data_8IEI
#
_model_server_result.job_id            D1mqs3k4_YBLN8UxTERTEw 
_model_server_result.datetime_utc      '2024-10-19 08:21:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8iei 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    8IEI 
#
_exptl.entry_id    8IEI 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2R)-3-[(E)-hexadec-9-enoyl]oxy-2-octadecanoyloxy-propyl] 2-(trimethylazaniumyl)ethyl phosphate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8IEI 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8IEI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 191 A CYS 191 1_555 A SG CYS 216 A CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 B SG CYS 191 B CYS 191 1_555 B SG CYS 216 B CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                A1LYA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2R)-3-[(E)-hexadec-9-enoyl]oxy-2-octadecanoyloxy-propyl] 2-(trimethylazaniumyl)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 N A1LYA sing 1 n n 
O22 C21 A1LYA doub 2 n n 
C14 N A1LYA sing 3 n n 
N C15 A1LYA sing 4 n n 
N C12 A1LYA sing 5 n n 
C21 C22 A1LYA sing 6 n n 
C21 O21 A1LYA sing 7 n n 
C11 C12 A1LYA sing 8 n n 
C11 O13 A1LYA sing 9 n n 
C22 C23 A1LYA sing 10 n n 
C2 C3 A1LYA sing 11 n n 
C2 O21 A1LYA sing 12 n n 
C2 C1 A1LYA sing 13 n n 
C3 O31 A1LYA sing 14 n n 
C23 C24 A1LYA sing 15 n n 
O11 C1 A1LYA sing 16 n n 
O11 P A1LYA sing 17 n n 
O13 P A1LYA sing 18 n n 
O31 C31 A1LYA sing 19 n n 
P O14 A1LYA doub 20 n n 
P O12 A1LYA sing 21 n n 
C24 C25 A1LYA sing 22 n n 
C25 C26 A1LYA sing 23 n n 
C31 O32 A1LYA doub 24 n n 
C31 C32 A1LYA sing 25 n n 
C26 C27 A1LYA sing 26 n n 
C32 C33 A1LYA sing 27 n n 
C27 C28 A1LYA sing 28 n n 
C33 C34 A1LYA sing 29 n n 
C34 C35 A1LYA sing 30 n n 
C28 C29 A1LYA sing 31 n n 
C35 C36 A1LYA sing 32 n n 
C29 C2A A1LYA sing 33 n n 
C36 C37 A1LYA sing 34 n n 
C2A C2B A1LYA sing 35 n n 
C37 C38 A1LYA sing 36 n n 
C2C C2B A1LYA sing 37 n n 
C2C C2D A1LYA sing 38 n n 
C38 C39 A1LYA sing 39 n n 
C2D C2E A1LYA sing 40 n n 
C2F C2E A1LYA sing 41 n n 
C2F C2G A1LYA sing 42 n n 
C39 C3A A1LYA doub 43 e n 
C2G C2H A1LYA sing 44 n n 
C3A C3B A1LYA sing 45 n n 
C3B C3C A1LYA sing 46 n n 
C3C C3D A1LYA sing 47 n n 
C2H C2I A1LYA sing 48 n n 
C3E C3D A1LYA sing 49 n n 
C3E C3F A1LYA sing 50 n n 
C3G C3F A1LYA sing 51 n n 
C11 H2 A1LYA sing 52 n n 
C11 H3 A1LYA sing 53 n n 
C12 H4 A1LYA sing 54 n n 
C12 H5 A1LYA sing 55 n n 
C13 H6 A1LYA sing 56 n n 
C13 H7 A1LYA sing 57 n n 
C13 H8 A1LYA sing 58 n n 
C14 H9 A1LYA sing 59 n n 
C14 H10 A1LYA sing 60 n n 
C14 H11 A1LYA sing 61 n n 
C15 H12 A1LYA sing 62 n n 
C15 H13 A1LYA sing 63 n n 
C15 H14 A1LYA sing 64 n n 
C1 H15 A1LYA sing 65 n n 
C1 H16 A1LYA sing 66 n n 
C2 H17 A1LYA sing 67 n n 
C22 H18 A1LYA sing 68 n n 
C22 H19 A1LYA sing 69 n n 
C23 H20 A1LYA sing 70 n n 
C23 H21 A1LYA sing 71 n n 
C24 H22 A1LYA sing 72 n n 
C24 H23 A1LYA sing 73 n n 
C25 H24 A1LYA sing 74 n n 
C25 H25 A1LYA sing 75 n n 
C26 H26 A1LYA sing 76 n n 
C26 H27 A1LYA sing 77 n n 
C27 H28 A1LYA sing 78 n n 
C27 H29 A1LYA sing 79 n n 
C28 H30 A1LYA sing 80 n n 
C28 H31 A1LYA sing 81 n n 
C29 H32 A1LYA sing 82 n n 
C29 H33 A1LYA sing 83 n n 
C2A H34 A1LYA sing 84 n n 
C2A H35 A1LYA sing 85 n n 
C2B H36 A1LYA sing 86 n n 
C2B H37 A1LYA sing 87 n n 
C2C H38 A1LYA sing 88 n n 
C2C H39 A1LYA sing 89 n n 
C2D H40 A1LYA sing 90 n n 
C2D H41 A1LYA sing 91 n n 
C2E H42 A1LYA sing 92 n n 
C2E H43 A1LYA sing 93 n n 
C2F H44 A1LYA sing 94 n n 
C2F H45 A1LYA sing 95 n n 
C2G H46 A1LYA sing 96 n n 
C2G H47 A1LYA sing 97 n n 
C2H H48 A1LYA sing 98 n n 
C2H H49 A1LYA sing 99 n n 
C2I H50 A1LYA sing 100 n n 
C2I H51 A1LYA sing 101 n n 
C2I H52 A1LYA sing 102 n n 
C3 H53 A1LYA sing 103 n n 
C3 H54 A1LYA sing 104 n n 
C32 H55 A1LYA sing 105 n n 
C32 H56 A1LYA sing 106 n n 
C33 H57 A1LYA sing 107 n n 
C33 H58 A1LYA sing 108 n n 
C34 H59 A1LYA sing 109 n n 
C34 H60 A1LYA sing 110 n n 
C35 H61 A1LYA sing 111 n n 
C35 H62 A1LYA sing 112 n n 
C36 H63 A1LYA sing 113 n n 
C36 H64 A1LYA sing 114 n n 
C37 H65 A1LYA sing 115 n n 
C37 H66 A1LYA sing 116 n n 
C38 H67 A1LYA sing 117 n n 
C38 H68 A1LYA sing 118 n n 
C39 H69 A1LYA sing 119 n n 
C3A H70 A1LYA sing 120 n n 
C3B H71 A1LYA sing 121 n n 
C3B H72 A1LYA sing 122 n n 
C3C H73 A1LYA sing 123 n n 
C3C H74 A1LYA sing 124 n n 
C3D H75 A1LYA sing 125 n n 
C3D H76 A1LYA sing 126 n n 
C3E H77 A1LYA sing 127 n n 
C3E H78 A1LYA sing 128 n n 
C3F H79 A1LYA sing 129 n n 
C3F H80 A1LYA sing 130 n n 
C3G H81 A1LYA sing 131 n n 
C3G H82 A1LYA sing 132 n n 
C3G H83 A1LYA sing 133 n n 
#
_atom_sites.entry_id                     8IEI 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 A1LYA A 1 601 401 A1LYA PC1 . 
D 2 A1LYA B 1 601 401 A1LYA PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 A1LYA . . . D 2 161.983 158.735 209.845 1 77.46 ? O12 A1LYA 601 B 1 
HETATM 2 P P A1LYA . . . D 2 162.891 158.535 211.041 1 82.93 ? P A1LYA 601 B 1 
HETATM 3 O O14 A1LYA . . . D 2 163.893 159.654 211.106 1 68.31 ? O14 A1LYA 601 B 1 
HETATM 4 O O13 A1LYA . . . D 2 161.977 158.522 212.45 1 57.69 ? O13 A1LYA 601 B 1 
HETATM 5 C C11 A1LYA . . . D 2 162.661 158.828 213.663 1 62.25 ? C11 A1LYA 601 B 1 
HETATM 6 C C12 A1LYA . . . D 2 162.58 160.378 213.874 1 69.72 ? C12 A1LYA 601 B 1 
HETATM 7 N N A1LYA . . . D 2 163.726 160.961 214.628 1 76.43 ? N A1LYA 601 B 1 
HETATM 8 C C13 A1LYA . . . D 2 164.094 160.146 215.763 1 71.65 ? C13 A1LYA 601 B 1 
HETATM 9 C C14 A1LYA . . . D 2 164.891 161.134 213.753 1 69.02 ? C14 A1LYA 601 B 1 
HETATM 10 C C15 A1LYA . . . D 2 163.317 162.274 215.127 1 68.4 ? C15 A1LYA 601 B 1 
HETATM 11 O O11 A1LYA . . . D 2 163.698 157.068 210.922 1 70.82 ? O11 A1LYA 601 B 1 
HETATM 12 C C1 A1LYA . . . D 2 164.722 156.919 209.939 1 63.35 ? C1 A1LYA 601 B 1 
HETATM 13 C C2 A1LYA . . . D 2 165.005 155.401 209.77 1 65.05 ? C2 A1LYA 601 B 1 
HETATM 14 O O21 A1LYA . . . D 2 165.623 155.197 208.541 1 75.91 ? O21 A1LYA 601 B 1 
HETATM 15 C C21 A1LYA . . . D 2 166.947 155.574 208.409 1 67.45 ? C21 A1LYA 601 B 1 
HETATM 16 O O22 A1LYA . . . D 2 167.674 155.604 209.35 1 64.64 ? O22 A1LYA 601 B 1 
HETATM 17 C C22 A1LYA . . . D 2 167.474 155.936 207.03 1 56.48 ? C22 A1LYA 601 B 1 
HETATM 18 C C23 A1LYA . . . D 2 167.751 154.698 206.184 1 57.97 ? C23 A1LYA 601 B 1 
HETATM 19 C C24 A1LYA . . . D 2 167.888 154.992 204.668 1 57.19 ? C24 A1LYA 601 B 1 
HETATM 20 C C25 A1LYA . . . D 2 167.747 153.705 203.79 1 63.09 ? C25 A1LYA 601 B 1 
HETATM 21 C C26 A1LYA . . . D 2 166.966 153.953 202.452 1 65.9 ? C26 A1LYA 601 B 1 
HETATM 22 C C27 A1LYA . . . D 2 165.436 154.142 202.697 1 68.43 ? C27 A1LYA 601 B 1 
HETATM 23 C C28 A1LYA . . . D 2 164.552 153.387 201.657 1 64.88 ? C28 A1LYA 601 B 1 
HETATM 24 C C29 A1LYA . . . D 2 164.791 153.942 200.219 1 62.8 ? C29 A1LYA 601 B 1 
HETATM 25 C C2A A1LYA . . . D 2 163.542 153.9 199.292 1 63.5 ? C2A A1LYA 601 B 1 
HETATM 26 C C2B A1LYA . . . D 2 163.406 155.222 198.5 1 64.35 ? C2B A1LYA 601 B 1 
HETATM 27 C C2C A1LYA . . . D 2 164.615 155.445 197.548 1 64.59 ? C2C A1LYA 601 B 1 
HETATM 28 C C2D A1LYA . . . D 2 164.161 155.867 196.126 1 75.33 ? C2D A1LYA 601 B 1 
HETATM 29 C C2E A1LYA . . . D 2 163.462 157.261 196.064 1 72.87 ? C2E A1LYA 601 B 1 
HETATM 30 C C2F A1LYA . . . D 2 164.383 158.45 196.418 1 61.87 ? C2F A1LYA 601 B 1 
HETATM 31 C C2G A1LYA . . . D 2 163.682 159.814 196.222 1 58.27 ? C2G A1LYA 601 B 1 
HETATM 32 C C2H A1LYA . . . D 2 163.655 160.316 194.772 1 67.11 ? C2H A1LYA 601 B 1 
HETATM 33 C C2I A1LYA . . . D 2 164.992 160.914 194.319 1 65.26 ? C2I A1LYA 601 B 1 
HETATM 34 C C3 A1LYA . . . D 2 163.699 154.554 209.776 1 65.79 ? C3 A1LYA 601 B 1 
HETATM 35 O O31 A1LYA . . . D 2 162.659 155.341 209.218 1 69.95 ? O31 A1LYA 601 B 1 
HETATM 36 C C31 A1LYA . . . D 2 162.246 154.941 207.915 1 68.21 ? C31 A1LYA 601 B 1 
HETATM 37 O O32 A1LYA . . . D 2 161.362 154.158 207.783 1 70.5 ? O32 A1LYA 601 B 1 
HETATM 38 C C32 A1LYA . . . D 2 162.965 155.52 206.681 1 63.88 ? C32 A1LYA 601 B 1 
HETATM 39 C C33 A1LYA . . . D 2 162.036 156.367 205.781 1 69.56 ? C33 A1LYA 601 B 1 
HETATM 40 C C34 A1LYA . . . D 2 160.858 155.562 205.191 1 60.44 ? C34 A1LYA 601 B 1 
HETATM 41 C C35 A1LYA . . . D 2 160.205 156.321 204.025 1 71.07 ? C35 A1LYA 601 B 1 
HETATM 42 C C36 A1LYA . . . D 2 160.777 155.904 202.655 1 69.09 ? C36 A1LYA 601 B 1 
HETATM 43 C C37 A1LYA . . . D 2 160.145 154.615 202.135 1 66.51 ? C37 A1LYA 601 B 1 
HETATM 44 C C38 A1LYA . . . D 2 158.95 154.917 201.218 1 67.34 ? C38 A1LYA 601 B 1 
HETATM 45 C C39 A1LYA . . . D 2 159.404 155.113 199.765 1 61.79 ? C39 A1LYA 601 B 1 
HETATM 46 C C3A A1LYA . . . D 2 158.562 154.804 198.791 1 67.34 ? C3A A1LYA 601 B 1 
HETATM 47 C C3B A1LYA . . . D 2 158.95 154.972 197.311 1 63.28 ? C3B A1LYA 601 B 1 
HETATM 48 C C3C A1LYA . . . D 2 158.797 153.599 196.614 1 62.04 ? C3C A1LYA 601 B 1 
HETATM 49 C C3D A1LYA . . . D 2 159.516 153.554 195.24 1 66.51 ? C3D A1LYA 601 B 1 
HETATM 50 C C3E A1LYA . . . D 2 159.762 152.117 194.71 1 63.31 ? C3E A1LYA 601 B 1 
HETATM 51 C C3F A1LYA . . . D 2 158.821 151.722 193.546 1 63.31 ? C3F A1LYA 601 B 1 
HETATM 52 C C3G A1LYA . . . D 2 159.454 151.964 192.166 1 58.45 ? C3G A1LYA 601 B 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           52 
#