOH A 127 827 177 HOH HOH . D 3 HOH A 128 828 39 HOH HOH . D 3 HOH A 129 829 16 HOH HOH . D 3 HOH A 130 830 18 HOH HOH . D 3 HOH A 131 831 180 HOH HOH . D 3 HOH A 132 832 231 HOH HOH . D 3 HOH A 133 833 115 HOH HOH . D 3 HOH A 134 834 90 HOH HOH . D 3 HOH A 135 835 130 HOH HOH . D 3 HOH A 136 836 124 HOH HOH . D 3 HOH A 137 837 75 HOH HOH . D 3 HOH A 138 838 81 HOH HOH . D 3 HOH A 139 839 163 HOH HOH . D 3 HOH A 140 840 5 HOH HOH . D 3 HOH A 141 841 148 HOH HOH . D 3 HOH A 142 842 175 HOH HOH . D 3 HOH A 143 843 214 HOH HOH . D 3 HOH A 144 844 217 HOH HOH . D 3 HOH A 145 845 48 HOH HOH . D 3 HOH A 146 846 161 HOH HOH . D 3 HOH A 147 847 80 HOH HOH . D 3 HOH A 148 848 142 HOH HOH . D 3 HOH A 149 849 248 HOH HOH . D 3 HOH A 150 850 59 HOH HOH . D 3 HOH A 151 851 26 HOH HOH . D 3 HOH A 152 852 94 HOH HOH . D 3 HOH A 153 853 60 HOH HOH . D 3 HOH A 154 854 84 HOH HOH . D 3 HOH A 155 855 207 HOH HOH . D 3 HOH A 156 856 65 HOH HOH . D 3 HOH A 157 857 168 HOH HOH . D 3 HOH A 158 858 99 HOH HOH . D 3 HOH A 159 859 51 HOH HOH . D 3 HOH A 160 860 158 HOH HOH . D 3 HOH A 161 861 38 HOH HOH . D 3 HOH A 162 862 19 HOH HOH . D 3 HOH A 163 863 15 HOH HOH . D 3 HOH A 164 864 156 HOH HOH . D 3 HOH A 165 865 79 HOH HOH . D 3 HOH A 166 866 17 HOH HOH . D 3 HOH A 167 867 171 HOH HOH . D 3 HOH A 168 868 89 HOH HOH . D 3 HOH A 169 869 23 HOH HOH . D 3 HOH A 170 870 77 HOH HOH . D 3 HOH A 171 871 144 HOH HOH . D 3 HOH A 172 872 12 HOH HOH . D 3 HOH A 173 873 76 HOH HOH . D 3 HOH A 174 874 104 HOH HOH . D 3 HOH A 175 875 253 HOH HOH . D 3 HOH A 176 876 97 HOH HOH . D 3 HOH A 177 877 20 HOH HOH . D 3 HOH A 178 878 125 HOH HOH . D 3 HOH A 179 879 49 HOH HOH . D 3 HOH A 180 880 128 HOH HOH . D 3 HOH A 181 881 134 HOH HOH . D 3 HOH A 182 882 96 HOH HOH . D 3 HOH A 183 883 172 HOH HOH . D 3 HOH A 184 884 221 HOH HOH . D 3 HOH A 185 885 258 HOH HOH . D 3 HOH A 186 886 113 HOH HOH . D 3 HOH A 187 887 138 HOH HOH . D 3 HOH A 188 888 58 HOH HOH . D 3 HOH A 189 889 179 HOH HOH . D 3 HOH A 190 890 102 HOH HOH . D 3 HOH A 191 891 261 HOH HOH . D 3 HOH A 192 892 145 HOH HOH . D 3 HOH A 193 893 260 HOH HOH . D 3 HOH A 194 894 121 HOH HOH . D 3 HOH A 195 895 266 HOH HOH . D 3 HOH A 196 896 251 HOH HOH . D 3 HOH A 197 897 192 HOH HOH . D 3 HOH A 198 898 265 HOH HOH . D 3 HOH A 199 899 268 HOH HOH . D 3 HOH A 200 900 169 HOH HOH . D 3 HOH A 201 901 270 HOH HOH . D 3 HOH A 202 902 100 HOH HOH . D 3 HOH A 203 903 114 HOH HOH . D 3 HOH A 204 904 167 HOH HOH . D 3 HOH A 205 905 143 HOH HOH . D 3 HOH A 206 906 62 HOH HOH . D 3 HOH A 207 907 242 HOH HOH . D 3 HOH A 208 908 72 HOH HOH . D 3 HOH A 209 909 110 HOH HOH . D 3 HOH A 210 910 215 HOH HOH . D 3 HOH A 211 911 42 HOH HOH . D 3 HOH A 212 912 165 HOH HOH . D 3 HOH A 213 913 131 HOH HOH . D 3 HOH A 214 914 83 HOH HOH . D 3 HOH A 215 915 246 HOH HOH . D 3 HOH A 216 916 85 HOH HOH . D 3 HOH A 217 917 211 HOH HOH . D 3 HOH A 218 918 109 HOH HOH . D 3 HOH A 219 919 47 HOH HOH . D 3 HOH A 220 920 69 HOH HOH . D 3 HOH A 221 921 233 HOH HOH . D 3 HOH A 222 922 218 HOH HOH . D 3 HOH A 223 923 74 HOH HOH . D 3 HOH A 224 924 137 HOH HOH . D 3 HOH A 225 925 238 HOH HOH . D 3 HOH A 226 926 118 HOH HOH . D 3 HOH A 227 927 257 HOH HOH . D 3 HOH A 228 928 254 HOH HOH . D 3 HOH A 229 929 219 HOH HOH . D 3 HOH A 230 930 184 HOH HOH . D 3 HOH A 231 931 196 HOH HOH . D 3 HOH A 232 932 106 HOH HOH . D 3 HOH A 233 933 153 HOH HOH . D 3 HOH A 234 934 222 HOH HOH . D 3 HOH A 235 935 135 HOH HOH . D 3 HOH A 236 936 262 HOH HOH . D 3 HOH A 237 937 220 HOH HOH . D 3 HOH A 238 938 105 HOH HOH . D 3 HOH A 239 939 92 HOH HOH . D 3 HOH A 240 940 63 HOH HOH . D 3 HOH A 241 941 160 HOH HOH . D 3 HOH A 242 942 237 HOH HOH . D 3 HOH A 243 943 181 HOH HOH . D 3 HOH A 244 944 53 HOH HOH . D 3 HOH A 245 945 159 HOH HOH . D 3 HOH A 246 946 247 HOH HOH . D 3 HOH A 247 947 202 HOH HOH . D 3 HOH A 248 948 185 HOH HOH . D 3 HOH A 249 949 269 HOH HOH . D 3 HOH A 250 950 186 HOH HOH . D 3 HOH A 251 951 190 HOH HOH . D 3 HOH A 252 952 250 HOH HOH . D 3 HOH A 253 953 95 HOH HOH . D 3 HOH A 254 954 103 HOH HOH . D 3 HOH A 255 955 140 HOH HOH . D 3 HOH A 256 956 228 HOH HOH . D 3 HOH A 257 957 199 HOH HOH . D 3 HOH A 258 958 236 HOH HOH . D 3 HOH A 259 959 197 HOH HOH . D 3 HOH A 260 960 267 HOH HOH . D 3 HOH A 261 961 212 HOH HOH . D 3 HOH A 262 962 244 HOH HOH . D 3 HOH A 263 963 178 HOH HOH . D 3 HOH A 264 964 234 HOH HOH . D 3 HOH A 265 965 232 HOH HOH . D 3 HOH A 266 966 188 HOH HOH . D 3 HOH A 267 967 209 HOH HOH . D 3 HOH A 268 968 245 HOH HOH . D 3 HOH A 269 969 208 HOH HOH . D 3 HOH A 270 970 213 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 1.225 -18.2 -0.348 1 35.92 ? C1 GOL 602 A 1 HETATM 2 O O1 GOL . . . C 2 1.96 -18.542 0.823 1 36.65 ? O1 GOL 602 A 1 HETATM 3 C C2 GOL . . . C 2 1.398 -16.737 -0.695 1 35.42 ? C2 GOL 602 A 1 HETATM 4 O O2 GOL . . . C 2 1.102 -16.556 -2.08 1 33.95 ? O2 GOL 602 A 1 HETATM 5 C C3 GOL . . . C 2 0.528 -15.84 0.156 1 37.25 ? C3 GOL 602 A 1 HETATM 6 O O3 GOL . . . C 2 0.934 -14.473 0.127 1 38.56 ? O3 GOL 602 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 421 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #