data_8I4I # _model_server_result.job_id DAcwLt7LrC-5CZrnMQqpqA _model_server_result.datetime_utc '2024-11-18 14:39:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i4i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 8I4I # _exptl.entry_id 8I4I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.2 _cell.angle_gamma 90 _cell.entry_id 8I4I _cell.length_a 61.664 _cell.length_b 80.048 _cell.length_c 77.435 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I4I _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 310 n n N H TRP sing 311 n n N H2 TRP sing 312 n n CA C TRP sing 313 n n CA CB TRP sing 314 n n CA HA TRP sing 315 n n C O TRP doub 316 n n C OXT TRP sing 317 n n CB CG TRP sing 318 n n CB HB2 TRP sing 319 n n CB HB3 TRP sing 320 n n CG CD1 TRP doub 321 n y CG CD2 TRP sing 322 n y CD1 NE1 TRP sing 323 n y CD1 HD1 TRP sing 324 n n CD2 CE2 TRP doub 325 n y CD2 CE3 TRP sing 326 n y NE1 CE2 TRP sing 327 n y NE1 HE1 TRP sing 328 n n CE2 CZ2 TRP sing 329 n y CE3 CZ3 TRP doub 330 n y CE3 HE3 TRP sing 331 n n CZ2 CH2 TRP doub 332 n y CZ2 HZ2 TRP sing 333 n n CZ3 CH2 TRP sing 334 n y CZ3 HZ3 TRP sing 335 n n CH2 HH2 TRP sing 336 n n OXT HXT TRP sing 337 n n # _atom_sites.entry_id 8I4I _atom_sites.fract_transf_matrix[1][1] 0.016217 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00471 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013448 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRP A 1 401 1 TRP W . D 3 SO4 A 1 402 2 SO4 SO4 . E 4 TYM B 1 401 401 TYM TYM . F 3 SO4 B 1 402 1 SO4 SO4 . G 5 HOH A 1 501 170 HOH HOH . G 5 HOH A 2 502 192 HOH HOH . G 5 HOH A 3 503 5 HOH HOH . G 5 HOH A 4 504 9 HOH HOH . G 5 HOH A 5 505 38 HOH HOH . G 5 HOH A 6 506 212 HOH HOH . G 5 HOH A 7 507 121 HOH HOH . G 5 HOH A 8 508 128 HOH HOH . G 5 HOH A 9 509 123 HOH HOH . G 5 HOH A 10 510 76 HOH HOH . G 5 HOH A 11 511 144 HOH HOH . G 5 HOH A 12 512 109 HOH HOH . G 5 HOH A 13 513 154 HOH HOH . G 5 HOH A 14 514 177 HOH HOH . G 5 HOH A 15 515 99 HOH HOH . G 5 HOH A 16 516 172 HOH HOH . G 5 HOH A 17 517 8 HOH HOH . G 5 HOH A 18 518 151 HOH HOH . G 5 HOH A 19 519 202 HOH HOH . G 5 HOH A 20 520 11 HOH HOH . G 5 HOH A 21 521 17 HOH HOH . G 5 HOH A 22 522 29 HOH HOH . G 5 HOH A 23 523 27 HOH HOH . G 5 HOH A 24 524 6 HOH HOH . G 5 HOH A 25 525 149 HOH HOH . G 5 HOH A 26 526 187 HOH HOH . G 5 HOH A 27 527 35 HOH HOH . G 5 HOH A 28 528 40 HOH HOH . G 5 HOH A 29 529 88 HOH HOH . G 5 HOH A 30 530 209 HOH HOH . G 5 HOH A 31 531 210 HOH HOH . G 5 HOH A 32 532 32 HOH HOH . G 5 HOH A 33 533 171 HOH HOH . G 5 HOH A 34 534 21 HOH HOH . G 5 HOH A 35 535 112 HOH HOH . G 5 HOH A 36 536 163 HOH HOH . G 5 HOH A 37 537 242 HOH HOH . G 5 HOH A 38 538 103 HOH HOH . G 5 HOH A 39 539 100 HOH HOH . G 5 HOH A 40 540 94 HOH HOH . G 5 HOH A 41 541 164 HOH HOH . G 5 HOH A 42 542 214 HOH HOH . G 5 HOH A 43 543 173 HOH HOH . G 5 HOH A 44 544 201 HOH HOH . G 5 HOH A 45 545 55 HOH HOH . G 5 HOH A 46 546 174 HOH HOH . G 5 HOH A 47 547 126 HOH HOH . G 5 HOH A 48 548 19 HOH HOH . G 5 HOH A 49 549 111 HOH HOH . G 5 HOH A 50 550 207 HOH HOH . G 5 HOH A 51 551 92 HOH HOH . G 5 HOH A 52 552 69 HOH HOH . G 5 HOH A 53 553 116 HOH HOH . G 5 HOH A 54 554 57 HOH HOH . G 5 HOH A 55 555 74 HOH HOH . G 5 HOH A 56 556 216 HOH HOH . G 5 HOH A 57 557 96 HOH HOH . G 5 HOH A 58 558 165 HOH HOH . G 5 HOH A 59 559 66 HOH HOH . G 5 HOH A 60 560 83 HOH HOH . G 5 HOH A 61 561 24 HOH HOH . G 5 HOH A 62 562 125 HOH HOH . G 5 HOH A 63 563 118 HOH HOH . G 5 HOH A 64 564 4 HOH HOH . G 5 HOH A 65 565 52 HOH HOH . G 5 HOH A 66 566 93 HOH HOH . G 5 HOH A 67 567 175 HOH HOH . G 5 HOH A 68 568 85 HOH HOH . G 5 HOH A 69 569 215 HOH HOH . G 5 HOH A 70 570 129 HOH HOH . G 5 HOH A 71 571 75 HOH HOH . G 5 HOH A 72 572 211 HOH HOH . G 5 HOH A 73 573 203 HOH HOH . G 5 HOH A 74 574 45 HOH HOH . G 5 HOH A 75 575 102 HOH HOH . G 5 HOH A 76 576 130 HOH HOH . G 5 HOH A 77 577 195 HOH HOH . G 5 HOH A 78 578 180 HOH HOH . G 5 HOH A 79 579 185 HOH HOH . G 5 HOH A 80 580 1 HOH HOH . G 5 HOH A 81 581 71 HOH HOH . G 5 HOH A 82 582 54 HOH HOH . G 5 HOH A 83 583 117 HOH HOH . G 5 HOH A 84 584 183 HOH HOH . G 5 HOH A 85 585 233 HOH HOH . G 5 HOH A 86 586 169 HOH HOH . G 5 HOH A 87 587 205 HOH HOH . G 5 HOH A 88 588 208 HOH HOH . G 5 HOH A 89 589 155 HOH HOH . G 5 HOH A 90 590 73 HOH HOH . G 5 HOH A 91 591 204 HOH HOH . G 5 HOH A 92 592 194 HOH HOH . G 5 HOH A 93 593 146 HOH HOH . G 5 HOH A 94 594 182 HOH HOH . G 5 HOH A 95 595 30 HOH HOH . G 5 HOH A 96 596 178 HOH HOH . G 5 HOH A 97 597 166 HOH HOH . G 5 HOH A 98 598 147 HOH HOH . G 5 HOH A 99 599 68 HOH HOH . G 5 HOH A 100 600 72 HOH HOH . G 5 HOH A 101 601 213 HOH HOH . G 5 HOH A 102 602 206 HOH HOH . G 5 HOH A 103 603 139 HOH HOH . G 5 HOH A 104 604 95 HOH HOH . G 5 HOH A 105 605 241 HOH HOH . G 5 HOH A 106 606 230 HOH HOH . G 5 HOH A 107 607 131 HOH HOH . G 5 HOH A 108 608 61 HOH HOH . G 5 HOH A 109 609 240 HOH HOH . G 5 HOH A 110 610 157 HOH HOH . G 5 HOH A 111 611 167 HOH HOH . H 5 HOH B 1 501 200 HOH HOH . H 5 HOH B 2 502 101 HOH HOH . H 5 HOH B 3 503 63 HOH HOH . H 5 HOH B 4 504 90 HOH HOH . H 5 HOH B 5 505 198 HOH HOH . H 5 HOH B 6 506 142 HOH HOH . H 5 HOH B 7 507 36 HOH HOH . H 5 HOH B 8 508 89 HOH HOH . H 5 HOH B 9 509 79 HOH HOH . H 5 HOH B 10 510 238 HOH HOH . H 5 HOH B 11 511 77 HOH HOH . H 5 HOH B 12 512 98 HOH HOH . H 5 HOH B 13 513 237 HOH HOH . H 5 HOH B 14 514 228 HOH HOH . H 5 HOH B 15 515 12 HOH HOH . H 5 HOH B 16 516 49 HOH HOH . H 5 HOH B 17 517 34 HOH HOH . H 5 HOH B 18 518 197 HOH HOH . H 5 HOH B 19 519 219 HOH HOH . H 5 HOH B 20 520 227 HOH HOH . H 5 HOH B 21 521 53 HOH HOH . H 5 HOH B 22 522 186 HOH HOH . H 5 HOH B 23 523 135 HOH HOH . H 5 HOH B 24 524 33 HOH HOH . H 5 HOH B 25 525 65 HOH HOH . H 5 HOH B 26 526 234 HOH HOH . H 5 HOH B 27 527 97 HOH HOH . H 5 HOH B 28 528 59 HOH HOH . H 5 HOH B 29 529 218 HOH HOH . H 5 HOH B 30 530 235 HOH HOH . H 5 HOH B 31 531 50 HOH HOH . H 5 HOH B 32 532 56 HOH HOH . H 5 HOH B 33 533 133 HOH HOH . H 5 HOH B 34 534 220 HOH HOH . H 5 HOH B 35 535 232 HOH HOH . H 5 HOH B 36 536 127 HOH HOH . H 5 HOH B 37 537 119 HOH HOH . H 5 HOH B 38 538 156 HOH HOH . H 5 HOH B 39 539 20 HOH HOH . H 5 HOH B 40 540 84 HOH HOH . H 5 HOH B 41 541 239 HOH HOH . H 5 HOH B 42 542 60 HOH HOH . H 5 HOH B 43 543 217 HOH HOH . H 5 HOH B 44 544 67 HOH HOH . H 5 HOH B 45 545 25 HOH HOH . H 5 HOH B 46 546 46 HOH HOH . H 5 HOH B 47 547 104 HOH HOH . H 5 HOH B 48 548 23 HOH HOH . H 5 HOH B 49 549 148 HOH HOH . H 5 HOH B 50 550 138 HOH HOH . H 5 HOH B 51 551 2 HOH HOH . H 5 HOH B 52 552 14 HOH HOH . H 5 HOH B 53 553 140 HOH HOH . H 5 HOH B 54 554 137 HOH HOH . H 5 HOH B 55 555 10 HOH HOH . H 5 HOH B 56 556 47 HOH HOH . H 5 HOH B 57 557 42 HOH HOH . H 5 HOH B 58 558 196 HOH HOH . H 5 HOH B 59 559 3 HOH HOH . H 5 HOH B 60 560 114 HOH HOH . H 5 HOH B 61 561 246 HOH HOH . H 5 HOH B 62 562 18 HOH HOH . H 5 HOH B 63 563 190 HOH HOH . H 5 HOH B 64 564 225 HOH HOH . H 5 HOH B 65 565 28 HOH HOH . H 5 HOH B 66 566 16 HOH HOH . H 5 HOH B 67 567 7 HOH HOH . H 5 HOH B 68 568 107 HOH HOH . H 5 HOH B 69 569 224 HOH HOH . H 5 HOH B 70 570 31 HOH HOH . H 5 HOH B 71 571 58 HOH HOH . H 5 HOH B 72 572 43 HOH HOH . H 5 HOH B 73 573 150 HOH HOH . H 5 HOH B 74 574 78 HOH HOH . H 5 HOH B 75 575 244 HOH HOH . H 5 HOH B 76 576 82 HOH HOH . H 5 HOH B 77 577 145 HOH HOH . H 5 HOH B 78 578 106 HOH HOH . H 5 HOH B 79 579 48 HOH HOH . H 5 HOH B 80 580 176 HOH HOH . H 5 HOH B 81 581 26 HOH HOH . H 5 HOH B 82 582 44 HOH HOH . H 5 HOH B 83 583 221 HOH HOH . H 5 HOH B 84 584 81 HOH HOH . H 5 HOH B 85 585 13 HOH HOH . H 5 HOH B 86 586 80 HOH HOH . H 5 HOH B 87 587 22 HOH HOH . H 5 HOH B 88 588 162 HOH HOH . H 5 HOH B 89 589 115 HOH HOH . H 5 HOH B 90 590 184 HOH HOH . H 5 HOH B 91 591 39 HOH HOH . H 5 HOH B 92 592 41 HOH HOH . H 5 HOH B 93 593 105 HOH HOH . H 5 HOH B 94 594 108 HOH HOH . H 5 HOH B 95 595 91 HOH HOH . H 5 HOH B 96 596 86 HOH HOH . H 5 HOH B 97 597 64 HOH HOH . H 5 HOH B 98 598 136 HOH HOH . H 5 HOH B 99 599 199 HOH HOH . H 5 HOH B 100 600 159 HOH HOH . H 5 HOH B 101 601 189 HOH HOH . H 5 HOH B 102 602 143 HOH HOH . H 5 HOH B 103 603 134 HOH HOH . H 5 HOH B 104 604 161 HOH HOH . H 5 HOH B 105 605 191 HOH HOH . H 5 HOH B 106 606 51 HOH HOH . H 5 HOH B 107 607 110 HOH HOH . H 5 HOH B 108 608 141 HOH HOH . H 5 HOH B 109 609 153 HOH HOH . H 5 HOH B 110 610 226 HOH HOH . H 5 HOH B 111 611 132 HOH HOH . H 5 HOH B 112 612 158 HOH HOH . H 5 HOH B 113 613 87 HOH HOH . H 5 HOH B 114 614 113 HOH HOH . H 5 HOH B 115 615 15 HOH HOH . H 5 HOH B 116 616 160 HOH HOH . H 5 HOH B 117 617 122 HOH HOH . H 5 HOH B 118 618 236 HOH HOH . H 5 HOH B 119 619 223 HOH HOH . H 5 HOH B 120 620 152 HOH HOH . H 5 HOH B 121 621 124 HOH HOH . H 5 HOH B 122 622 222 HOH HOH . H 5 HOH B 123 623 179 HOH HOH . H 5 HOH B 124 624 37 HOH HOH . H 5 HOH B 125 625 229 HOH HOH . H 5 HOH B 126 626 243 HOH HOH . H 5 HOH B 127 627 62 HOH HOH . H 5 HOH B 128 628 120 HOH HOH . H 5 HOH B 129 629 168 HOH HOH . H 5 HOH B 130 630 245 HOH HOH . H 5 HOH B 131 631 70 HOH HOH . H 5 HOH B 132 632 231 HOH HOH . H 5 HOH B 133 633 181 HOH HOH . H 5 HOH B 134 634 193 HOH HOH . H 5 HOH B 135 635 188 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . C 2 22.463 2.837 1.25 1 32.87 ? N TRP 401 A 1 HETATM 2 C CA TRP . . . C 2 23.386 2.101 0.363 1 32.85 ? CA TRP 401 A 1 HETATM 3 C C TRP . . . C 2 23.565 2.814 -0.973 1 33.38 ? C TRP 401 A 1 HETATM 4 O O TRP . . . C 2 24.515 2.605 -1.697 1 33.59 ? O TRP 401 A 1 HETATM 5 C CB TRP . . . C 2 22.878 0.667 0.131 1 32.42 ? CB TRP 401 A 1 HETATM 6 C CG TRP . . . C 2 22.758 -0.111 1.407 1 31.91 ? CG TRP 401 A 1 HETATM 7 C CD1 TRP . . . C 2 21.609 -0.46 2.055 1 31.69 ? CD1 TRP 401 A 1 HETATM 8 C CD2 TRP . . . C 2 23.84 -0.548 2.244 1 31.69 ? CD2 TRP 401 A 1 HETATM 9 N NE1 TRP . . . C 2 21.903 -1.075 3.242 1 31.41 ? NE1 TRP 401 A 1 HETATM 10 C CE2 TRP . . . C 2 23.265 -1.14 3.386 1 31.55 ? CE2 TRP 401 A 1 HETATM 11 C CE3 TRP . . . C 2 25.229 -0.481 2.154 1 31.51 ? CE3 TRP 401 A 1 HETATM 12 C CZ2 TRP . . . C 2 24.045 -1.644 4.422 1 31.35 ? CZ2 TRP 401 A 1 HETATM 13 C CZ3 TRP . . . C 2 26.012 -0.982 3.186 1 31.35 ? CZ3 TRP 401 A 1 HETATM 14 C CH2 TRP . . . C 2 25.425 -1.555 4.31 1 31.35 ? CH2 TRP 401 A 1 HETATM 15 O OXT TRP . . . C 2 22.606 3.664 -1.25 1 34.17 ? OXT TRP 401 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #