data_8IDH # _model_server_result.job_id tKe8bypgTeQI9y6JpZnNsw _model_server_result.datetime_utc '2024-10-19 03:46:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8idh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8IDH # _exptl.entry_id 8IDH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 321.352 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-[2-fluoranyl-3-(1,3,5-trimethylpyrazol-4-yl)phenyl]-1~{H}-imidazo[4,5-b]pyridine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IDH _cell.length_a 52.591 _cell.length_b 71.929 _cell.length_c 32.044 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IDH _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 7 A LYS 355 1_555 A N CME 8 A CME 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C CME 8 A CME 356 1_555 A N CYS 9 A CYS 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C TYR 42 A TYR 390 1_555 A N CME 43 A CME 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C CME 43 A CME 391 1_555 A N ASP 44 A ASP 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C18 H16 F N5' _chem_comp.formula_weight 321.352 _chem_comp.id OWO _chem_comp.mon_nstd_flag . _chem_comp.name 7-[2-fluoranyl-3-(1,3,5-trimethylpyrazol-4-yl)phenyl]-1~{H}-imidazo[4,5-b]pyridine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 N23 OWO sing 258 n n N22 N23 OWO sing 259 n y N22 C20 OWO doub 260 n y N23 C02 OWO sing 261 n y C20 C21 OWO sing 262 n n C20 C03 OWO sing 263 n y C02 C03 OWO doub 264 n y C02 C01 OWO sing 265 n n C03 C04 OWO sing 266 n n F19 C18 OWO sing 267 n n C04 C05 OWO doub 268 n y C04 C18 OWO sing 269 n y C05 C06 OWO sing 270 n y C18 C08 OWO doub 271 n y N11 C12 OWO sing 272 n y N11 C10 OWO sing 273 n y C12 N13 OWO doub 274 n y C06 C07 OWO doub 275 n y C08 C07 OWO sing 276 n y C08 C09 OWO sing 277 n n C10 C09 OWO doub 278 n y C10 C14 OWO sing 279 n y N13 C14 OWO sing 280 n y C09 C17 OWO sing 281 n y C14 N15 OWO doub 282 n y C17 C16 OWO doub 283 n y N15 C16 OWO sing 284 n y C17 H171 OWO sing 285 n n C21 H211 OWO sing 286 n n C21 H213 OWO sing 287 n n C21 H212 OWO sing 288 n n C24 H241 OWO sing 289 n n C24 H242 OWO sing 290 n n C24 H243 OWO sing 291 n n C01 H013 OWO sing 292 n n C01 H011 OWO sing 293 n n C01 H012 OWO sing 294 n n C05 H051 OWO sing 295 n n C06 H061 OWO sing 296 n n C07 H071 OWO sing 297 n n C12 H121 OWO sing 298 n n C16 H161 OWO sing 299 n n N11 H111 OWO sing 300 n n # _atom_sites.entry_id 8IDH _atom_sites.fract_transf_matrix[1][1] 0.019015 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031207 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OWO A 1 501 501 OWO LIG . C 3 HOH A 1 601 40 HOH HOH . C 3 HOH A 2 602 22 HOH HOH . C 3 HOH A 3 603 60 HOH HOH . C 3 HOH A 4 604 18 HOH HOH . C 3 HOH A 5 605 87 HOH HOH . C 3 HOH A 6 606 73 HOH HOH . C 3 HOH A 7 607 81 HOH HOH . C 3 HOH A 8 608 34 HOH HOH . C 3 HOH A 9 609 71 HOH HOH . C 3 HOH A 10 610 59 HOH HOH . C 3 HOH A 11 611 3 HOH HOH . C 3 HOH A 12 612 70 HOH HOH . C 3 HOH A 13 613 49 HOH HOH . C 3 HOH A 14 614 2 HOH HOH . C 3 HOH A 15 615 11 HOH HOH . C 3 HOH A 16 616 10 HOH HOH . C 3 HOH A 17 617 37 HOH HOH . C 3 HOH A 18 618 44 HOH HOH . C 3 HOH A 19 619 12 HOH HOH . C 3 HOH A 20 620 29 HOH HOH . C 3 HOH A 21 621 69 HOH HOH . C 3 HOH A 22 622 21 HOH HOH . C 3 HOH A 23 623 64 HOH HOH . C 3 HOH A 24 624 33 HOH HOH . C 3 HOH A 25 625 32 HOH HOH . C 3 HOH A 26 626 35 HOH HOH . C 3 HOH A 27 627 36 HOH HOH . C 3 HOH A 28 628 4 HOH HOH . C 3 HOH A 29 629 20 HOH HOH . C 3 HOH A 30 630 58 HOH HOH . C 3 HOH A 31 631 23 HOH HOH . C 3 HOH A 32 632 39 HOH HOH . C 3 HOH A 33 633 82 HOH HOH . C 3 HOH A 34 634 54 HOH HOH . C 3 HOH A 35 635 9 HOH HOH . C 3 HOH A 36 636 42 HOH HOH . C 3 HOH A 37 637 67 HOH HOH . C 3 HOH A 38 638 88 HOH HOH . C 3 HOH A 39 639 25 HOH HOH . C 3 HOH A 40 640 5 HOH HOH . C 3 HOH A 41 641 72 HOH HOH . C 3 HOH A 42 642 41 HOH HOH . C 3 HOH A 43 643 56 HOH HOH . C 3 HOH A 44 644 52 HOH HOH . C 3 HOH A 45 645 8 HOH HOH . C 3 HOH A 46 646 16 HOH HOH . C 3 HOH A 47 647 14 HOH HOH . C 3 HOH A 48 648 6 HOH HOH . C 3 HOH A 49 649 17 HOH HOH . C 3 HOH A 50 650 83 HOH HOH . C 3 HOH A 51 651 13 HOH HOH . C 3 HOH A 52 652 76 HOH HOH . C 3 HOH A 53 653 19 HOH HOH . C 3 HOH A 54 654 27 HOH HOH . C 3 HOH A 55 655 45 HOH HOH . C 3 HOH A 56 656 28 HOH HOH . C 3 HOH A 57 657 38 HOH HOH . C 3 HOH A 58 658 78 HOH HOH . C 3 HOH A 59 659 63 HOH HOH . C 3 HOH A 60 660 43 HOH HOH . C 3 HOH A 61 661 57 HOH HOH . C 3 HOH A 62 662 7 HOH HOH . C 3 HOH A 63 663 30 HOH HOH . C 3 HOH A 64 664 66 HOH HOH . C 3 HOH A 65 665 15 HOH HOH . C 3 HOH A 66 666 91 HOH HOH . C 3 HOH A 67 667 47 HOH HOH . C 3 HOH A 68 668 24 HOH HOH . C 3 HOH A 69 669 55 HOH HOH . C 3 HOH A 70 670 51 HOH HOH . C 3 HOH A 71 671 61 HOH HOH . C 3 HOH A 72 672 90 HOH HOH . C 3 HOH A 73 673 85 HOH HOH . C 3 HOH A 74 674 1 HOH HOH . C 3 HOH A 75 675 65 HOH HOH . C 3 HOH A 76 676 74 HOH HOH . C 3 HOH A 77 677 77 HOH HOH . C 3 HOH A 78 678 75 HOH HOH . C 3 HOH A 79 679 46 HOH HOH . C 3 HOH A 80 680 48 HOH HOH . C 3 HOH A 81 681 53 HOH HOH . C 3 HOH A 82 682 86 HOH HOH . C 3 HOH A 83 683 68 HOH HOH . C 3 HOH A 84 684 50 HOH HOH . C 3 HOH A 85 685 26 HOH HOH . C 3 HOH A 86 686 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OWO . . . B 2 16.663 -5.84 7.268 1 20.26 ? C10 OWO 501 A 1 HETATM 2 C C17 OWO . . . B 2 16.492 -3.666 6.2 1 12.09 ? C17 OWO 501 A 1 HETATM 3 C C20 OWO . . . B 2 20.834 -4.375 12.231 1 26.51 ? C20 OWO 501 A 1 HETATM 4 C C21 OWO . . . B 2 22.15 -4.824 11.595 1 31.8 ? C21 OWO 501 A 1 HETATM 5 C C24 OWO . . . B 2 18.57 -3.716 14.949 1 32.02 ? C24 OWO 501 A 1 HETATM 6 C C01 OWO . . . B 2 17.341 -3.095 12.296 1 22.78 ? C01 OWO 501 A 1 HETATM 7 C C02 OWO . . . B 2 18.754 -3.627 12.508 1 23.27 ? C02 OWO 501 A 1 HETATM 8 C C03 OWO . . . B 2 19.703 -3.937 11.545 1 21.49 ? C03 OWO 501 A 1 HETATM 9 C C04 OWO . . . B 2 19.533 -3.742 10.031 1 18.14 ? C04 OWO 501 A 1 HETATM 10 C C05 OWO . . . B 2 20.468 -2.978 9.38 1 18.99 ? C05 OWO 501 A 1 HETATM 11 C C06 OWO . . . B 2 20.358 -2.721 8.022 1 16.14 ? C06 OWO 501 A 1 HETATM 12 C C07 OWO . . . B 2 19.294 -3.21 7.294 1 21.75 ? C07 OWO 501 A 1 HETATM 13 C C08 OWO . . . B 2 18.345 -3.999 7.923 1 16.46 ? C08 OWO 501 A 1 HETATM 14 C C09 OWO . . . B 2 17.155 -4.514 7.106 1 18.3 ? C09 OWO 501 A 1 HETATM 15 C C12 OWO . . . B 2 16.254 -7.912 7.795 1 19.49 ? C12 OWO 501 A 1 HETATM 16 C C14 OWO . . . B 2 15.596 -6.24 6.535 1 14.66 ? C14 OWO 501 A 1 HETATM 17 C C16 OWO . . . B 2 15.4 -4.145 5.493 1 20.29 ? C16 OWO 501 A 1 HETATM 18 C C18 OWO . . . B 2 18.455 -4.239 9.303 1 17.35 ? C18 OWO 501 A 1 HETATM 19 F F19 OWO . . . B 2 17.521 -4.981 9.963 1 40.49 ? F19 OWO 501 A 1 HETATM 20 N N11 OWO . . . B 2 17.073 -6.882 8.035 1 16.57 ? N11 OWO 501 A 1 HETATM 21 N N13 OWO . . . B 2 15.353 -7.531 6.879 1 19.51 ? N13 OWO 501 A 1 HETATM 22 N N15 OWO . . . B 2 14.974 -5.385 5.679 1 18.33 ? N15 OWO 501 A 1 HETATM 23 N N22 OWO . . . B 2 20.55 -4.362 13.547 1 26.57 ? N22 OWO 501 A 1 HETATM 24 N N23 OWO . . . B 2 19.267 -3.895 13.682 1 26.91 ? N23 OWO 501 A 1 HETATM 25 H H171 OWO . . . B 2 16.831 -2.648 6.057 1 14.58 ? H171 OWO 501 A 1 HETATM 26 H H211 OWO . . . B 2 22.746 -5.353 12.332 1 38.24 ? H211 OWO 501 A 1 HETATM 27 H H213 OWO . . . B 2 22.697 -3.955 11.243 1 38.24 ? H213 OWO 501 A 1 HETATM 28 H H212 OWO . . . B 2 21.94 -5.484 10.758 1 38.24 ? H212 OWO 501 A 1 HETATM 29 H H241 OWO . . . B 2 17.629 -4.258 14.924 1 38.5 ? H241 OWO 501 A 1 HETATM 30 H H242 OWO . . . B 2 18.375 -2.658 15.108 1 38.5 ? H242 OWO 501 A 1 HETATM 31 H H243 OWO . . . B 2 19.187 -4.097 15.759 1 38.5 ? H243 OWO 501 A 1 HETATM 32 H H013 OWO . . . B 2 16.621 -3.853 12.592 1 27.41 ? H013 OWO 501 A 1 HETATM 33 H H011 OWO . . . B 2 17.2 -2.851 11.248 1 27.41 ? H011 OWO 501 A 1 HETATM 34 H H012 OWO . . . B 2 17.196 -2.203 12.899 1 27.41 ? H012 OWO 501 A 1 HETATM 35 H H051 OWO . . . B 2 21.304 -2.569 9.935 1 22.86 ? H051 OWO 501 A 1 HETATM 36 H H061 OWO . . . B 2 21.117 -2.129 7.527 1 19.44 ? H061 OWO 501 A 1 HETATM 37 H H071 OWO . . . B 2 19.201 -2.979 6.239 1 26.17 ? H071 OWO 501 A 1 HETATM 38 H H121 OWO . . . B 2 16.309 -8.888 8.262 1 23.46 ? H121 OWO 501 A 1 HETATM 39 H H161 OWO . . . B 2 14.893 -3.502 4.785 1 24.43 ? H161 OWO 501 A 1 HETATM 40 H H111 OWO . . . B 2 17.85 -6.881 8.668 1 19.95 ? H111 OWO 501 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 40 #