data_8I7W # _model_server_result.job_id oZ6Lh06yFC8Ewv2Oo-z4Eg _model_server_result.datetime_utc '2024-10-11 00:28:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 8I7W # _exptl.entry_id 8I7W _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.689 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 8-chloranyl-3-pentyl-7H-purine-2,6-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8I7W _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 131 A CYS 18 1_555 A SG CYS 296 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 213 A CYS 100 1_555 A SG CYS 290 A CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 C SG CYS 126 C CYS 121 1_555 C SG CYS 154 C CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf4 E SG CYS 22 E CYS 22 1_555 E SG CYS 96 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 E SG CYS 159 E CYS 159 1_555 E SG CYS 229 E CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C10 H13 Cl N4 O2' _chem_comp.formula_weight 256.689 _chem_comp.id OKL _chem_comp.mon_nstd_flag . _chem_comp.name 8-chloranyl-3-pentyl-7H-purine-2,6-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O08 C07 OKL doub 235 n n C01 C02 OKL sing 236 n n C07 N09 OKL sing 237 n n C07 N06 OKL sing 238 n n C02 C03 OKL sing 239 n n N09 C10 OKL sing 240 n n C05 N06 OKL sing 241 n n C05 C04 OKL sing 242 n n N06 C13 OKL sing 243 n n C10 O11 OKL doub 244 n n C10 C12 OKL sing 245 n n C03 C04 OKL sing 246 n n C13 C12 OKL doub 247 n y C13 N14 OKL sing 248 n y C12 N16 OKL sing 249 n y N14 C15 OKL doub 250 n y N16 C15 OKL sing 251 n y C15 CL17 OKL sing 252 n n C01 H1 OKL sing 253 n n C01 H2 OKL sing 254 n n C01 H3 OKL sing 255 n n C02 H4 OKL sing 256 n n C02 H5 OKL sing 257 n n C03 H6 OKL sing 258 n n C03 H7 OKL sing 259 n n C04 H8 OKL sing 260 n n C04 H9 OKL sing 261 n n C05 H10 OKL sing 262 n n C05 H11 OKL sing 263 n n N09 H12 OKL sing 264 n n N16 H14 OKL sing 265 n n # _atom_sites.entry_id 8I7W _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id OKL _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 301 _pdbx_nonpoly_scheme.pdb_mon_id OKL _pdbx_nonpoly_scheme.auth_mon_id GSK _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OKL . . . F 6 116.753 118.156 102.342 1 82.53 ? C10 OKL 401 A 1 HETATM 2 C C12 OKL . . . F 6 117.706 117.177 101.955 1 77.02 ? C12 OKL 401 A 1 HETATM 3 C C13 OKL . . . F 6 117.434 116.379 100.877 1 77.66 ? C13 OKL 401 A 1 HETATM 4 C C15 OKL . . . F 6 119.375 115.816 101.664 1 87.11 ? C15 OKL 401 A 1 HETATM 5 C C01 OKL . . . F 6 114.478 112.538 102.662 1 89.86 ? C01 OKL 401 A 1 HETATM 6 C C02 OKL . . . F 6 114.683 112.664 101.154 1 88.69 ? C02 OKL 401 A 1 HETATM 7 C C03 OKL . . . F 6 114.874 114.117 100.728 1 87.41 ? C03 OKL 401 A 1 HETATM 8 C C04 OKL . . . F 6 115.783 114.265 99.508 1 83.77 ? C04 OKL 401 A 1 HETATM 9 C C05 OKL . . . F 6 115.955 115.723 99.084 1 85.09 ? C05 OKL 401 A 1 HETATM 10 C C07 OKL . . . F 6 115.395 117.48 100.612 1 87.15 ? C07 OKL 401 A 1 HETATM 11 N N06 OKL . . . F 6 116.261 116.559 100.228 1 81.83 ? N06 OKL 401 A 1 HETATM 12 N N09 OKL . . . F 6 115.628 118.271 101.653 1 87.07 ? N09 OKL 401 A 1 HETATM 13 N N14 OKL . . . F 6 118.493 115.544 100.724 1 84.17 ? N14 OKL 401 A 1 HETATM 14 N N16 OKL . . . F 6 118.925 116.804 102.425 1 80.71 ? N16 OKL 401 A 1 HETATM 15 O O08 OKL . . . F 6 114.197 117.624 99.905 1 88.64 ? O08 OKL 401 A 1 HETATM 16 O O11 OKL . . . F 6 116.996 118.988 103.437 1 88 ? O11 OKL 401 A 1 HETATM 17 CL CL17 OKL . . . F 6 120.934 114.972 101.861 1 87.57 ? CL17 OKL 401 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 543 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 17 #