data_8I49
#
_model_server_result.job_id            V_BN3DMTo4_3LN8F95HtqQ 
_model_server_result.datetime_utc      '2025-07-18 07:56:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8i49 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":1101}' 
#
_entry.id    8I49 
#
_exptl.entry_id    8I49 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8I49 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8I49 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     8I49 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 ATP A 1 1101 1101 ATP ATP . 
H 2 ATP D 1 1101 1101 ATP ATP . 
I 2 ATP E 1 1101 1101 ATP ATP . 
J 2 ATP F 1 1101 1101 ATP ATP . 
K 2 ATP C 1 1101 1101 ATP ATP . 
L 2 ATP B 1 1101 1101 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . K 2 116.85 154.39 154.856 1 79.46 ? PG ATP 1101 C 1 
HETATM 2 O O1G ATP . . . K 2 116.426 153.863 153.562 1 63.08 ? O1G ATP 1101 C 1 
HETATM 3 O O2G ATP . . . K 2 115.662 154.304 155.695 1 63.38 ? O2G ATP 1101 C 1 
HETATM 4 O O3G ATP . . . K 2 117.743 153.364 155.391 1 61.37 ? O3G ATP 1101 C 1 
HETATM 5 P PB ATP . . . K 2 118.095 156.756 156.066 1 73.81 ? PB ATP 1101 C 1 
HETATM 6 O O1B ATP . . . K 2 118.651 155.875 157.101 1 58.08 ? O1B ATP 1101 C 1 
HETATM 7 O O2B ATP . . . K 2 116.994 157.399 156.784 1 59.88 ? O2B ATP 1101 C 1 
HETATM 8 O O3B ATP . . . K 2 117.536 155.897 154.774 1 58.35 ? O3B ATP 1101 C 1 
HETATM 9 P PA ATP . . . K 2 119.389 159.4 156.146 1 70.67 ? PA ATP 1101 C 1 
HETATM 10 O O1A ATP . . . K 2 118.274 159.784 156.984 1 55.53 ? O1A ATP 1101 C 1 
HETATM 11 O O2A ATP . . . K 2 120.473 159.48 157.106 1 56.83 ? O2A ATP 1101 C 1 
HETATM 12 O O3A ATP . . . K 2 119.226 157.864 155.555 1 64.22 ? O3A ATP 1101 C 1 
HETATM 13 O O5' ATP . . . K 2 119.603 160.459 154.88 1 61.69 ? O5' ATP 1101 C 1 
HETATM 14 C C5' ATP . . . K 2 118.572 161.402 154.554 1 56.81 ? C5' ATP 1101 C 1 
HETATM 15 C C4' ATP . . . K 2 117.913 161.015 153.268 1 55.5 ? C4' ATP 1101 C 1 
HETATM 16 O O4' ATP . . . K 2 116.446 161.274 153.385 1 58.5 ? O4' ATP 1101 C 1 
HETATM 17 C C3' ATP . . . K 2 118.398 161.845 152.141 1 57.01 ? C3' ATP 1101 C 1 
HETATM 18 O O3' ATP . . . K 2 119.58 161.268 151.512 1 59.18 ? O3' ATP 1101 C 1 
HETATM 19 C C2' ATP . . . K 2 117.284 161.864 151.234 1 59.41 ? C2' ATP 1101 C 1 
HETATM 20 O O2' ATP . . . K 2 117.2 160.593 150.497 1 58.72 ? O2' ATP 1101 C 1 
HETATM 21 C C1' ATP . . . K 2 116.094 161.964 152.089 1 58.75 ? C1' ATP 1101 C 1 
HETATM 22 N N9 ATP . . . K 2 115.741 163.324 152.326 1 56.84 ? N9 ATP 1101 C 1 
HETATM 23 C C8 ATP . . . K 2 116.152 164.03 153.391 1 55.62 ? C8 ATP 1101 C 1 
HETATM 24 N N7 ATP . . . K 2 115.594 165.228 153.224 1 55.29 ? N7 ATP 1101 C 1 
HETATM 25 C C5 ATP . . . K 2 114.8 165.402 152.081 1 56.82 ? C5 ATP 1101 C 1 
HETATM 26 C C6 ATP . . . K 2 114.012 166.304 151.357 1 54.51 ? C6 ATP 1101 C 1 
HETATM 27 N N6 ATP . . . K 2 113.793 167.675 151.826 1 55.55 ? N6 ATP 1101 C 1 
HETATM 28 N N1 ATP . . . K 2 113.485 165.889 150.271 1 54.43 ? N1 ATP 1101 C 1 
HETATM 29 C C2 ATP . . . K 2 113.602 164.704 149.762 1 54.89 ? C2 ATP 1101 C 1 
HETATM 30 N N3 ATP . . . K 2 114.309 163.671 150.271 1 54.7 ? N3 ATP 1101 C 1 
HETATM 31 C C4 ATP . . . K 2 114.902 164.071 151.45 1 54.25 ? C4 ATP 1101 C 1 
HETATM 32 H "H5'1" ATP . . . K 2 117.914 161.432 155.267 1 56.81 ? "H5'1" ATP 1101 C 1 
HETATM 33 H "H5'2" ATP . . . K 2 118.95 162.293 154.479 1 56.81 ? "H5'2" ATP 1101 C 1 
HETATM 34 H H4' ATP . . . K 2 118.115 160.081 153.101 1 55.5 ? H4' ATP 1101 C 1 
HETATM 35 H H3' ATP . . . K 2 118.671 162.731 152.425 1 57.01 ? H3' ATP 1101 C 1 
HETATM 36 H HO3' ATP . . . K 2 119.828 161.76 150.878 1 57.01 ? HO3' ATP 1101 C 1 
HETATM 37 H H2' ATP . . . K 2 117.368 162.588 150.595 1 59.41 ? H2' ATP 1101 C 1 
HETATM 38 H HO2' ATP . . . K 2 116.547 160.616 149.97 1 59.41 ? HO2' ATP 1101 C 1 
HETATM 39 H H1' ATP . . . K 2 115.327 161.551 151.66 1 58.75 ? H1' ATP 1101 C 1 
HETATM 40 H H8 ATP . . . K 2 116.791 163.702 154.199 1 55.62 ? H8 ATP 1101 C 1 
HETATM 41 H HN61 ATP . . . K 2 114.215 167.989 152.686 1 55.55 ? HN61 ATP 1101 C 1 
HETATM 42 H HN62 ATP . . . K 2 113.219 168.308 151.284 1 55.55 ? HN62 ATP 1101 C 1 
HETATM 43 H H2 ATP . . . K 2 113.079 164.521 148.833 1 54.89 ? H2 ATP 1101 C 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    53 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           43 
#