data_8I6B # _model_server_result.job_id 4bCSt6MVqOTRDnVXqy0blw _model_server_result.datetime_utc '2024-10-15 11:19:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i6b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 8I6B # _exptl.entry_id 8I6B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.58 _cell.angle_gamma 90 _cell.entry_id 8I6B _cell.length_a 39.16 _cell.length_b 63.68 _cell.length_c 45.19 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I6B _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id O _struct_conn.ptnr1_label_comp_id PRO _struct_conn.ptnr1_label_seq_id 67 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id PRO _struct_conn.ptnr1_auth_seq_id 56 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id NA _struct_conn.ptnr2_label_comp_id NA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NA _struct_conn.ptnr2_auth_seq_id 308 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.87 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 8I6B _atom_sites.fract_transf_matrix[1][1] 0.025536 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.010619 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015704 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ODF A 1 301 301 ODF UNL . C 3 EDO A 1 302 401 EDO EDO . D 4 DMS A 1 303 501 DMS DMS . E 4 DMS A 1 304 601 DMS DMS . F 4 DMS A 1 305 901 DMS DMS . G 4 DMS A 1 306 1001 DMS DMS . H 4 DMS A 1 307 1101 DMS DMS . I 5 NA A 1 308 1 NA NA . J 6 CL A 1 309 1 CL CL . K 6 CL A 1 310 3 CL CL . L 6 CL A 1 311 4 CL CL . M 7 HOH A 1 401 90 HOH HOH . M 7 HOH A 2 402 435 HOH HOH . M 7 HOH A 3 403 99 HOH HOH . M 7 HOH A 4 404 123 HOH HOH . M 7 HOH A 5 405 94 HOH HOH . M 7 HOH A 6 406 155 HOH HOH . M 7 HOH A 7 407 428 HOH HOH . M 7 HOH A 8 408 426 HOH HOH . M 7 HOH A 9 409 333 HOH HOH . M 7 HOH A 10 410 436 HOH HOH . M 7 HOH A 11 411 74 HOH HOH . M 7 HOH A 12 412 61 HOH HOH . M 7 HOH A 13 413 434 HOH HOH . M 7 HOH A 14 414 377 HOH HOH . M 7 HOH A 15 415 183 HOH HOH . M 7 HOH A 16 416 107 HOH HOH . M 7 HOH A 17 417 118 HOH HOH . M 7 HOH A 18 418 70 HOH HOH . M 7 HOH A 19 419 21 HOH HOH . M 7 HOH A 20 420 419 HOH HOH . M 7 HOH A 21 421 41 HOH HOH . M 7 HOH A 22 422 81 HOH HOH . M 7 HOH A 23 423 189 HOH HOH . M 7 HOH A 24 424 131 HOH HOH . M 7 HOH A 25 425 252 HOH HOH . M 7 HOH A 26 426 425 HOH HOH . M 7 HOH A 27 427 135 HOH HOH . M 7 HOH A 28 428 56 HOH HOH . M 7 HOH A 29 429 229 HOH HOH . M 7 HOH A 30 430 13 HOH HOH . M 7 HOH A 31 431 71 HOH HOH . M 7 HOH A 32 432 158 HOH HOH . M 7 HOH A 33 433 219 HOH HOH . M 7 HOH A 34 434 286 HOH HOH . M 7 HOH A 35 435 30 HOH HOH . M 7 HOH A 36 436 35 HOH HOH . M 7 HOH A 37 437 197 HOH HOH . M 7 HOH A 38 438 50 HOH HOH . M 7 HOH A 39 439 40 HOH HOH . M 7 HOH A 40 440 101 HOH HOH . M 7 HOH A 41 441 5 HOH HOH . M 7 HOH A 42 442 122 HOH HOH . M 7 HOH A 43 443 72 HOH HOH . M 7 HOH A 44 444 416 HOH HOH . M 7 HOH A 45 445 32 HOH HOH . M 7 HOH A 46 446 203 HOH HOH . M 7 HOH A 47 447 417 HOH HOH . M 7 HOH A 48 448 327 HOH HOH . M 7 HOH A 49 449 104 HOH HOH . M 7 HOH A 50 450 7 HOH HOH . M 7 HOH A 51 451 26 HOH HOH . M 7 HOH A 52 452 52 HOH HOH . M 7 HOH A 53 453 187 HOH HOH . M 7 HOH A 54 454 414 HOH HOH . M 7 HOH A 55 455 3 HOH HOH . M 7 HOH A 56 456 241 HOH HOH . M 7 HOH A 57 457 31 HOH HOH . M 7 HOH A 58 458 2 HOH HOH . M 7 HOH A 59 459 181 HOH HOH . M 7 HOH A 60 460 17 HOH HOH . M 7 HOH A 61 461 239 HOH HOH . M 7 HOH A 62 462 55 HOH HOH . M 7 HOH A 63 463 167 HOH HOH . M 7 HOH A 64 464 160 HOH HOH . M 7 HOH A 65 465 18 HOH HOH . M 7 HOH A 66 466 87 HOH HOH . M 7 HOH A 67 467 95 HOH HOH . M 7 HOH A 68 468 213 HOH HOH . M 7 HOH A 69 469 110 HOH HOH . M 7 HOH A 70 470 143 HOH HOH . M 7 HOH A 71 471 96 HOH HOH . M 7 HOH A 72 472 86 HOH HOH . M 7 HOH A 73 473 29 HOH HOH . M 7 HOH A 74 474 140 HOH HOH . M 7 HOH A 75 475 265 HOH HOH . M 7 HOH A 76 476 433 HOH HOH . M 7 HOH A 77 477 88 HOH HOH . M 7 HOH A 78 478 11 HOH HOH . M 7 HOH A 79 479 44 HOH HOH . M 7 HOH A 80 480 174 HOH HOH . M 7 HOH A 81 481 12 HOH HOH . M 7 HOH A 82 482 9 HOH HOH . M 7 HOH A 83 483 14 HOH HOH . M 7 HOH A 84 484 53 HOH HOH . M 7 HOH A 85 485 111 HOH HOH . M 7 HOH A 86 486 287 HOH HOH . M 7 HOH A 87 487 263 HOH HOH . M 7 HOH A 88 488 24 HOH HOH . M 7 HOH A 89 489 117 HOH HOH . M 7 HOH A 90 490 224 HOH HOH . M 7 HOH A 91 491 34 HOH HOH . M 7 HOH A 92 492 43 HOH HOH . M 7 HOH A 93 493 58 HOH HOH . M 7 HOH A 94 494 159 HOH HOH . M 7 HOH A 95 495 39 HOH HOH . M 7 HOH A 96 496 126 HOH HOH . M 7 HOH A 97 497 102 HOH HOH . M 7 HOH A 98 498 192 HOH HOH . M 7 HOH A 99 499 27 HOH HOH . M 7 HOH A 100 500 130 HOH HOH . M 7 HOH A 101 501 57 HOH HOH . M 7 HOH A 102 502 37 HOH HOH . M 7 HOH A 103 503 147 HOH HOH . M 7 HOH A 104 504 141 HOH HOH . M 7 HOH A 105 505 121 HOH HOH . M 7 HOH A 106 506 387 HOH HOH . M 7 HOH A 107 507 36 HOH HOH . M 7 HOH A 108 508 73 HOH HOH . M 7 HOH A 109 509 48 HOH HOH . M 7 HOH A 110 510 46 HOH HOH . M 7 HOH A 111 511 79 HOH HOH . M 7 HOH A 112 512 437 HOH HOH . M 7 HOH A 113 513 22 HOH HOH . M 7 HOH A 114 514 54 HOH HOH . M 7 HOH A 115 515 208 HOH HOH . M 7 HOH A 116 516 422 HOH HOH . M 7 HOH A 117 517 108 HOH HOH . M 7 HOH A 118 518 103 HOH HOH . M 7 HOH A 119 519 206 HOH HOH . M 7 HOH A 120 520 64 HOH HOH . M 7 HOH A 121 521 69 HOH HOH . M 7 HOH A 122 522 80 HOH HOH . M 7 HOH A 123 523 67 HOH HOH . M 7 HOH A 124 524 8 HOH HOH . M 7 HOH A 125 525 388 HOH HOH . M 7 HOH A 126 526 97 HOH HOH . M 7 HOH A 127 527 150 HOH HOH . M 7 HOH A 128 528 82 HOH HOH . M 7 HOH A 129 529 38 HOH HOH . M 7 HOH A 130 530 177 HOH HOH . M 7 HOH A 131 531 77 HOH HOH . M 7 HOH A 132 532 28 HOH HOH . M 7 HOH A 133 533 47 HOH HOH . M 7 HOH A 134 534 148 HOH HOH . M 7 HOH A 135 535 16 HOH HOH . M 7 HOH A 136 536 68 HOH HOH . M 7 HOH A 137 537 152 HOH HOH . M 7 HOH A 138 538 243 HOH HOH . M 7 HOH A 139 539 124 HOH HOH . M 7 HOH A 140 540 20 HOH HOH . M 7 HOH A 141 541 62 HOH HOH . M 7 HOH A 142 542 157 HOH HOH . M 7 HOH A 143 543 120 HOH HOH . M 7 HOH A 144 544 202 HOH HOH . M 7 HOH A 145 545 199 HOH HOH . M 7 HOH A 146 546 93 HOH HOH . M 7 HOH A 147 547 145 HOH HOH . M 7 HOH A 148 548 172 HOH HOH . M 7 HOH A 149 549 338 HOH HOH . M 7 HOH A 150 550 249 HOH HOH . M 7 HOH A 151 551 221 HOH HOH . M 7 HOH A 152 552 195 HOH HOH . M 7 HOH A 153 553 23 HOH HOH . M 7 HOH A 154 554 372 HOH HOH . M 7 HOH A 155 555 75 HOH HOH . M 7 HOH A 156 556 19 HOH HOH . M 7 HOH A 157 557 59 HOH HOH . M 7 HOH A 158 558 214 HOH HOH . M 7 HOH A 159 559 15 HOH HOH . M 7 HOH A 160 560 84 HOH HOH . M 7 HOH A 161 561 439 HOH HOH . M 7 HOH A 162 562 10 HOH HOH . M 7 HOH A 163 563 236 HOH HOH . M 7 HOH A 164 564 297 HOH HOH . M 7 HOH A 165 565 352 HOH HOH . M 7 HOH A 166 566 284 HOH HOH . M 7 HOH A 167 567 216 HOH HOH . M 7 HOH A 168 568 92 HOH HOH . M 7 HOH A 169 569 85 HOH HOH . M 7 HOH A 170 570 146 HOH HOH . M 7 HOH A 171 571 51 HOH HOH . M 7 HOH A 172 572 259 HOH HOH . M 7 HOH A 173 573 63 HOH HOH . M 7 HOH A 174 574 235 HOH HOH . M 7 HOH A 175 575 112 HOH HOH . M 7 HOH A 176 576 226 HOH HOH . M 7 HOH A 177 577 269 HOH HOH . M 7 HOH A 178 578 280 HOH HOH . M 7 HOH A 179 579 45 HOH HOH . M 7 HOH A 180 580 116 HOH HOH . M 7 HOH A 181 581 370 HOH HOH . M 7 HOH A 182 582 156 HOH HOH . M 7 HOH A 183 583 115 HOH HOH . M 7 HOH A 184 584 162 HOH HOH . M 7 HOH A 185 585 381 HOH HOH . M 7 HOH A 186 586 25 HOH HOH . M 7 HOH A 187 587 186 HOH HOH . M 7 HOH A 188 588 363 HOH HOH . M 7 HOH A 189 589 210 HOH HOH . M 7 HOH A 190 590 100 HOH HOH . M 7 HOH A 191 591 129 HOH HOH . M 7 HOH A 192 592 268 HOH HOH . M 7 HOH A 193 593 415 HOH HOH . M 7 HOH A 194 594 228 HOH HOH . M 7 HOH A 195 595 125 HOH HOH . M 7 HOH A 196 596 438 HOH HOH . M 7 HOH A 197 597 276 HOH HOH . M 7 HOH A 198 598 281 HOH HOH . M 7 HOH A 199 599 371 HOH HOH . M 7 HOH A 200 600 173 HOH HOH . M 7 HOH A 201 601 138 HOH HOH . M 7 HOH A 202 602 367 HOH HOH . M 7 HOH A 203 603 262 HOH HOH . M 7 HOH A 204 604 384 HOH HOH . M 7 HOH A 205 605 209 HOH HOH . M 7 HOH A 206 606 164 HOH HOH . M 7 HOH A 207 607 105 HOH HOH . M 7 HOH A 208 608 78 HOH HOH . M 7 HOH A 209 609 294 HOH HOH . M 7 HOH A 210 610 154 HOH HOH . M 7 HOH A 211 611 432 HOH HOH . M 7 HOH A 212 612 365 HOH HOH . M 7 HOH A 213 613 119 HOH HOH . M 7 HOH A 214 614 402 HOH HOH . M 7 HOH A 215 615 65 HOH HOH . M 7 HOH A 216 616 266 HOH HOH . M 7 HOH A 217 617 128 HOH HOH . M 7 HOH A 218 618 418 HOH HOH . M 7 HOH A 219 619 136 HOH HOH . M 7 HOH A 220 620 302 HOH HOH . M 7 HOH A 221 621 132 HOH HOH . M 7 HOH A 222 622 113 HOH HOH . M 7 HOH A 223 623 222 HOH HOH . M 7 HOH A 224 624 366 HOH HOH . M 7 HOH A 225 625 368 HOH HOH . M 7 HOH A 226 626 153 HOH HOH . M 7 HOH A 227 627 421 HOH HOH . M 7 HOH A 228 628 232 HOH HOH . M 7 HOH A 229 629 98 HOH HOH . M 7 HOH A 230 630 398 HOH HOH . M 7 HOH A 231 631 184 HOH HOH . M 7 HOH A 232 632 424 HOH HOH . M 7 HOH A 233 633 180 HOH HOH . M 7 HOH A 234 634 49 HOH HOH . M 7 HOH A 235 635 188 HOH HOH . M 7 HOH A 236 636 223 HOH HOH . M 7 HOH A 237 637 201 HOH HOH . M 7 HOH A 238 638 163 HOH HOH . M 7 HOH A 239 639 169 HOH HOH . M 7 HOH A 240 640 317 HOH HOH . M 7 HOH A 241 641 285 HOH HOH . M 7 HOH A 242 642 369 HOH HOH . M 7 HOH A 243 643 376 HOH HOH . M 7 HOH A 244 644 244 HOH HOH . M 7 HOH A 245 645 198 HOH HOH . M 7 HOH A 246 646 161 HOH HOH . M 7 HOH A 247 647 76 HOH HOH . M 7 HOH A 248 648 318 HOH HOH . M 7 HOH A 249 649 217 HOH HOH . M 7 HOH A 250 650 133 HOH HOH . M 7 HOH A 251 651 275 HOH HOH . M 7 HOH A 252 652 242 HOH HOH . M 7 HOH A 253 653 215 HOH HOH . M 7 HOH A 254 654 91 HOH HOH . M 7 HOH A 255 655 139 HOH HOH . M 7 HOH A 256 656 165 HOH HOH . M 7 HOH A 257 657 334 HOH HOH . M 7 HOH A 258 658 200 HOH HOH . M 7 HOH A 259 659 257 HOH HOH . M 7 HOH A 260 660 234 HOH HOH . M 7 HOH A 261 661 374 HOH HOH . M 7 HOH A 262 662 175 HOH HOH . M 7 HOH A 263 663 255 HOH HOH . M 7 HOH A 264 664 114 HOH HOH . M 7 HOH A 265 665 355 HOH HOH . M 7 HOH A 266 666 379 HOH HOH . M 7 HOH A 267 667 60 HOH HOH . M 7 HOH A 268 668 89 HOH HOH . M 7 HOH A 269 669 240 HOH HOH . M 7 HOH A 270 670 373 HOH HOH . M 7 HOH A 271 671 427 HOH HOH . M 7 HOH A 272 672 256 HOH HOH . M 7 HOH A 273 673 341 HOH HOH . M 7 HOH A 274 674 106 HOH HOH . M 7 HOH A 275 675 408 HOH HOH . M 7 HOH A 276 676 171 HOH HOH . M 7 HOH A 277 677 277 HOH HOH . M 7 HOH A 278 678 127 HOH HOH . M 7 HOH A 279 679 412 HOH HOH . M 7 HOH A 280 680 393 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . E 4 42.503 -21.671 48.589 1 37.24 ? S DMS 304 A 1 HETATM 2 O O DMS . . . E 4 43.017 -20.779 47.515 1 45.61 ? O DMS 304 A 1 HETATM 3 C C1 DMS . . . E 4 41.173 -20.84 49.441 1 30.14 ? C1 DMS 304 A 1 HETATM 4 C C2 DMS . . . E 4 41.522 -22.859 47.767 1 31.23 ? C2 DMS 304 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 370 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #