data_8I51 # _model_server_result.job_id aAyfY76WTXGs9tGz1KNVIg _model_server_result.datetime_utc '2024-12-01 04:13:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i51 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":601}' # _entry.id 8I51 # _exptl.entry_id 8I51 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8I51 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I51 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 J N N ? 2 M N N ? 2 P N N ? 2 S N N ? 2 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 H O3P AMP . A AMP 602 1_555 I CBC OP3 . A OP3 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.631 ? covale ? covale2 K O1P AMP . B AMP 602 1_555 L CBC OP3 . B OP3 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.631 ? covale ? covale3 N O3P AMP . C AMP 602 1_555 O CBC OP3 . C OP3 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.631 ? covale ? covale4 Q O1P AMP . D AMP 602 1_555 R CBC OP3 . D OP3 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.63 ? covale ? covale5 T O3P AMP . E AMP 602 1_555 U CBC OP3 . E OP3 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.631 ? covale ? covale6 W O1P AMP . F AMP 602 1_555 X CBC OP3 . F OP3 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.632 ? metalc ? metalc1 A OE1 GLU 322 A GLU 322 1_555 G MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc2 G MG MG . A MG 601 1_555 H O1P AMP . A AMP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc3 B OE1 GLU 322 B GLU 322 1_555 J MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc4 J MG MG . B MG 601 1_555 K O3P AMP . B AMP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc5 C OE1 GLU 322 C GLU 322 1_555 M MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc6 M MG MG . C MG 601 1_555 N O1P AMP . C AMP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc7 D OE1 GLU 322 D GLU 322 1_555 P MG MG . D MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc8 P MG MG . D MG 601 1_555 Q O3P AMP . D AMP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc9 E OE1 GLU 322 E GLU 322 1_555 S MG MG . E MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc10 S MG MG . E MG 601 1_555 T O1P AMP . E AMP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc11 F OE1 GLU 322 F GLU 322 1_555 V MG MG . F MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc12 V MG MG . F MG 601 1_555 W O3P AMP . F AMP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8I51 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 MG A 1 601 1103 MG MG . H 3 AMP A 1 602 2002 AMP AMP . I 4 OP3 A 1 603 2001 OP3 MC7 . J 2 MG B 1 601 1103 MG MG . K 3 AMP B 1 602 2002 AMP AMP . L 4 OP3 B 1 603 2001 OP3 MC7 . M 2 MG C 1 601 1103 MG MG . N 3 AMP C 1 602 2002 AMP AMP . O 4 OP3 C 1 603 2001 OP3 MC7 . P 2 MG D 1 601 1103 MG MG . Q 3 AMP D 1 602 2002 AMP AMP . R 4 OP3 D 1 603 2001 OP3 MC7 . S 2 MG E 1 601 1103 MG MG . T 3 AMP E 1 602 2002 AMP AMP . U 4 OP3 E 1 603 2001 OP3 MC7 . V 2 MG F 1 601 1103 MG MG . W 3 AMP F 1 602 2002 AMP AMP . X 4 OP3 F 1 603 2001 OP3 MC7 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id S _atom_site.label_entity_id 2 _atom_site.Cartn_x 202.36 _atom_site.Cartn_y 165.488 _atom_site.Cartn_z 154.116 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 51.94 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id E _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 429 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #