data_8I69 # _model_server_result.job_id -HPbardgzlkJTrc0Gz6kjQ _model_server_result.datetime_utc '2024-11-24 14:41:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i69 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 8I69 # _exptl.entry_id 8I69 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.48 _cell.angle_gamma 90 _cell.entry_id 8I69 _cell.length_a 39.11 _cell.length_b 64.14 _cell.length_c 45.28 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I69 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 8I69 _atom_sites.fract_transf_matrix[1][1] 0.025569 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010581 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015591 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023901 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FOT A 1 301 301 FOT FOT . C 3 CIT A 1 302 401 CIT CIT . D 4 EDO A 1 303 501 EDO EDO . E 4 EDO A 1 304 601 EDO EDO . F 5 HOH A 1 401 155 HOH HOH . F 5 HOH A 2 402 126 HOH HOH . F 5 HOH A 3 403 114 HOH HOH . F 5 HOH A 4 404 157 HOH HOH . F 5 HOH A 5 405 184 HOH HOH . F 5 HOH A 6 406 164 HOH HOH . F 5 HOH A 7 407 166 HOH HOH . F 5 HOH A 8 408 116 HOH HOH . F 5 HOH A 9 409 55 HOH HOH . F 5 HOH A 10 410 33 HOH HOH . F 5 HOH A 11 411 102 HOH HOH . F 5 HOH A 12 412 76 HOH HOH . F 5 HOH A 13 413 181 HOH HOH . F 5 HOH A 14 414 12 HOH HOH . F 5 HOH A 15 415 64 HOH HOH . F 5 HOH A 16 416 78 HOH HOH . F 5 HOH A 17 417 180 HOH HOH . F 5 HOH A 18 418 111 HOH HOH . F 5 HOH A 19 419 82 HOH HOH . F 5 HOH A 20 420 154 HOH HOH . F 5 HOH A 21 421 100 HOH HOH . F 5 HOH A 22 422 54 HOH HOH . F 5 HOH A 23 423 172 HOH HOH . F 5 HOH A 24 424 160 HOH HOH . F 5 HOH A 25 425 21 HOH HOH . F 5 HOH A 26 426 62 HOH HOH . F 5 HOH A 27 427 107 HOH HOH . F 5 HOH A 28 428 89 HOH HOH . F 5 HOH A 29 429 36 HOH HOH . F 5 HOH A 30 430 167 HOH HOH . F 5 HOH A 31 431 173 HOH HOH . F 5 HOH A 32 432 29 HOH HOH . F 5 HOH A 33 433 53 HOH HOH . F 5 HOH A 34 434 16 HOH HOH . F 5 HOH A 35 435 15 HOH HOH . F 5 HOH A 36 436 168 HOH HOH . F 5 HOH A 37 437 115 HOH HOH . F 5 HOH A 38 438 27 HOH HOH . F 5 HOH A 39 439 77 HOH HOH . F 5 HOH A 40 440 8 HOH HOH . F 5 HOH A 41 441 30 HOH HOH . F 5 HOH A 42 442 149 HOH HOH . F 5 HOH A 43 443 152 HOH HOH . F 5 HOH A 44 444 80 HOH HOH . F 5 HOH A 45 445 147 HOH HOH . F 5 HOH A 46 446 133 HOH HOH . F 5 HOH A 47 447 59 HOH HOH . F 5 HOH A 48 448 156 HOH HOH . F 5 HOH A 49 449 175 HOH HOH . F 5 HOH A 50 450 2 HOH HOH . F 5 HOH A 51 451 151 HOH HOH . F 5 HOH A 52 452 38 HOH HOH . F 5 HOH A 53 453 125 HOH HOH . F 5 HOH A 54 454 88 HOH HOH . F 5 HOH A 55 455 159 HOH HOH . F 5 HOH A 56 456 108 HOH HOH . F 5 HOH A 57 457 3 HOH HOH . F 5 HOH A 58 458 5 HOH HOH . F 5 HOH A 59 459 46 HOH HOH . F 5 HOH A 60 460 165 HOH HOH . F 5 HOH A 61 461 1 HOH HOH . F 5 HOH A 62 462 23 HOH HOH . F 5 HOH A 63 463 110 HOH HOH . F 5 HOH A 64 464 90 HOH HOH . F 5 HOH A 65 465 13 HOH HOH . F 5 HOH A 66 466 98 HOH HOH . F 5 HOH A 67 467 112 HOH HOH . F 5 HOH A 68 468 146 HOH HOH . F 5 HOH A 69 469 87 HOH HOH . F 5 HOH A 70 470 26 HOH HOH . F 5 HOH A 71 471 104 HOH HOH . F 5 HOH A 72 472 94 HOH HOH . F 5 HOH A 73 473 44 HOH HOH . F 5 HOH A 74 474 162 HOH HOH . F 5 HOH A 75 475 51 HOH HOH . F 5 HOH A 76 476 179 HOH HOH . F 5 HOH A 77 477 42 HOH HOH . F 5 HOH A 78 478 4 HOH HOH . F 5 HOH A 79 479 45 HOH HOH . F 5 HOH A 80 480 153 HOH HOH . F 5 HOH A 81 481 10 HOH HOH . F 5 HOH A 82 482 177 HOH HOH . F 5 HOH A 83 483 83 HOH HOH . F 5 HOH A 84 484 68 HOH HOH . F 5 HOH A 85 485 18 HOH HOH . F 5 HOH A 86 486 171 HOH HOH . F 5 HOH A 87 487 71 HOH HOH . F 5 HOH A 88 488 67 HOH HOH . F 5 HOH A 89 489 192 HOH HOH . F 5 HOH A 90 490 25 HOH HOH . F 5 HOH A 91 491 48 HOH HOH . F 5 HOH A 92 492 122 HOH HOH . F 5 HOH A 93 493 131 HOH HOH . F 5 HOH A 94 494 105 HOH HOH . F 5 HOH A 95 495 85 HOH HOH . F 5 HOH A 96 496 190 HOH HOH . F 5 HOH A 97 497 34 HOH HOH . F 5 HOH A 98 498 84 HOH HOH . F 5 HOH A 99 499 113 HOH HOH . F 5 HOH A 100 500 170 HOH HOH . F 5 HOH A 101 501 106 HOH HOH . F 5 HOH A 102 502 32 HOH HOH . F 5 HOH A 103 503 47 HOH HOH . F 5 HOH A 104 504 19 HOH HOH . F 5 HOH A 105 505 72 HOH HOH . F 5 HOH A 106 506 20 HOH HOH . F 5 HOH A 107 507 6 HOH HOH . F 5 HOH A 108 508 39 HOH HOH . F 5 HOH A 109 509 63 HOH HOH . F 5 HOH A 110 510 35 HOH HOH . F 5 HOH A 111 511 96 HOH HOH . F 5 HOH A 112 512 118 HOH HOH . F 5 HOH A 113 513 28 HOH HOH . F 5 HOH A 114 514 150 HOH HOH . F 5 HOH A 115 515 194 HOH HOH . F 5 HOH A 116 516 65 HOH HOH . F 5 HOH A 117 517 86 HOH HOH . F 5 HOH A 118 518 123 HOH HOH . F 5 HOH A 119 519 119 HOH HOH . F 5 HOH A 120 520 9 HOH HOH . F 5 HOH A 121 521 49 HOH HOH . F 5 HOH A 122 522 22 HOH HOH . F 5 HOH A 123 523 124 HOH HOH . F 5 HOH A 124 524 70 HOH HOH . F 5 HOH A 125 525 50 HOH HOH . F 5 HOH A 126 526 178 HOH HOH . F 5 HOH A 127 527 7 HOH HOH . F 5 HOH A 128 528 120 HOH HOH . F 5 HOH A 129 529 60 HOH HOH . F 5 HOH A 130 530 17 HOH HOH . F 5 HOH A 131 531 161 HOH HOH . F 5 HOH A 132 532 14 HOH HOH . F 5 HOH A 133 533 61 HOH HOH . F 5 HOH A 134 534 52 HOH HOH . F 5 HOH A 135 535 73 HOH HOH . F 5 HOH A 136 536 58 HOH HOH . F 5 HOH A 137 537 196 HOH HOH . F 5 HOH A 138 538 24 HOH HOH . F 5 HOH A 139 539 99 HOH HOH . F 5 HOH A 140 540 11 HOH HOH . F 5 HOH A 141 541 101 HOH HOH . F 5 HOH A 142 542 41 HOH HOH . F 5 HOH A 143 543 195 HOH HOH . F 5 HOH A 144 544 148 HOH HOH . F 5 HOH A 145 545 97 HOH HOH . F 5 HOH A 146 546 140 HOH HOH . F 5 HOH A 147 547 79 HOH HOH . F 5 HOH A 148 548 92 HOH HOH . F 5 HOH A 149 549 31 HOH HOH . F 5 HOH A 150 550 117 HOH HOH . F 5 HOH A 151 551 163 HOH HOH . F 5 HOH A 152 552 75 HOH HOH . F 5 HOH A 153 553 66 HOH HOH . F 5 HOH A 154 554 176 HOH HOH . F 5 HOH A 155 555 43 HOH HOH . F 5 HOH A 156 556 142 HOH HOH . F 5 HOH A 157 557 174 HOH HOH . F 5 HOH A 158 558 189 HOH HOH . F 5 HOH A 159 559 134 HOH HOH . F 5 HOH A 160 560 109 HOH HOH . F 5 HOH A 161 561 127 HOH HOH . F 5 HOH A 162 562 40 HOH HOH . F 5 HOH A 163 563 74 HOH HOH . F 5 HOH A 164 564 139 HOH HOH . F 5 HOH A 165 565 138 HOH HOH . F 5 HOH A 166 566 95 HOH HOH . F 5 HOH A 167 567 187 HOH HOH . F 5 HOH A 168 568 57 HOH HOH . F 5 HOH A 169 569 93 HOH HOH . F 5 HOH A 170 570 191 HOH HOH . F 5 HOH A 171 571 129 HOH HOH . F 5 HOH A 172 572 56 HOH HOH . F 5 HOH A 173 573 132 HOH HOH . F 5 HOH A 174 574 130 HOH HOH . F 5 HOH A 175 575 121 HOH HOH . F 5 HOH A 176 576 135 HOH HOH . F 5 HOH A 177 577 193 HOH HOH . F 5 HOH A 178 578 136 HOH HOH . F 5 HOH A 179 579 158 HOH HOH . F 5 HOH A 180 580 81 HOH HOH . F 5 HOH A 181 581 69 HOH HOH . F 5 HOH A 182 582 128 HOH HOH . F 5 HOH A 183 583 141 HOH HOH . F 5 HOH A 184 584 186 HOH HOH . F 5 HOH A 185 585 37 HOH HOH . F 5 HOH A 186 586 183 HOH HOH . F 5 HOH A 187 587 185 HOH HOH . F 5 HOH A 188 588 103 HOH HOH . F 5 HOH A 189 589 145 HOH HOH . F 5 HOH A 190 590 144 HOH HOH . F 5 HOH A 191 591 182 HOH HOH . F 5 HOH A 192 592 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 3 19.481 -1.605 36.209 1 40.62 ? C1 CIT 302 A 1 HETATM 2 O O1 CIT . . . C 3 18.749 -0.723 35.693 1 40.29 ? O1 CIT 302 A 1 HETATM 3 O O2 CIT . . . C 3 19.189 -2.219 37.259 1 40.9 ? O2 CIT 302 A 1 HETATM 4 C C2 CIT . . . C 3 20.791 -1.954 35.511 1 37.62 ? C2 CIT 302 A 1 HETATM 5 C C3 CIT . . . C 3 22.019 -2.116 36.421 1 36.12 ? C3 CIT 302 A 1 HETATM 6 O O7 CIT . . . C 3 21.841 -3.264 37.236 1 35.39 ? O7 CIT 302 A 1 HETATM 7 C C4 CIT . . . C 3 23.257 -2.349 35.544 1 34.47 ? C4 CIT 302 A 1 HETATM 8 C C5 CIT . . . C 3 24.599 -2.277 36.253 1 33.15 ? C5 CIT 302 A 1 HETATM 9 O O3 CIT . . . C 3 25.596 -2.108 35.554 1 33.16 ? O3 CIT 302 A 1 HETATM 10 O O4 CIT . . . C 3 24.646 -2.382 37.483 1 31.82 ? O4 CIT 302 A 1 HETATM 11 C C6 CIT . . . C 3 22.213 -0.837 37.295 1 35.48 ? C6 CIT 302 A 1 HETATM 12 O O5 CIT . . . C 3 22.424 0.251 36.709 1 35.53 ? O5 CIT 302 A 1 HETATM 13 O O6 CIT . . . C 3 22.173 -0.981 38.538 1 34.57 ? O6 CIT 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #