data_8IED
#
_model_server_result.job_id            nXcWGqv0q1lSL-mOzfbVhw 
_model_server_result.datetime_utc      '2024-10-19 11:52:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ied 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":601}' 
#
_entry.id    8IED 
#
_exptl.entry_id    8IED 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2R)-3-[(E)-hexadec-9-enoyl]oxy-2-octadecanoyloxy-propyl] 2-(trimethylazaniumyl)ethyl phosphate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8IED 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8IED 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 G N N 
? 6 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 191 A CYS 191 1_555 A SG CYS 216 A CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 B SG CYS 191 B CYS 191 1_555 B SG CYS 216 B CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 E SG CYS 159 N CYS 147 1_555 E SG CYS 229 N CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                A1LYA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2R)-3-[(E)-hexadec-9-enoyl]oxy-2-octadecanoyloxy-propyl] 2-(trimethylazaniumyl)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 N A1LYA sing 1 n n 
O22 C21 A1LYA doub 2 n n 
C14 N A1LYA sing 3 n n 
N C15 A1LYA sing 4 n n 
N C12 A1LYA sing 5 n n 
C21 C22 A1LYA sing 6 n n 
C21 O21 A1LYA sing 7 n n 
C11 C12 A1LYA sing 8 n n 
C11 O13 A1LYA sing 9 n n 
C22 C23 A1LYA sing 10 n n 
C2 C3 A1LYA sing 11 n n 
C2 O21 A1LYA sing 12 n n 
C2 C1 A1LYA sing 13 n n 
C3 O31 A1LYA sing 14 n n 
C23 C24 A1LYA sing 15 n n 
O11 C1 A1LYA sing 16 n n 
O11 P A1LYA sing 17 n n 
O13 P A1LYA sing 18 n n 
O31 C31 A1LYA sing 19 n n 
P O14 A1LYA doub 20 n n 
P O12 A1LYA sing 21 n n 
C24 C25 A1LYA sing 22 n n 
C25 C26 A1LYA sing 23 n n 
C31 O32 A1LYA doub 24 n n 
C31 C32 A1LYA sing 25 n n 
C26 C27 A1LYA sing 26 n n 
C32 C33 A1LYA sing 27 n n 
C27 C28 A1LYA sing 28 n n 
C33 C34 A1LYA sing 29 n n 
C34 C35 A1LYA sing 30 n n 
C28 C29 A1LYA sing 31 n n 
C35 C36 A1LYA sing 32 n n 
C29 C2A A1LYA sing 33 n n 
C36 C37 A1LYA sing 34 n n 
C2A C2B A1LYA sing 35 n n 
C37 C38 A1LYA sing 36 n n 
C2C C2B A1LYA sing 37 n n 
C2C C2D A1LYA sing 38 n n 
C38 C39 A1LYA sing 39 n n 
C2D C2E A1LYA sing 40 n n 
C2F C2E A1LYA sing 41 n n 
C2F C2G A1LYA sing 42 n n 
C39 C3A A1LYA doub 43 e n 
C2G C2H A1LYA sing 44 n n 
C3A C3B A1LYA sing 45 n n 
C3B C3C A1LYA sing 46 n n 
C3C C3D A1LYA sing 47 n n 
C2H C2I A1LYA sing 48 n n 
C3E C3D A1LYA sing 49 n n 
C3E C3F A1LYA sing 50 n n 
C3G C3F A1LYA sing 51 n n 
C11 H2 A1LYA sing 52 n n 
C11 H3 A1LYA sing 53 n n 
C12 H4 A1LYA sing 54 n n 
C12 H5 A1LYA sing 55 n n 
C13 H6 A1LYA sing 56 n n 
C13 H7 A1LYA sing 57 n n 
C13 H8 A1LYA sing 58 n n 
C14 H9 A1LYA sing 59 n n 
C14 H10 A1LYA sing 60 n n 
C14 H11 A1LYA sing 61 n n 
C15 H12 A1LYA sing 62 n n 
C15 H13 A1LYA sing 63 n n 
C15 H14 A1LYA sing 64 n n 
C1 H15 A1LYA sing 65 n n 
C1 H16 A1LYA sing 66 n n 
C2 H17 A1LYA sing 67 n n 
C22 H18 A1LYA sing 68 n n 
C22 H19 A1LYA sing 69 n n 
C23 H20 A1LYA sing 70 n n 
C23 H21 A1LYA sing 71 n n 
C24 H22 A1LYA sing 72 n n 
C24 H23 A1LYA sing 73 n n 
C25 H24 A1LYA sing 74 n n 
C25 H25 A1LYA sing 75 n n 
C26 H26 A1LYA sing 76 n n 
C26 H27 A1LYA sing 77 n n 
C27 H28 A1LYA sing 78 n n 
C27 H29 A1LYA sing 79 n n 
C28 H30 A1LYA sing 80 n n 
C28 H31 A1LYA sing 81 n n 
C29 H32 A1LYA sing 82 n n 
C29 H33 A1LYA sing 83 n n 
C2A H34 A1LYA sing 84 n n 
C2A H35 A1LYA sing 85 n n 
C2B H36 A1LYA sing 86 n n 
C2B H37 A1LYA sing 87 n n 
C2C H38 A1LYA sing 88 n n 
C2C H39 A1LYA sing 89 n n 
C2D H40 A1LYA sing 90 n n 
C2D H41 A1LYA sing 91 n n 
C2E H42 A1LYA sing 92 n n 
C2E H43 A1LYA sing 93 n n 
C2F H44 A1LYA sing 94 n n 
C2F H45 A1LYA sing 95 n n 
C2G H46 A1LYA sing 96 n n 
C2G H47 A1LYA sing 97 n n 
C2H H48 A1LYA sing 98 n n 
C2H H49 A1LYA sing 99 n n 
C2I H50 A1LYA sing 100 n n 
C2I H51 A1LYA sing 101 n n 
C2I H52 A1LYA sing 102 n n 
C3 H53 A1LYA sing 103 n n 
C3 H54 A1LYA sing 104 n n 
C32 H55 A1LYA sing 105 n n 
C32 H56 A1LYA sing 106 n n 
C33 H57 A1LYA sing 107 n n 
C33 H58 A1LYA sing 108 n n 
C34 H59 A1LYA sing 109 n n 
C34 H60 A1LYA sing 110 n n 
C35 H61 A1LYA sing 111 n n 
C35 H62 A1LYA sing 112 n n 
C36 H63 A1LYA sing 113 n n 
C36 H64 A1LYA sing 114 n n 
C37 H65 A1LYA sing 115 n n 
C37 H66 A1LYA sing 116 n n 
C38 H67 A1LYA sing 117 n n 
C38 H68 A1LYA sing 118 n n 
C39 H69 A1LYA sing 119 n n 
C3A H70 A1LYA sing 120 n n 
C3B H71 A1LYA sing 121 n n 
C3B H72 A1LYA sing 122 n n 
C3C H73 A1LYA sing 123 n n 
C3C H74 A1LYA sing 124 n n 
C3D H75 A1LYA sing 125 n n 
C3D H76 A1LYA sing 126 n n 
C3E H77 A1LYA sing 127 n n 
C3E H78 A1LYA sing 128 n n 
C3F H79 A1LYA sing 129 n n 
C3F H80 A1LYA sing 130 n n 
C3G H81 A1LYA sing 131 n n 
C3G H82 A1LYA sing 132 n n 
C3G H83 A1LYA sing 133 n n 
#
_atom_sites.entry_id                     8IED 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 6 A1LYA A 1 601 401 A1LYA PC1 . 
H 6 A1LYA B 1 601 401 A1LYA PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 A1LYA . . . H 6 179.38 173.19 122.01 1 79.1 ? O12 A1LYA 601 B 1 
HETATM 2 P P A1LYA . . . H 6 180.321 172.125 121.492 1 85.11 ? P A1LYA 601 B 1 
HETATM 3 O O14 A1LYA . . . H 6 179.55 170.855 121.293 1 74.29 ? O14 A1LYA 601 B 1 
HETATM 4 O O13 A1LYA . . . H 6 181.025 172.634 120.05 1 70.01 ? O13 A1LYA 601 B 1 
HETATM 5 C C11 A1LYA . . . H 6 181.994 171.794 119.423 1 68.58 ? C11 A1LYA 601 B 1 
HETATM 6 C C12 A1LYA . . . H 6 181.232 170.752 118.543 1 73.06 ? C12 A1LYA 601 B 1 
HETATM 7 N N A1LYA . . . H 6 181.888 169.418 118.535 1 79.87 ? N A1LYA 601 B 1 
HETATM 8 C C13 A1LYA . . . H 6 183.074 169.469 117.712 1 79.25 ? C13 A1LYA 601 B 1 
HETATM 9 C C14 A1LYA . . . H 6 182.249 169.002 119.893 1 70.97 ? C14 A1LYA 601 B 1 
HETATM 10 C C15 A1LYA . . . H 6 180.959 168.437 117.972 1 76.62 ? C15 A1LYA 601 B 1 
HETATM 11 O O11 A1LYA . . . H 6 181.523 171.853 122.624 1 79.17 ? O11 A1LYA 601 B 1 
HETATM 12 C C1 A1LYA . . . H 6 181.106 171.574 123.959 1 74.14 ? C1 A1LYA 601 B 1 
HETATM 13 C C2 A1LYA . . . H 6 182.074 172.326 124.908 1 74.27 ? C2 A1LYA 601 B 1 
HETATM 14 O O21 A1LYA . . . H 6 181.337 172.68 126.02 1 74.28 ? O21 A1LYA 601 B 1 
HETATM 15 C C21 A1LYA . . . H 6 181.784 172.148 127.208 1 70.87 ? C21 A1LYA 601 B 1 
HETATM 16 O O22 A1LYA . . . H 6 182.633 171.316 127.23 1 71.31 ? O22 A1LYA 601 B 1 
HETATM 17 C C22 A1LYA . . . H 6 181.155 172.635 128.491 1 69.19 ? C22 A1LYA 601 B 1 
HETATM 18 C C23 A1LYA . . . H 6 181.531 171.803 129.704 1 74.19 ? C23 A1LYA 601 B 1 
HETATM 19 C C24 A1LYA . . . H 6 180.506 172.057 130.83 1 72.71 ? C24 A1LYA 601 B 1 
HETATM 20 C C25 A1LYA . . . H 6 180.549 173.548 131.269 1 69.5 ? C25 A1LYA 601 B 1 
HETATM 21 C C26 A1LYA . . . H 6 179.155 174.064 131.758 1 70.72 ? C26 A1LYA 601 B 1 
HETATM 22 C C27 A1LYA . . . H 6 178.867 175.511 131.249 1 77.01 ? C27 A1LYA 601 B 1 
HETATM 23 C C28 A1LYA . . . H 6 177.909 176.274 132.214 1 75.75 ? C28 A1LYA 601 B 1 
HETATM 24 C C29 A1LYA . . . H 6 176.504 176.444 131.563 1 70.69 ? C29 A1LYA 601 B 1 
HETATM 25 C C2A A1LYA . . . H 6 175.667 177.583 132.203 1 73.92 ? C2A A1LYA 601 B 1 
HETATM 26 C C2B A1LYA . . . H 6 175.452 177.346 133.715 1 72.31 ? C2B A1LYA 601 B 1 
HETATM 27 C C2C A1LYA . . . H 6 174.344 176.285 133.956 1 75.79 ? C2C A1LYA 601 B 1 
HETATM 28 C C2D A1LYA . . . H 6 172.925 176.887 133.784 1 76.06 ? C2D A1LYA 601 B 1 
HETATM 29 C C2E A1LYA . . . H 6 172.068 176.048 132.791 1 76.34 ? C2E A1LYA 601 B 1 
HETATM 30 C C2F A1LYA . . . H 6 171.468 174.795 133.467 1 74.04 ? C2F A1LYA 601 B 1 
HETATM 31 C C2G A1LYA . . . H 6 169.943 174.704 133.247 1 74.75 ? C2G A1LYA 601 B 1 
HETATM 32 C C2H A1LYA . . . H 6 169.458 173.257 133.077 1 76.12 ? C2H A1LYA 601 B 1 
HETATM 33 C C2I A1LYA . . . H 6 168.179 173.178 132.239 1 72.06 ? C2I A1LYA 601 B 1 
HETATM 34 C C3 A1LYA . . . H 6 182.618 173.627 124.257 1 73.83 ? C3 A1LYA 601 B 1 
HETATM 35 O O31 A1LYA . . . H 6 182.105 174.746 124.962 1 79.1 ? O31 A1LYA 601 B 1 
HETATM 36 C C31 A1LYA . . . H 6 181.198 175.534 124.194 1 77.74 ? C31 A1LYA 601 B 1 
HETATM 37 O O32 A1LYA . . . H 6 181.05 175.316 123.033 1 74.81 ? O32 A1LYA 601 B 1 
HETATM 38 C C32 A1LYA . . . H 6 180.43 176.689 124.868 1 76.78 ? C32 A1LYA 601 B 1 
HETATM 39 C C33 A1LYA . . . H 6 178.923 176.388 125.036 1 77.92 ? C33 A1LYA 601 B 1 
HETATM 40 C C34 A1LYA . . . H 6 178.189 177.567 125.706 1 74.65 ? C34 A1LYA 601 B 1 
HETATM 41 C C35 A1LYA . . . H 6 177.009 177.112 126.579 1 74.98 ? C35 A1LYA 601 B 1 
HETATM 42 C C36 A1LYA . . . H 6 175.953 178.224 126.727 1 75.3 ? C36 A1LYA 601 B 1 
HETATM 43 C C37 A1LYA . . . H 6 175.229 178.179 128.075 1 75.78 ? C37 A1LYA 601 B 1 
HETATM 44 C C38 A1LYA . . . H 6 173.856 178.863 127.98 1 72.68 ? C38 A1LYA 601 B 1 
HETATM 45 C C39 A1LYA . . . H 6 173.214 179.01 129.364 1 74.43 ? C39 A1LYA 601 B 1 
HETATM 46 C C3A A1LYA . . . H 6 172.196 179.839 129.502 1 74.93 ? C3A A1LYA 601 B 1 
HETATM 47 C C3B A1LYA . . . H 6 171.51 180.028 130.866 1 77.61 ? C3B A1LYA 601 B 1 
HETATM 48 C C3C A1LYA . . . H 6 172.07 181.298 131.547 1 76.5 ? C3C A1LYA 601 B 1 
HETATM 49 C C3D A1LYA . . . H 6 170.961 182.121 132.256 1 74.57 ? C3D A1LYA 601 B 1 
HETATM 50 C C3E A1LYA . . . H 6 171.288 182.4 133.745 1 73.76 ? C3E A1LYA 601 B 1 
HETATM 51 C C3F A1LYA . . . H 6 170.1 183.06 134.487 1 75.71 ? C3F A1LYA 601 B 1 
HETATM 52 C C3G A1LYA . . . H 6 170.121 182.791 135.999 1 75.49 ? C3G A1LYA 601 B 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           52 
#