data_8ID1 # _model_server_result.job_id HYILFqLi92aZPhfdm6RO9A _model_server_result.datetime_utc '2024-11-10 01:29:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8id1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 8ID1 # _exptl.entry_id 8ID1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 145.156 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S,4S)-1-methyl-4-oxidanyl-pyrrolidine-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8ID1 _cell.length_a 142.747 _cell.length_b 142.747 _cell.length_c 101.032 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8ID1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H11 N O3' _chem_comp.formula_weight 145.156 _chem_comp.id 6IW _chem_comp.mon_nstd_flag . _chem_comp.name '(2S,4S)-1-methyl-4-oxidanyl-pyrrolidine-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C09 N04 6IW sing 1 n n N04 C08 6IW sing 2 n n N04 C05 6IW sing 3 n n O02 C10 6IW doub 4 n n C08 C07 6IW sing 5 n n C10 O03 6IW sing 6 n n C10 C05 6IW sing 7 n n C05 C06 6IW sing 8 n n C07 C06 6IW sing 9 n n C07 O01 6IW sing 10 n n C05 H051 6IW sing 11 n n C06 H061 6IW sing 12 n n C06 H062 6IW sing 13 n n C07 H071 6IW sing 14 n n C08 H082 6IW sing 15 n n C08 H081 6IW sing 16 n n C09 H093 6IW sing 17 n n C09 H091 6IW sing 18 n n C09 H092 6IW sing 19 n n O01 H011 6IW sing 20 n n O03 H2 6IW sing 21 n n # _atom_sites.entry_id 8ID1 _atom_sites.fract_transf_matrix[1][1] 0.007005 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007005 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009898 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 6IW _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 801 _pdbx_nonpoly_scheme.auth_seq_num 801 _pdbx_nonpoly_scheme.pdb_mon_id 6IW _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 6IW . . . B 2 33.727 71.006 46.825 1 69.8 ? C10 6IW 801 A 1 HETATM 2 C C05 6IW . . . B 2 34.07 69.531 46.901 1 63.73 ? C05 6IW 801 A 1 HETATM 3 C C06 6IW . . . B 2 34.726 69.344 48.225 1 60.61 ? C06 6IW 801 A 1 HETATM 4 C C07 6IW . . . B 2 34.852 67.883 48.116 1 57.68 ? C07 6IW 801 A 1 HETATM 5 C C08 6IW . . . B 2 35.459 67.784 47.024 1 61.86 ? C08 6IW 801 A 1 HETATM 6 C C09 6IW . . . B 2 34.716 68.755 45.012 1 71.41 ? C09 6IW 801 A 1 HETATM 7 N N04 6IW . . . B 2 35.11 69.158 46.294 1 68.5 ? N04 6IW 801 A 1 HETATM 8 O O01 6IW . . . B 2 35.751 67.818 49.171 1 63.1 ? O01 6IW 801 A 1 HETATM 9 O O02 6IW . . . B 2 32.918 71.488 46.078 1 66.36 ? O02 6IW 801 A 1 HETATM 10 O O03 6IW . . . B 2 34.19 71.827 47.555 1 82.13 -1 O03 6IW 801 A 1 HETATM 11 H H051 6IW . . . B 2 33.313 68.939 46.771 1 76.48 ? H051 6IW 801 A 1 HETATM 12 H H061 6IW . . . B 2 34.144 69.602 48.957 1 72.73 ? H061 6IW 801 A 1 HETATM 13 H H062 6IW . . . B 2 35.592 69.779 48.265 1 72.73 ? H062 6IW 801 A 1 HETATM 14 H H071 6IW . . . B 2 34.025 67.386 48.209 1 69.22 ? H071 6IW 801 A 1 HETATM 15 H H082 6IW . . . B 2 35.123 67.031 46.513 1 74.23 ? H082 6IW 801 A 1 HETATM 16 H H081 6IW . . . B 2 36.415 67.709 47.169 1 74.23 ? H081 6IW 801 A 1 HETATM 17 H H093 6IW . . . B 2 33.785 68.481 45.031 1 85.69 ? H093 6IW 801 A 1 HETATM 18 H H091 6IW . . . B 2 35.266 68.01 44.724 1 85.69 ? H091 6IW 801 A 1 HETATM 19 H H092 6IW . . . B 2 34.822 69.494 44.392 1 85.69 ? H092 6IW 801 A 1 HETATM 20 H H011 6IW . . . B 2 35.497 67.223 49.723 1 75.72 ? H011 6IW 801 A 1 # _model_server_stats.io_time_ms 91 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #