data_8I8I # _model_server_result.job_id adyw1wTvPZTYxer1T1JCOg _model_server_result.datetime_utc '2024-10-20 01:28:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8i8i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 8I8I # _exptl.entry_id 8I8I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8I8I _cell.length_a 72.819 _cell.length_b 72.819 _cell.length_c 200.365 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8I8I _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F 1 1 C,D,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_466 y-1,x+1,-z+1 0 1 0 1 0 0 0 0 -1 -72.819 72.819 200.365 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8I8I _atom_sites.fract_transf_matrix[1][1] 0.013733 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013733 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 EDO C 1 201 201 EDO EDO . E 3 HOH A 1 201 204 HOH HOH . E 3 HOH A 2 202 201 HOH HOH . E 3 HOH A 3 203 203 HOH HOH . E 3 HOH A 4 204 209 HOH HOH . E 3 HOH A 5 205 17 HOH HOH . E 3 HOH A 6 206 205 HOH HOH . E 3 HOH A 7 207 211 HOH HOH . E 3 HOH A 8 208 16 HOH HOH . E 3 HOH A 9 209 219 HOH HOH . E 3 HOH A 10 210 212 HOH HOH . E 3 HOH A 11 211 218 HOH HOH . E 3 HOH A 12 212 215 HOH HOH . E 3 HOH A 13 213 14 HOH HOH . E 3 HOH A 14 214 214 HOH HOH . E 3 HOH A 15 215 217 HOH HOH . E 3 HOH A 16 216 222 HOH HOH . E 3 HOH A 17 217 213 HOH HOH . E 3 HOH A 18 218 220 HOH HOH . E 3 HOH A 19 219 229 HOH HOH . E 3 HOH A 20 220 237 HOH HOH . E 3 HOH A 21 221 226 HOH HOH . E 3 HOH A 22 222 1 HOH HOH . E 3 HOH A 23 223 223 HOH HOH . E 3 HOH A 24 224 227 HOH HOH . E 3 HOH A 25 225 228 HOH HOH . E 3 HOH A 26 226 230 HOH HOH . E 3 HOH A 27 227 231 HOH HOH . E 3 HOH A 28 228 235 HOH HOH . E 3 HOH A 29 229 232 HOH HOH . E 3 HOH A 30 230 238 HOH HOH . E 3 HOH A 31 231 243 HOH HOH . E 3 HOH A 32 232 239 HOH HOH . E 3 HOH A 33 233 241 HOH HOH . E 3 HOH A 34 234 240 HOH HOH . E 3 HOH A 35 235 3 HOH HOH . E 3 HOH A 36 236 245 HOH HOH . E 3 HOH A 37 237 246 HOH HOH . E 3 HOH A 38 238 247 HOH HOH . E 3 HOH A 39 239 248 HOH HOH . E 3 HOH A 40 240 225 HOH HOH . E 3 HOH A 41 241 251 HOH HOH . E 3 HOH A 42 242 252 HOH HOH . E 3 HOH A 43 243 253 HOH HOH . F 3 HOH B 1 201 4 HOH HOH . F 3 HOH B 2 202 202 HOH HOH . F 3 HOH B 3 203 204 HOH HOH . F 3 HOH B 4 204 203 HOH HOH . F 3 HOH B 5 205 15 HOH HOH . F 3 HOH B 6 206 206 HOH HOH . F 3 HOH B 7 207 205 HOH HOH . F 3 HOH B 8 208 13 HOH HOH . F 3 HOH B 9 209 210 HOH HOH . F 3 HOH B 10 210 209 HOH HOH . F 3 HOH B 11 211 12 HOH HOH . F 3 HOH B 12 212 23 HOH HOH . F 3 HOH B 13 213 214 HOH HOH . F 3 HOH B 14 214 216 HOH HOH . F 3 HOH B 15 215 10 HOH HOH . F 3 HOH B 16 216 226 HOH HOH . F 3 HOH B 17 217 217 HOH HOH . F 3 HOH B 18 218 218 HOH HOH . F 3 HOH B 19 219 11 HOH HOH . F 3 HOH B 20 220 220 HOH HOH . F 3 HOH B 21 221 5 HOH HOH . F 3 HOH B 22 222 221 HOH HOH . F 3 HOH B 23 223 2 HOH HOH . F 3 HOH B 24 224 222 HOH HOH . F 3 HOH B 25 225 224 HOH HOH . F 3 HOH B 26 226 225 HOH HOH . F 3 HOH B 27 227 227 HOH HOH . G 3 HOH C 1 301 18 HOH HOH . G 3 HOH C 2 302 303 HOH HOH . G 3 HOH C 3 303 305 HOH HOH . G 3 HOH C 4 304 302 HOH HOH . G 3 HOH C 5 305 306 HOH HOH . G 3 HOH C 6 306 316 HOH HOH . G 3 HOH C 7 307 312 HOH HOH . G 3 HOH C 8 308 309 HOH HOH . G 3 HOH C 9 309 314 HOH HOH . G 3 HOH C 10 310 308 HOH HOH . G 3 HOH C 11 311 311 HOH HOH . G 3 HOH C 12 312 313 HOH HOH . G 3 HOH C 13 313 321 HOH HOH . G 3 HOH C 14 314 310 HOH HOH . G 3 HOH C 15 315 323 HOH HOH . G 3 HOH C 16 316 344 HOH HOH . G 3 HOH C 17 317 336 HOH HOH . G 3 HOH C 18 318 317 HOH HOH . G 3 HOH C 19 319 320 HOH HOH . G 3 HOH C 20 320 322 HOH HOH . G 3 HOH C 21 321 318 HOH HOH . G 3 HOH C 22 322 325 HOH HOH . G 3 HOH C 23 323 330 HOH HOH . G 3 HOH C 24 324 329 HOH HOH . G 3 HOH C 25 325 326 HOH HOH . G 3 HOH C 26 326 335 HOH HOH . G 3 HOH C 27 327 327 HOH HOH . G 3 HOH C 28 328 7 HOH HOH . G 3 HOH C 29 329 338 HOH HOH . G 3 HOH C 30 330 332 HOH HOH . G 3 HOH C 31 331 22 HOH HOH . G 3 HOH C 32 332 19 HOH HOH . G 3 HOH C 33 333 328 HOH HOH . G 3 HOH C 34 334 352 HOH HOH . G 3 HOH C 35 335 337 HOH HOH . G 3 HOH C 36 336 333 HOH HOH . G 3 HOH C 37 337 339 HOH HOH . G 3 HOH C 38 338 348 HOH HOH . G 3 HOH C 39 339 347 HOH HOH . G 3 HOH C 40 340 341 HOH HOH . G 3 HOH C 41 341 356 HOH HOH . G 3 HOH C 42 342 20 HOH HOH . G 3 HOH C 43 343 342 HOH HOH . G 3 HOH C 44 344 354 HOH HOH . G 3 HOH C 45 345 353 HOH HOH . G 3 HOH C 46 346 370 HOH HOH . G 3 HOH C 47 347 369 HOH HOH . G 3 HOH C 48 348 340 HOH HOH . G 3 HOH C 49 349 358 HOH HOH . G 3 HOH C 50 350 363 HOH HOH . G 3 HOH C 51 351 362 HOH HOH . G 3 HOH C 52 352 365 HOH HOH . G 3 HOH C 53 353 357 HOH HOH . G 3 HOH C 54 354 359 HOH HOH . G 3 HOH C 55 355 364 HOH HOH . G 3 HOH C 56 356 360 HOH HOH . G 3 HOH C 57 357 368 HOH HOH . G 3 HOH C 58 358 371 HOH HOH . G 3 HOH C 59 359 366 HOH HOH . G 3 HOH C 60 360 367 HOH HOH . G 3 HOH C 61 361 372 HOH HOH . G 3 HOH C 62 362 21 HOH HOH . G 3 HOH C 63 363 373 HOH HOH . G 3 HOH C 64 364 374 HOH HOH . G 3 HOH C 65 365 6 HOH HOH . G 3 HOH C 66 366 249 HOH HOH . G 3 HOH C 67 367 9 HOH HOH . G 3 HOH C 68 368 375 HOH HOH . G 3 HOH C 69 369 378 HOH HOH . G 3 HOH C 70 370 8 HOH HOH . G 3 HOH C 71 371 383 HOH HOH . G 3 HOH C 72 372 379 HOH HOH . G 3 HOH C 73 373 381 HOH HOH . G 3 HOH C 74 374 382 HOH HOH . G 3 HOH C 75 375 380 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 -13.767 35.007 93.495 1 62.74 0 C1 EDO 201 C 1 HETATM 2 O O1 EDO . . . D 2 -12.835 35.911 92.887 1 58.23 0 O1 EDO 201 C 1 HETATM 3 C C2 EDO . . . D 2 -13.856 35.061 94.995 1 60.07 0 C2 EDO 201 C 1 HETATM 4 O O2 EDO . . . D 2 -14.777 34.116 95.551 1 58.96 0 O2 EDO 201 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #