data_8I63 # _model_server_result.job_id '_QcES_GtwmTbx6cxarAyrg' _model_server_result.datetime_utc '2024-11-08 06:12:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8I63 # _exptl.entry_id 8I63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8I63 _cell.length_a 46.38 _cell.length_b 59.7 _cell.length_c 73.65 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 96 n n C1 C2 EDO sing 97 n n C1 H11 EDO sing 98 n n C1 H12 EDO sing 99 n n O1 HO1 EDO sing 100 n n C2 O2 EDO sing 101 n n C2 H21 EDO sing 102 n n C2 H22 EDO sing 103 n n O2 HO2 EDO sing 104 n n # _atom_sites.entry_id 8I63 _atom_sites.fract_transf_matrix[1][1] 0.021561 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01675 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013578 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BR8 A 1 301 301 BR8 BR8 . C 3 EDO A 1 302 401 EDO EDO . D 3 EDO A 1 303 501 EDO EDO . E 4 HOH A 1 401 79 HOH HOH . E 4 HOH A 2 402 110 HOH HOH . E 4 HOH A 3 403 82 HOH HOH . E 4 HOH A 4 404 97 HOH HOH . E 4 HOH A 5 405 89 HOH HOH . E 4 HOH A 6 406 37 HOH HOH . E 4 HOH A 7 407 23 HOH HOH . E 4 HOH A 8 408 58 HOH HOH . E 4 HOH A 9 409 71 HOH HOH . E 4 HOH A 10 410 81 HOH HOH . E 4 HOH A 11 411 10 HOH HOH . E 4 HOH A 12 412 72 HOH HOH . E 4 HOH A 13 413 108 HOH HOH . E 4 HOH A 14 414 102 HOH HOH . E 4 HOH A 15 415 94 HOH HOH . E 4 HOH A 16 416 48 HOH HOH . E 4 HOH A 17 417 4 HOH HOH . E 4 HOH A 18 418 107 HOH HOH . E 4 HOH A 19 419 5 HOH HOH . E 4 HOH A 20 420 129 HOH HOH . E 4 HOH A 21 421 1 HOH HOH . E 4 HOH A 22 422 98 HOH HOH . E 4 HOH A 23 423 101 HOH HOH . E 4 HOH A 24 424 39 HOH HOH . E 4 HOH A 25 425 114 HOH HOH . E 4 HOH A 26 426 74 HOH HOH . E 4 HOH A 27 427 11 HOH HOH . E 4 HOH A 28 428 12 HOH HOH . E 4 HOH A 29 429 121 HOH HOH . E 4 HOH A 30 430 59 HOH HOH . E 4 HOH A 31 431 42 HOH HOH . E 4 HOH A 32 432 66 HOH HOH . E 4 HOH A 33 433 83 HOH HOH . E 4 HOH A 34 434 127 HOH HOH . E 4 HOH A 35 435 78 HOH HOH . E 4 HOH A 36 436 49 HOH HOH . E 4 HOH A 37 437 109 HOH HOH . E 4 HOH A 38 438 22 HOH HOH . E 4 HOH A 39 439 69 HOH HOH . E 4 HOH A 40 440 41 HOH HOH . E 4 HOH A 41 441 15 HOH HOH . E 4 HOH A 42 442 68 HOH HOH . E 4 HOH A 43 443 24 HOH HOH . E 4 HOH A 44 444 47 HOH HOH . E 4 HOH A 45 445 92 HOH HOH . E 4 HOH A 46 446 120 HOH HOH . E 4 HOH A 47 447 80 HOH HOH . E 4 HOH A 48 448 70 HOH HOH . E 4 HOH A 49 449 113 HOH HOH . E 4 HOH A 50 450 62 HOH HOH . E 4 HOH A 51 451 14 HOH HOH . E 4 HOH A 52 452 6 HOH HOH . E 4 HOH A 53 453 52 HOH HOH . E 4 HOH A 54 454 46 HOH HOH . E 4 HOH A 55 455 38 HOH HOH . E 4 HOH A 56 456 35 HOH HOH . E 4 HOH A 57 457 111 HOH HOH . E 4 HOH A 58 458 2 HOH HOH . E 4 HOH A 59 459 44 HOH HOH . E 4 HOH A 60 460 91 HOH HOH . E 4 HOH A 61 461 100 HOH HOH . E 4 HOH A 62 462 51 HOH HOH . E 4 HOH A 63 463 128 HOH HOH . E 4 HOH A 64 464 28 HOH HOH . E 4 HOH A 65 465 9 HOH HOH . E 4 HOH A 66 466 53 HOH HOH . E 4 HOH A 67 467 56 HOH HOH . E 4 HOH A 68 468 67 HOH HOH . E 4 HOH A 69 469 117 HOH HOH . E 4 HOH A 70 470 90 HOH HOH . E 4 HOH A 71 471 115 HOH HOH . E 4 HOH A 72 472 57 HOH HOH . E 4 HOH A 73 473 131 HOH HOH . E 4 HOH A 74 474 17 HOH HOH . E 4 HOH A 75 475 34 HOH HOH . E 4 HOH A 76 476 40 HOH HOH . E 4 HOH A 77 477 19 HOH HOH . E 4 HOH A 78 478 3 HOH HOH . E 4 HOH A 79 479 93 HOH HOH . E 4 HOH A 80 480 116 HOH HOH . E 4 HOH A 81 481 13 HOH HOH . E 4 HOH A 82 482 86 HOH HOH . E 4 HOH A 83 483 55 HOH HOH . E 4 HOH A 84 484 8 HOH HOH . E 4 HOH A 85 485 123 HOH HOH . E 4 HOH A 86 486 64 HOH HOH . E 4 HOH A 87 487 31 HOH HOH . E 4 HOH A 88 488 27 HOH HOH . E 4 HOH A 89 489 18 HOH HOH . E 4 HOH A 90 490 33 HOH HOH . E 4 HOH A 91 491 20 HOH HOH . E 4 HOH A 92 492 76 HOH HOH . E 4 HOH A 93 493 54 HOH HOH . E 4 HOH A 94 494 7 HOH HOH . E 4 HOH A 95 495 130 HOH HOH . E 4 HOH A 96 496 21 HOH HOH . E 4 HOH A 97 497 36 HOH HOH . E 4 HOH A 98 498 73 HOH HOH . E 4 HOH A 99 499 16 HOH HOH . E 4 HOH A 100 500 30 HOH HOH . E 4 HOH A 101 501 26 HOH HOH . E 4 HOH A 102 502 63 HOH HOH . E 4 HOH A 103 503 32 HOH HOH . E 4 HOH A 104 504 124 HOH HOH . E 4 HOH A 105 505 122 HOH HOH . E 4 HOH A 106 506 105 HOH HOH . E 4 HOH A 107 507 50 HOH HOH . E 4 HOH A 108 508 84 HOH HOH . E 4 HOH A 109 509 88 HOH HOH . E 4 HOH A 110 510 43 HOH HOH . E 4 HOH A 111 511 25 HOH HOH . E 4 HOH A 112 512 95 HOH HOH . E 4 HOH A 113 513 60 HOH HOH . E 4 HOH A 114 514 61 HOH HOH . E 4 HOH A 115 515 45 HOH HOH . E 4 HOH A 116 516 96 HOH HOH . E 4 HOH A 117 517 87 HOH HOH . E 4 HOH A 118 518 118 HOH HOH . E 4 HOH A 119 519 29 HOH HOH . E 4 HOH A 120 520 85 HOH HOH . E 4 HOH A 121 521 112 HOH HOH . E 4 HOH A 122 522 119 HOH HOH . E 4 HOH A 123 523 104 HOH HOH . E 4 HOH A 124 524 75 HOH HOH . E 4 HOH A 125 525 126 HOH HOH . E 4 HOH A 126 526 103 HOH HOH . E 4 HOH A 127 527 65 HOH HOH . E 4 HOH A 128 528 125 HOH HOH . E 4 HOH A 129 529 77 HOH HOH . E 4 HOH A 130 530 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 12.706 6.88 -22.484 1 52.07 ? C1 EDO 302 A 1 HETATM 2 O O1 EDO . . . C 3 13.921 7.552 -22.729 1 51.3 ? O1 EDO 302 A 1 HETATM 3 C C2 EDO . . . C 3 11.619 7.839 -22.222 1 49.62 ? C2 EDO 302 A 1 HETATM 4 O O2 EDO . . . C 3 11.641 8.939 -23.116 1 46.6 ? O2 EDO 302 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 23 _model_server_stats.element_count 4 #