data_8IAW # _model_server_result.job_id bHgVGX6ZzmmPbYHiTNI55g _model_server_result.datetime_utc '2024-11-08 06:12:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8iaw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 8IAW # _exptl.entry_id 8IAW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 168.042 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOENOLPYRUVATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IAW _cell.length_a 96.057 _cell.length_b 110.372 _cell.length_c 130.931 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IAW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 0 -110.375 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 270 A GLU 250 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.742 ? metalc ? metalc2 A OD1 ASP 294 A ASP 274 1_555 C MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? metalc ? metalc3 C MG MG . A MG 601 1_555 D O2' PEP . A PEP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc4 C MG MG . A MG 601 1_555 D O2 PEP . A PEP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc5 C MG MG . A MG 601 1_555 D O3P PEP . A PEP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc6 B OE1 GLU 270 B GLU 270 1_555 H MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.753 ? metalc ? metalc7 B OD1 ASP 294 B ASP 294 1_555 H MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.865 ? metalc ? metalc8 H MG MG . B MG 601 1_555 I O1P PEP . B PEP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc9 H MG MG . B MG 601 1_555 I O1 PEP . B PEP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc10 H MG MG . B MG 601 1_555 I O2 PEP . B PEP 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? # _chem_comp.formula 'C3 H5 O6 P' _chem_comp.formula_weight 168.042 _chem_comp.id PEP _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHOENOLPYRUVATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEP doub 237 n n C1 O2' PEP sing 238 n n C1 C2 PEP sing 239 n n O2' HO2 PEP sing 240 n n C2 C3 PEP doub 241 n n C2 O2 PEP sing 242 n n C3 H31 PEP sing 243 n n C3 H32 PEP sing 244 n n O2 P PEP sing 245 n n P O1P PEP doub 246 n n P O2P PEP sing 247 n n P O3P PEP sing 248 n n O2P HOP2 PEP sing 249 n n O3P HOP3 PEP sing 250 n n # _atom_sites.entry_id 8IAW _atom_sites.fract_transf_matrix[1][1] 0.01041 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00906 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007638 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 601 1 MG MG . D 3 PEP A 1 602 1 PEP PEP . E 4 SO4 A 1 603 2 SO4 SO4 . F 4 SO4 A 1 604 3 SO4 SO4 . G 4 SO4 A 1 605 4 SO4 SO4 . H 2 MG B 1 601 2 MG MG . I 3 PEP B 1 602 2 PEP PEP . J 4 SO4 B 1 603 1 SO4 SO4 . K 4 SO4 B 1 604 5 SO4 SO4 . L 4 SO4 B 1 605 6 SO4 SO4 . M 5 HOH A 1 701 7 HOH HOH . M 5 HOH A 2 702 1 HOH HOH . M 5 HOH A 3 703 5 HOH HOH . M 5 HOH A 4 704 4 HOH HOH . M 5 HOH A 5 705 6 HOH HOH . M 5 HOH A 6 706 3 HOH HOH . N 5 HOH B 1 701 23 HOH HOH . N 5 HOH B 2 702 19 HOH HOH . N 5 HOH B 3 703 21 HOH HOH . N 5 HOH B 4 704 9 HOH HOH . N 5 HOH B 5 705 14 HOH HOH . N 5 HOH B 6 706 22 HOH HOH . N 5 HOH B 7 707 17 HOH HOH . N 5 HOH B 8 708 13 HOH HOH . N 5 HOH B 9 709 12 HOH HOH . N 5 HOH B 10 710 20 HOH HOH . N 5 HOH B 11 711 8 HOH HOH . N 5 HOH B 12 712 16 HOH HOH . N 5 HOH B 13 713 11 HOH HOH . N 5 HOH B 14 714 10 HOH HOH . N 5 HOH B 15 715 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEP . . . D 3 -13.518 -45.979 -13.603 1 54.19 ? C1 PEP 602 A 1 HETATM 2 O O1 PEP . . . D 3 -12.534 -46.656 -13.956 1 51.93 ? O1 PEP 602 A 1 HETATM 3 O O2' PEP . . . D 3 -14.598 -46.445 -13.206 1 48.76 ? O2' PEP 602 A 1 HETATM 4 C C2 PEP . . . D 3 -13.474 -44.566 -13.641 1 56.53 ? C2 PEP 602 A 1 HETATM 5 C C3 PEP . . . D 3 -12.579 -43.693 -14.306 1 52.57 ? C3 PEP 602 A 1 HETATM 6 O O2 PEP . . . D 3 -14.472 -43.975 -12.884 1 63.94 ? O2 PEP 602 A 1 HETATM 7 P P PEP . . . D 3 -14.29 -43.502 -11.357 1 67.41 ? P PEP 602 A 1 HETATM 8 O O1P PEP . . . D 3 -14.555 -42.015 -11.269 1 72.94 ? O1P PEP 602 A 1 HETATM 9 O O2P PEP . . . D 3 -12.879 -43.787 -10.902 1 72.32 -1 O2P PEP 602 A 1 HETATM 10 O O3P PEP . . . D 3 -15.302 -44.282 -10.556 1 65.18 ? O3P PEP 602 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 10 #