data_8IEP
#
_model_server_result.job_id            noDu_j2Uvc3XTJW2a6lA0A 
_model_server_result.datetime_utc      '2024-10-19 13:32:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8iep 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    8IEP 
#
_exptl.entry_id    8IEP 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(2R)-3-[(E)-hexadec-9-enoyl]oxy-2-octadecanoyloxy-propyl] 2-(trimethylazaniumyl)ethyl phosphate' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8IEP 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8IEP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 191 C CYS 191 1_555 A SG CYS 216 C CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 191 D CYS 191 1_555 B SG CYS 216 D CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                A1LYA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(2R)-3-[(E)-hexadec-9-enoyl]oxy-2-octadecanoyloxy-propyl] 2-(trimethylazaniumyl)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 N A1LYA sing 1 n n 
O22 C21 A1LYA doub 2 n n 
C14 N A1LYA sing 3 n n 
N C15 A1LYA sing 4 n n 
N C12 A1LYA sing 5 n n 
C21 C22 A1LYA sing 6 n n 
C21 O21 A1LYA sing 7 n n 
C11 C12 A1LYA sing 8 n n 
C11 O13 A1LYA sing 9 n n 
C22 C23 A1LYA sing 10 n n 
C2 C3 A1LYA sing 11 n n 
C2 O21 A1LYA sing 12 n n 
C2 C1 A1LYA sing 13 n n 
C3 O31 A1LYA sing 14 n n 
C23 C24 A1LYA sing 15 n n 
O11 C1 A1LYA sing 16 n n 
O11 P A1LYA sing 17 n n 
O13 P A1LYA sing 18 n n 
O31 C31 A1LYA sing 19 n n 
P O14 A1LYA doub 20 n n 
P O12 A1LYA sing 21 n n 
C24 C25 A1LYA sing 22 n n 
C25 C26 A1LYA sing 23 n n 
C31 O32 A1LYA doub 24 n n 
C31 C32 A1LYA sing 25 n n 
C26 C27 A1LYA sing 26 n n 
C32 C33 A1LYA sing 27 n n 
C27 C28 A1LYA sing 28 n n 
C33 C34 A1LYA sing 29 n n 
C34 C35 A1LYA sing 30 n n 
C28 C29 A1LYA sing 31 n n 
C35 C36 A1LYA sing 32 n n 
C29 C2A A1LYA sing 33 n n 
C36 C37 A1LYA sing 34 n n 
C2A C2B A1LYA sing 35 n n 
C37 C38 A1LYA sing 36 n n 
C2C C2B A1LYA sing 37 n n 
C2C C2D A1LYA sing 38 n n 
C38 C39 A1LYA sing 39 n n 
C2D C2E A1LYA sing 40 n n 
C2F C2E A1LYA sing 41 n n 
C2F C2G A1LYA sing 42 n n 
C39 C3A A1LYA doub 43 e n 
C2G C2H A1LYA sing 44 n n 
C3A C3B A1LYA sing 45 n n 
C3B C3C A1LYA sing 46 n n 
C3C C3D A1LYA sing 47 n n 
C2H C2I A1LYA sing 48 n n 
C3E C3D A1LYA sing 49 n n 
C3E C3F A1LYA sing 50 n n 
C3G C3F A1LYA sing 51 n n 
C11 H2 A1LYA sing 52 n n 
C11 H3 A1LYA sing 53 n n 
C12 H4 A1LYA sing 54 n n 
C12 H5 A1LYA sing 55 n n 
C13 H6 A1LYA sing 56 n n 
C13 H7 A1LYA sing 57 n n 
C13 H8 A1LYA sing 58 n n 
C14 H9 A1LYA sing 59 n n 
C14 H10 A1LYA sing 60 n n 
C14 H11 A1LYA sing 61 n n 
C15 H12 A1LYA sing 62 n n 
C15 H13 A1LYA sing 63 n n 
C15 H14 A1LYA sing 64 n n 
C1 H15 A1LYA sing 65 n n 
C1 H16 A1LYA sing 66 n n 
C2 H17 A1LYA sing 67 n n 
C22 H18 A1LYA sing 68 n n 
C22 H19 A1LYA sing 69 n n 
C23 H20 A1LYA sing 70 n n 
C23 H21 A1LYA sing 71 n n 
C24 H22 A1LYA sing 72 n n 
C24 H23 A1LYA sing 73 n n 
C25 H24 A1LYA sing 74 n n 
C25 H25 A1LYA sing 75 n n 
C26 H26 A1LYA sing 76 n n 
C26 H27 A1LYA sing 77 n n 
C27 H28 A1LYA sing 78 n n 
C27 H29 A1LYA sing 79 n n 
C28 H30 A1LYA sing 80 n n 
C28 H31 A1LYA sing 81 n n 
C29 H32 A1LYA sing 82 n n 
C29 H33 A1LYA sing 83 n n 
C2A H34 A1LYA sing 84 n n 
C2A H35 A1LYA sing 85 n n 
C2B H36 A1LYA sing 86 n n 
C2B H37 A1LYA sing 87 n n 
C2C H38 A1LYA sing 88 n n 
C2C H39 A1LYA sing 89 n n 
C2D H40 A1LYA sing 90 n n 
C2D H41 A1LYA sing 91 n n 
C2E H42 A1LYA sing 92 n n 
C2E H43 A1LYA sing 93 n n 
C2F H44 A1LYA sing 94 n n 
C2F H45 A1LYA sing 95 n n 
C2G H46 A1LYA sing 96 n n 
C2G H47 A1LYA sing 97 n n 
C2H H48 A1LYA sing 98 n n 
C2H H49 A1LYA sing 99 n n 
C2I H50 A1LYA sing 100 n n 
C2I H51 A1LYA sing 101 n n 
C2I H52 A1LYA sing 102 n n 
C3 H53 A1LYA sing 103 n n 
C3 H54 A1LYA sing 104 n n 
C32 H55 A1LYA sing 105 n n 
C32 H56 A1LYA sing 106 n n 
C33 H57 A1LYA sing 107 n n 
C33 H58 A1LYA sing 108 n n 
C34 H59 A1LYA sing 109 n n 
C34 H60 A1LYA sing 110 n n 
C35 H61 A1LYA sing 111 n n 
C35 H62 A1LYA sing 112 n n 
C36 H63 A1LYA sing 113 n n 
C36 H64 A1LYA sing 114 n n 
C37 H65 A1LYA sing 115 n n 
C37 H66 A1LYA sing 116 n n 
C38 H67 A1LYA sing 117 n n 
C38 H68 A1LYA sing 118 n n 
C39 H69 A1LYA sing 119 n n 
C3A H70 A1LYA sing 120 n n 
C3B H71 A1LYA sing 121 n n 
C3B H72 A1LYA sing 122 n n 
C3C H73 A1LYA sing 123 n n 
C3C H74 A1LYA sing 124 n n 
C3D H75 A1LYA sing 125 n n 
C3D H76 A1LYA sing 126 n n 
C3E H77 A1LYA sing 127 n n 
C3E H78 A1LYA sing 128 n n 
C3F H79 A1LYA sing 129 n n 
C3F H80 A1LYA sing 130 n n 
C3G H81 A1LYA sing 131 n n 
C3G H82 A1LYA sing 132 n n 
C3G H83 A1LYA sing 133 n n 
#
_atom_sites.entry_id                     8IEP 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 A1LYA C 1 601 401 A1LYA PC1 . 
D 2 A1LYA D 1 601 401 A1LYA PC1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O12 A1LYA . . . D 2 162.633 173.119 120.961 1 79.91 ? O12 A1LYA 601 D 1 
HETATM 2 P P A1LYA . . . D 2 163.59 173.36 119.811 1 94.65 ? P A1LYA 601 D 1 
HETATM 3 O O14 A1LYA . . . D 2 164.66 172.302 119.812 1 69.42 ? O14 A1LYA 601 D 1 
HETATM 4 O O13 A1LYA . . . D 2 162.747 173.299 118.359 1 55.47 ? O13 A1LYA 601 D 1 
HETATM 5 C C11 A1LYA . . . D 2 163.522 173.198 117.165 1 62.93 ? C11 A1LYA 601 D 1 
HETATM 6 C C12 A1LYA . . . D 2 163.737 171.676 116.866 1 72.31 ? C12 A1LYA 601 D 1 
HETATM 7 N N A1LYA . . . D 2 164.998 171.365 116.135 1 78.67 ? N A1LYA 601 D 1 
HETATM 8 C C13 A1LYA . . . D 2 165.245 172.305 115.061 1 73.3 ? C13 A1LYA 601 D 1 
HETATM 9 C C14 A1LYA . . . D 2 166.14 171.35 117.055 1 68.93 ? C14 A1LYA 601 D 1 
HETATM 10 C C15 A1LYA . . . D 2 164.856 170.031 115.551 1 63.26 ? C15 A1LYA 601 D 1 
HETATM 11 O O11 A1LYA . . . D 2 164.3 174.877 119.952 1 71.6 ? O11 A1LYA 601 D 1 
HETATM 12 C C1 A1LYA . . . D 2 165.233 175.122 121.006 1 59.56 ? C1 A1LYA 601 D 1 
HETATM 13 C C2 A1LYA . . . D 2 165.426 176.661 121.124 1 67.5 ? C2 A1LYA 601 D 1 
HETATM 14 O O21 A1LYA . . . D 2 166.021 176.948 122.348 1 77.16 ? O21 A1LYA 601 D 1 
HETATM 15 C C21 A1LYA . . . D 2 167.365 176.661 122.5 1 68.25 ? C21 A1LYA 601 D 1 
HETATM 16 O O22 A1LYA . . . D 2 168.102 176.65 121.566 1 62.28 ? O22 A1LYA 601 D 1 
HETATM 17 C C22 A1LYA . . . D 2 167.897 176.373 123.894 1 58.05 ? C22 A1LYA 601 D 1 
HETATM 18 C C23 A1LYA . . . D 2 168.07 177.642 124.721 1 56.11 ? C23 A1LYA 601 D 1 
HETATM 19 C C24 A1LYA . . . D 2 168.207 177.371 126.241 1 60.46 ? C24 A1LYA 601 D 1 
HETATM 20 C C25 A1LYA . . . D 2 167.918 178.633 127.117 1 65.91 ? C25 A1LYA 601 D 1 
HETATM 21 C C26 A1LYA . . . D 2 167.095 178.301 128.41 1 67.55 ? C26 A1LYA 601 D 1 
HETATM 22 C C27 A1LYA . . . D 2 165.571 178.115 128.107 1 68.03 ? C27 A1LYA 601 D 1 
HETATM 23 C C28 A1LYA . . . D 2 164.638 178.853 129.118 1 64.5 ? C28 A1LYA 601 D 1 
HETATM 24 C C29 A1LYA . . . D 2 164.854 178.315 130.566 1 60.35 ? C29 A1LYA 601 D 1 
HETATM 25 C C2A A1LYA . . . D 2 163.57 178.288 131.445 1 61.14 ? C2A A1LYA 601 D 1 
HETATM 26 C C2B A1LYA . . . D 2 163.508 176.992 132.289 1 65.22 ? C2B A1LYA 601 D 1 
HETATM 27 C C2C A1LYA . . . D 2 164.651 176.947 133.337 1 68.6 ? C2C A1LYA 601 D 1 
HETATM 28 C C2D A1LYA . . . D 2 164.143 176.45 134.715 1 76.22 ? C2D A1LYA 601 D 1 
HETATM 29 C C2E A1LYA . . . D 2 163.639 174.973 134.729 1 68.96 ? C2E A1LYA 601 D 1 
HETATM 30 C C2F A1LYA . . . D 2 164.706 173.939 134.306 1 63.3 ? C2F A1LYA 601 D 1 
HETATM 31 C C2G A1LYA . . . D 2 164.258 172.47 134.498 1 65.18 ? C2G A1LYA 601 D 1 
HETATM 32 C C2H A1LYA . . . D 2 164.185 171.954 135.946 1 64.13 ? C2H A1LYA 601 D 1 
HETATM 33 C C2I A1LYA . . . D 2 165.511 171.39 136.473 1 60.09 ? C2I A1LYA 601 D 1 
HETATM 34 C C3 A1LYA . . . D 2 164.074 177.429 121.081 1 68.1 ? C3 A1LYA 601 D 1 
HETATM 35 O O31 A1LYA . . . D 2 163.063 176.571 121.589 1 69.33 ? O31 A1LYA 601 D 1 
HETATM 36 C C31 A1LYA . . . D 2 162.561 176.938 122.873 1 69.69 ? C31 A1LYA 601 D 1 
HETATM 37 O O32 A1LYA . . . D 2 161.553 177.561 122.963 1 71.93 ? O32 A1LYA 601 D 1 
HETATM 38 C C32 A1LYA . . . D 2 163.342 176.536 124.14 1 63.97 ? C32 A1LYA 601 D 1 
HETATM 39 C C33 A1LYA . . . D 2 162.55 175.574 125.056 1 69.8 ? C33 A1LYA 601 D 1 
HETATM 40 C C34 A1LYA . . . D 2 161.226 176.177 125.571 1 60.65 ? C34 A1LYA 601 D 1 
HETATM 41 C C35 A1LYA . . . D 2 160.706 175.388 126.783 1 70.1 ? C35 A1LYA 601 D 1 
HETATM 42 C C36 A1LYA . . . D 2 161.169 175.991 128.125 1 68.18 ? C36 A1LYA 601 D 1 
HETATM 43 C C37 A1LYA . . . D 2 160.28 177.151 128.57 1 68.72 ? C37 A1LYA 601 D 1 
HETATM 44 C C38 A1LYA . . . D 2 159.111 176.655 129.437 1 69.5 ? C38 A1LYA 601 D 1 
HETATM 45 C C39 A1LYA . . . D 2 159.528 176.54 130.911 1 62.64 ? C39 A1LYA 601 D 1 
HETATM 46 C C3A A1LYA . . . D 2 158.625 176.782 131.853 1 66.38 ? C3A A1LYA 601 D 1 
HETATM 47 C C3B A1LYA . . . D 2 158.985 176.685 133.347 1 61.15 ? C3B A1LYA 601 D 1 
HETATM 48 C C3C A1LYA . . . D 2 158.807 178.073 134.011 1 59.97 ? C3C A1LYA 601 D 1 
HETATM 49 C C3D A1LYA . . . D 2 159.316 178.057 135.478 1 62.79 ? C3D A1LYA 601 D 1 
HETATM 50 C C3E A1LYA . . . D 2 159.773 179.422 136.043 1 64.6 ? C3E A1LYA 601 D 1 
HETATM 51 C C3F A1LYA . . . D 2 158.837 179.978 137.147 1 59.36 ? C3F A1LYA 601 D 1 
HETATM 52 C C3G A1LYA . . . D 2 159.205 179.475 138.552 1 53.64 ? C3G A1LYA 601 D 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           52 
#