data_8I3F # _model_server_result.job_id RCO6qqg0DIY97Ui9bozKXg _model_server_result.datetime_utc '2024-10-10 01:24:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i3f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 8I3F # _exptl.entry_id 8I3F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.19 _cell.angle_gamma 90 _cell.entry_id 8I3F _cell.length_a 82.513 _cell.length_b 75.546 _cell.length_c 73.421 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I3F _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 6 B CYS 263 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.367 ? metalc ? metalc2 B SG CYS 9 B CYS 266 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.33 ? metalc ? metalc3 B SG CYS 18 B CYS 275 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc4 B SG CYS 21 B CYS 278 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc5 B ND1 HIS 26 B HIS 283 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.128 ? metalc ? metalc6 B SG CYS 29 B CYS 286 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? L ? ? ? ? ? ? ? 2.27 ? metalc ? metalc7 B SG CYS 46 B CYS 303 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc8 B SG CYS 49 B CYS 306 1_555 E ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8I3F _atom_sites.fract_transf_matrix[1][1] 0.012119 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005445 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013237 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014931 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN B 1 401 1 ZN ZN . E 4 ZN B 1 402 2 ZN ZN . F 5 HOH A 1 501 286 HOH HOH . F 5 HOH A 2 502 151 HOH HOH . F 5 HOH A 3 503 136 HOH HOH . F 5 HOH A 4 504 60 HOH HOH . F 5 HOH A 5 505 254 HOH HOH . F 5 HOH A 6 506 210 HOH HOH . F 5 HOH A 7 507 34 HOH HOH . F 5 HOH A 8 508 234 HOH HOH . F 5 HOH A 9 509 84 HOH HOH . F 5 HOH A 10 510 155 HOH HOH . F 5 HOH A 11 511 90 HOH HOH . F 5 HOH A 12 512 91 HOH HOH . F 5 HOH A 13 513 222 HOH HOH . F 5 HOH A 14 514 163 HOH HOH . F 5 HOH A 15 515 213 HOH HOH . F 5 HOH A 16 516 232 HOH HOH . F 5 HOH A 17 517 224 HOH HOH . F 5 HOH A 18 518 70 HOH HOH . F 5 HOH A 19 519 119 HOH HOH . F 5 HOH A 20 520 25 HOH HOH . F 5 HOH A 21 521 211 HOH HOH . F 5 HOH A 22 522 46 HOH HOH . F 5 HOH A 23 523 300 HOH HOH . F 5 HOH A 24 524 140 HOH HOH . F 5 HOH A 25 525 16 HOH HOH . F 5 HOH A 26 526 9 HOH HOH . F 5 HOH A 27 527 172 HOH HOH . F 5 HOH A 28 528 228 HOH HOH . F 5 HOH A 29 529 2 HOH HOH . F 5 HOH A 30 530 249 HOH HOH . F 5 HOH A 31 531 79 HOH HOH . F 5 HOH A 32 532 30 HOH HOH . F 5 HOH A 33 533 293 HOH HOH . F 5 HOH A 34 534 80 HOH HOH . F 5 HOH A 35 535 26 HOH HOH . F 5 HOH A 36 536 85 HOH HOH . F 5 HOH A 37 537 124 HOH HOH . F 5 HOH A 38 538 277 HOH HOH . F 5 HOH A 39 539 5 HOH HOH . F 5 HOH A 40 540 129 HOH HOH . F 5 HOH A 41 541 268 HOH HOH . F 5 HOH A 42 542 63 HOH HOH . F 5 HOH A 43 543 61 HOH HOH . F 5 HOH A 44 544 1 HOH HOH . F 5 HOH A 45 545 32 HOH HOH . F 5 HOH A 46 546 128 HOH HOH . F 5 HOH A 47 547 283 HOH HOH . F 5 HOH A 48 548 116 HOH HOH . F 5 HOH A 49 549 121 HOH HOH . F 5 HOH A 50 550 39 HOH HOH . F 5 HOH A 51 551 28 HOH HOH . F 5 HOH A 52 552 8 HOH HOH . F 5 HOH A 53 553 158 HOH HOH . F 5 HOH A 54 554 107 HOH HOH . F 5 HOH A 55 555 77 HOH HOH . F 5 HOH A 56 556 43 HOH HOH . F 5 HOH A 57 557 3 HOH HOH . F 5 HOH A 58 558 47 HOH HOH . F 5 HOH A 59 559 105 HOH HOH . F 5 HOH A 60 560 214 HOH HOH . F 5 HOH A 61 561 145 HOH HOH . F 5 HOH A 62 562 170 HOH HOH . F 5 HOH A 63 563 62 HOH HOH . F 5 HOH A 64 564 24 HOH HOH . F 5 HOH A 65 565 202 HOH HOH . F 5 HOH A 66 566 165 HOH HOH . F 5 HOH A 67 567 38 HOH HOH . F 5 HOH A 68 568 35 HOH HOH . F 5 HOH A 69 569 190 HOH HOH . F 5 HOH A 70 570 120 HOH HOH . F 5 HOH A 71 571 312 HOH HOH . F 5 HOH A 72 572 194 HOH HOH . F 5 HOH A 73 573 65 HOH HOH . F 5 HOH A 74 574 12 HOH HOH . F 5 HOH A 75 575 142 HOH HOH . F 5 HOH A 76 576 40 HOH HOH . F 5 HOH A 77 577 270 HOH HOH . F 5 HOH A 78 578 56 HOH HOH . F 5 HOH A 79 579 102 HOH HOH . F 5 HOH A 80 580 71 HOH HOH . F 5 HOH A 81 581 266 HOH HOH . F 5 HOH A 82 582 255 HOH HOH . F 5 HOH A 83 583 42 HOH HOH . F 5 HOH A 84 584 81 HOH HOH . F 5 HOH A 85 585 157 HOH HOH . F 5 HOH A 86 586 276 HOH HOH . F 5 HOH A 87 587 72 HOH HOH . F 5 HOH A 88 588 238 HOH HOH . F 5 HOH A 89 589 13 HOH HOH . F 5 HOH A 90 590 41 HOH HOH . F 5 HOH A 91 591 100 HOH HOH . F 5 HOH A 92 592 197 HOH HOH . F 5 HOH A 93 593 143 HOH HOH . F 5 HOH A 94 594 15 HOH HOH . F 5 HOH A 95 595 141 HOH HOH . F 5 HOH A 96 596 93 HOH HOH . F 5 HOH A 97 597 282 HOH HOH . F 5 HOH A 98 598 156 HOH HOH . F 5 HOH A 99 599 49 HOH HOH . F 5 HOH A 100 600 258 HOH HOH . F 5 HOH A 101 601 18 HOH HOH . F 5 HOH A 102 602 180 HOH HOH . F 5 HOH A 103 603 152 HOH HOH . F 5 HOH A 104 604 168 HOH HOH . F 5 HOH A 105 605 51 HOH HOH . F 5 HOH A 106 606 135 HOH HOH . F 5 HOH A 107 607 59 HOH HOH . F 5 HOH A 108 608 11 HOH HOH . F 5 HOH A 109 609 19 HOH HOH . F 5 HOH A 110 610 138 HOH HOH . F 5 HOH A 111 611 76 HOH HOH . F 5 HOH A 112 612 98 HOH HOH . F 5 HOH A 113 613 289 HOH HOH . F 5 HOH A 114 614 198 HOH HOH . F 5 HOH A 115 615 31 HOH HOH . F 5 HOH A 116 616 114 HOH HOH . F 5 HOH A 117 617 288 HOH HOH . F 5 HOH A 118 618 164 HOH HOH . F 5 HOH A 119 619 21 HOH HOH . F 5 HOH A 120 620 199 HOH HOH . F 5 HOH A 121 621 179 HOH HOH . F 5 HOH A 122 622 134 HOH HOH . F 5 HOH A 123 623 147 HOH HOH . F 5 HOH A 124 624 4 HOH HOH . F 5 HOH A 125 625 184 HOH HOH . F 5 HOH A 126 626 318 HOH HOH . F 5 HOH A 127 627 154 HOH HOH . F 5 HOH A 128 628 22 HOH HOH . F 5 HOH A 129 629 17 HOH HOH . F 5 HOH A 130 630 36 HOH HOH . F 5 HOH A 131 631 110 HOH HOH . F 5 HOH A 132 632 68 HOH HOH . F 5 HOH A 133 633 113 HOH HOH . F 5 HOH A 134 634 196 HOH HOH . F 5 HOH A 135 635 96 HOH HOH . F 5 HOH A 136 636 115 HOH HOH . F 5 HOH A 137 637 78 HOH HOH . F 5 HOH A 138 638 251 HOH HOH . F 5 HOH A 139 639 112 HOH HOH . F 5 HOH A 140 640 186 HOH HOH . F 5 HOH A 141 641 301 HOH HOH . F 5 HOH A 142 642 221 HOH HOH . F 5 HOH A 143 643 273 HOH HOH . F 5 HOH A 144 644 219 HOH HOH . F 5 HOH A 145 645 177 HOH HOH . F 5 HOH A 146 646 97 HOH HOH . F 5 HOH A 147 647 87 HOH HOH . F 5 HOH A 148 648 103 HOH HOH . F 5 HOH A 149 649 99 HOH HOH . F 5 HOH A 150 650 54 HOH HOH . F 5 HOH A 151 651 247 HOH HOH . F 5 HOH A 152 652 240 HOH HOH . F 5 HOH A 153 653 216 HOH HOH . F 5 HOH A 154 654 130 HOH HOH . F 5 HOH A 155 655 291 HOH HOH . F 5 HOH A 156 656 162 HOH HOH . F 5 HOH A 157 657 183 HOH HOH . F 5 HOH A 158 658 250 HOH HOH . F 5 HOH A 159 659 230 HOH HOH . F 5 HOH A 160 660 176 HOH HOH . F 5 HOH A 161 661 166 HOH HOH . F 5 HOH A 162 662 192 HOH HOH . F 5 HOH A 163 663 248 HOH HOH . F 5 HOH A 164 664 195 HOH HOH . F 5 HOH A 165 665 261 HOH HOH . F 5 HOH A 166 666 256 HOH HOH . F 5 HOH A 167 667 181 HOH HOH . F 5 HOH A 168 668 317 HOH HOH . F 5 HOH A 169 669 226 HOH HOH . F 5 HOH A 170 670 262 HOH HOH . F 5 HOH A 171 671 209 HOH HOH . F 5 HOH A 172 672 296 HOH HOH . F 5 HOH A 173 673 127 HOH HOH . F 5 HOH A 174 674 75 HOH HOH . F 5 HOH A 175 675 67 HOH HOH . F 5 HOH A 176 676 314 HOH HOH . F 5 HOH A 177 677 27 HOH HOH . F 5 HOH A 178 678 185 HOH HOH . F 5 HOH A 179 679 191 HOH HOH . F 5 HOH A 180 680 292 HOH HOH . F 5 HOH A 181 681 117 HOH HOH . F 5 HOH A 182 682 307 HOH HOH . F 5 HOH A 183 683 241 HOH HOH . F 5 HOH A 184 684 167 HOH HOH . F 5 HOH A 185 685 52 HOH HOH . F 5 HOH A 186 686 203 HOH HOH . F 5 HOH A 187 687 246 HOH HOH . F 5 HOH A 188 688 82 HOH HOH . F 5 HOH A 189 689 159 HOH HOH . F 5 HOH A 190 690 244 HOH HOH . F 5 HOH A 191 691 265 HOH HOH . F 5 HOH A 192 692 267 HOH HOH . F 5 HOH A 193 693 245 HOH HOH . F 5 HOH A 194 694 319 HOH HOH . F 5 HOH A 195 695 287 HOH HOH . G 5 HOH B 1 501 243 HOH HOH . G 5 HOH B 2 502 315 HOH HOH . G 5 HOH B 3 503 309 HOH HOH . G 5 HOH B 4 504 64 HOH HOH . G 5 HOH B 5 505 23 HOH HOH . G 5 HOH B 6 506 193 HOH HOH . G 5 HOH B 7 507 189 HOH HOH . G 5 HOH B 8 508 259 HOH HOH . G 5 HOH B 9 509 235 HOH HOH . G 5 HOH B 10 510 236 HOH HOH . G 5 HOH B 11 511 29 HOH HOH . G 5 HOH B 12 512 225 HOH HOH . G 5 HOH B 13 513 69 HOH HOH . G 5 HOH B 14 514 206 HOH HOH . G 5 HOH B 15 515 89 HOH HOH . G 5 HOH B 16 516 10 HOH HOH . G 5 HOH B 17 517 207 HOH HOH . G 5 HOH B 18 518 133 HOH HOH . G 5 HOH B 19 519 111 HOH HOH . G 5 HOH B 20 520 94 HOH HOH . G 5 HOH B 21 521 53 HOH HOH . G 5 HOH B 22 522 73 HOH HOH . G 5 HOH B 23 523 281 HOH HOH . G 5 HOH B 24 524 123 HOH HOH . G 5 HOH B 25 525 217 HOH HOH . G 5 HOH B 26 526 153 HOH HOH . G 5 HOH B 27 527 125 HOH HOH . G 5 HOH B 28 528 122 HOH HOH . G 5 HOH B 29 529 233 HOH HOH . G 5 HOH B 30 530 7 HOH HOH . G 5 HOH B 31 531 175 HOH HOH . G 5 HOH B 32 532 83 HOH HOH . G 5 HOH B 33 533 33 HOH HOH . G 5 HOH B 34 534 14 HOH HOH . G 5 HOH B 35 535 137 HOH HOH . G 5 HOH B 36 536 188 HOH HOH . G 5 HOH B 37 537 187 HOH HOH . G 5 HOH B 38 538 126 HOH HOH . G 5 HOH B 39 539 50 HOH HOH . G 5 HOH B 40 540 303 HOH HOH . G 5 HOH B 41 541 92 HOH HOH . G 5 HOH B 42 542 109 HOH HOH . G 5 HOH B 43 543 160 HOH HOH . G 5 HOH B 44 544 274 HOH HOH . G 5 HOH B 45 545 20 HOH HOH . G 5 HOH B 46 546 148 HOH HOH . G 5 HOH B 47 547 297 HOH HOH . G 5 HOH B 48 548 37 HOH HOH . G 5 HOH B 49 549 131 HOH HOH . G 5 HOH B 50 550 171 HOH HOH . G 5 HOH B 51 551 132 HOH HOH . G 5 HOH B 52 552 86 HOH HOH . G 5 HOH B 53 553 275 HOH HOH . G 5 HOH B 54 554 108 HOH HOH . G 5 HOH B 55 555 269 HOH HOH . G 5 HOH B 56 556 55 HOH HOH . G 5 HOH B 57 557 45 HOH HOH . G 5 HOH B 58 558 182 HOH HOH . G 5 HOH B 59 559 212 HOH HOH . G 5 HOH B 60 560 66 HOH HOH . G 5 HOH B 61 561 310 HOH HOH . G 5 HOH B 62 562 280 HOH HOH . G 5 HOH B 63 563 118 HOH HOH . G 5 HOH B 64 564 174 HOH HOH . G 5 HOH B 65 565 316 HOH HOH . G 5 HOH B 66 566 88 HOH HOH . G 5 HOH B 67 567 295 HOH HOH . G 5 HOH B 68 568 48 HOH HOH . G 5 HOH B 69 569 106 HOH HOH . G 5 HOH B 70 570 101 HOH HOH . G 5 HOH B 71 571 44 HOH HOH . G 5 HOH B 72 572 146 HOH HOH . G 5 HOH B 73 573 231 HOH HOH . G 5 HOH B 74 574 144 HOH HOH . G 5 HOH B 75 575 58 HOH HOH . G 5 HOH B 76 576 260 HOH HOH . G 5 HOH B 77 577 284 HOH HOH . G 5 HOH B 78 578 149 HOH HOH . G 5 HOH B 79 579 95 HOH HOH . G 5 HOH B 80 580 6 HOH HOH . G 5 HOH B 81 581 257 HOH HOH . G 5 HOH B 82 582 139 HOH HOH . G 5 HOH B 83 583 305 HOH HOH . G 5 HOH B 84 584 74 HOH HOH . G 5 HOH B 85 585 320 HOH HOH . G 5 HOH B 86 586 169 HOH HOH . G 5 HOH B 87 587 161 HOH HOH . G 5 HOH B 88 588 279 HOH HOH . G 5 HOH B 89 589 218 HOH HOH . G 5 HOH B 90 590 173 HOH HOH . G 5 HOH B 91 591 306 HOH HOH . G 5 HOH B 92 592 290 HOH HOH . G 5 HOH B 93 593 302 HOH HOH . G 5 HOH B 94 594 253 HOH HOH . G 5 HOH B 95 595 223 HOH HOH . G 5 HOH B 96 596 272 HOH HOH . G 5 HOH B 97 597 178 HOH HOH . G 5 HOH B 98 598 150 HOH HOH . H 5 HOH C 1 101 215 HOH HOH . H 5 HOH C 2 102 311 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id L _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 5.421 _atom_site.Cartn_y 43.428 _atom_site.Cartn_z 22.219 _atom_site.occupancy 0.99 _atom_site.B_iso_or_equiv 24.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #