data_8IF5 # _model_server_result.job_id KHUJozS-t1P9F3szSgz4cA _model_server_result.datetime_utc '2024-10-10 06:27:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8if5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 8IF5 # _exptl.entry_id 8IF5 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 312.274 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AFLATOXIN B1' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 A N1 DG 26 A DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 A O6 DG 26 A DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 A N2 DG 26 A DG 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DA 2 A DA 2 1_555 A N3 DT 25 A DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N6 DA 2 A DA 2 1_555 A O4 DT 25 A DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N3 DC 3 A DC 3 1_555 A N1 DG 24 A DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N4 DC 3 A DC 3 1_555 A O6 DG 24 A DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O2 DC 3 A DC 3 1_555 A N2 DG 24 A DG 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 DG 4 A DG 4 1_555 A N3 DC 23 A DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N2 DG 4 A DG 4 1_555 A O2 DC 23 A DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O6 DG 4 A DG 4 1_555 A N4 DC 23 A DC 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_16_PAIR hydrog12 A N3 DT 5 A DT 5 1_555 A O4 DT 22 A DT 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_16_PAIR hydrog13 A O2 DT 5 A DT 5 1_555 A N3 DT 22 A DT 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DG-DG MISPAIR' hydrog14 A N2 DG 6 A DG 6 1_555 A O6 DG 17 A DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DT-DC MISPAIR' hydrog15 A N3 DT 7 A DT 7 1_555 A O2 DC 15 A DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N1 DG 9 A DG 9 1_555 A N3 DC 15 A DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N2 DG 9 A DG 9 1_555 A O2 DC 15 A DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O6 DG 9 A DG 9 1_555 A N4 DC 15 A DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N3 DC 11 A DC 11 1_555 A N1 DG 19 A DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N4 DC 11 A DC 11 1_555 A O6 DG 19 A DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O2 DC 11 A DC 11 1_555 A N2 DG 19 A DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N3 DC 13 A DC 13 1_555 A N1 DG 17 A DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N4 DC 13 A DC 13 1_555 A O6 DG 17 A DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A O2 DC 13 A DC 13 1_555 A N2 DG 17 A DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C17 H12 O6' _chem_comp.formula_weight 312.274 _chem_comp.id AFT _chem_comp.mon_nstd_flag . _chem_comp.name 'AFLATOXIN B1' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8A O7 AFT sing 1 n n C8A C9 AFT doub 2 n n C9B C5A AFT sing 3 n y C9B C10 AFT doub 4 n y C9B C9A AFT sing 5 n n O7 C6A AFT sing 6 n n C6A O6A AFT sing 7 n n C6A C9A AFT sing 8 n n O6A C5A AFT sing 9 n n C5A C5B AFT doub 10 n y C5B C4B AFT sing 11 n y C4B O4 AFT sing 12 n n C4B C4A AFT doub 13 n y O4 CM AFT sing 14 n n C4A C10 AFT sing 15 n y C4A C3A AFT sing 16 n n C10 O10 AFT sing 17 n n O10 C11 AFT sing 18 n n C11 O11 AFT doub 19 n n C11 C12 AFT sing 20 n n C12 C3A AFT doub 21 n n C12 C1 AFT sing 22 n n C3A C3 AFT sing 23 n n C3 C2A AFT sing 24 n n C2A C1 AFT sing 25 n n C1 O1 AFT doub 26 n n C9A C9 AFT sing 27 n n C8A H8A1 AFT sing 28 n n C9 H91C AFT sing 29 n n C9A H9A AFT sing 30 n n C6A H6A AFT sing 31 n n C5B H5B AFT sing 32 n n CM HM1C AFT sing 33 n n CM HM2C AFT sing 34 n n CM HM3C AFT sing 35 n n C3 H31C AFT sing 36 n n C3 H32C AFT sing 37 n n C2A H2A1 AFT sing 38 n n C2A H2A2 AFT sing 39 n n # _atom_sites.entry_id 8IF5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id AFT _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 27 _pdbx_nonpoly_scheme.pdb_mon_id AFT _pdbx_nonpoly_scheme.auth_mon_id AFB _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8A AFT . . . B 2 5.824 6.08 10.208 1 0 ? C8A AFT 101 A 1 HETATM 2 C C9B AFT . . . B 2 8.112 4.855 11.846 1 0 ? C9B AFT 101 A 1 HETATM 3 O O7 AFT . . . B 2 5.068 5.003 10.55 1 0 ? O7 AFT 101 A 1 HETATM 4 C C6A AFT . . . B 2 5.965 4.181 11.31 1 0 ? C6A AFT 101 A 1 HETATM 5 O O6A AFT . . . B 2 6.032 4.577 12.688 1 0 ? O6A AFT 101 A 1 HETATM 6 C C5A AFT . . . B 2 7.356 4.75 12.936 1 0 ? C5A AFT 101 A 1 HETATM 7 C C5B AFT . . . B 2 7.904 4.86 14.144 1 0 ? C5B AFT 101 A 1 HETATM 8 C C4B AFT . . . B 2 9.267 5.096 14.276 1 0 ? C4B AFT 101 A 1 HETATM 9 O O4 AFT . . . B 2 9.846 5.367 15.477 1 0 ? O4 AFT 101 A 1 HETATM 10 C CM AFT . . . B 2 9.006 6.254 16.221 1 0 ? CM AFT 101 A 1 HETATM 11 C C4A AFT . . . B 2 10.062 5.217 13.144 1 0 ? C4A AFT 101 A 1 HETATM 12 C C10 AFT . . . B 2 9.421 5.082 11.918 1 0 ? C10 AFT 101 A 1 HETATM 13 O O10 AFT . . . B 2 10.16 4.483 10.945 1 0 ? O10 AFT 101 A 1 HETATM 14 C C11 AFT . . . B 2 11.42 4.998 10.941 1 0 ? C11 AFT 101 A 1 HETATM 15 O O11 AFT . . . B 2 11.947 5.515 9.956 1 0 ? O11 AFT 101 A 1 HETATM 16 C C12 AFT . . . B 2 12.069 4.905 12.097 1 0 ? C12 AFT 101 A 1 HETATM 17 C C3A AFT . . . B 2 11.381 5.062 13.226 1 0 ? C3A AFT 101 A 1 HETATM 18 C C3 AFT . . . B 2 12.219 4.956 14.329 1 0 ? C3 AFT 101 A 1 HETATM 19 C C2A AFT . . . B 2 13.606 4.724 13.723 1 0 ? C2A AFT 101 A 1 HETATM 20 C C9A AFT . . . B 2 7.324 4.555 10.741 1 0 ? C9A AFT 101 A 1 HETATM 21 C C1 AFT . . . B 2 13.363 4.725 12.357 1 0 ? C1 AFT 101 A 1 HETATM 22 C C9 AFT . . . B 2 7.058 5.66 9.942 1 0 ? C9 AFT 101 A 1 HETATM 23 O O1 AFT . . . B 2 14.254 4.986 11.55 1 0 ? O1 AFT 101 A 1 HETATM 24 H H8A1 AFT . . . B 2 5.48 7.113 10.159 1 0 ? H8A1 AFT 101 A 1 HETATM 25 H H91C AFT . . . B 2 7.744 6.108 9.22 1 0 ? H91C AFT 101 A 1 HETATM 26 H H9A AFT . . . B 2 7.727 3.738 10.147 1 0 ? H9A AFT 101 A 1 HETATM 27 H H6A AFT . . . B 2 5.761 3.118 11.189 1 0 ? H6A AFT 101 A 1 HETATM 28 H H5B AFT . . . B 2 7.281 4.764 15.033 1 0 ? H5B AFT 101 A 1 HETATM 29 H HM1C AFT . . . B 2 8.205 5.685 16.695 1 0 ? HM1C AFT 101 A 1 HETATM 30 H HM2C AFT . . . B 2 8.577 6.997 15.55 1 0 ? HM2C AFT 101 A 1 HETATM 31 H HM3C AFT . . . B 2 9.596 6.755 16.989 1 0 ? HM3C AFT 101 A 1 HETATM 32 H H31C AFT . . . B 2 11.928 4.112 14.952 1 0 ? H31C AFT 101 A 1 HETATM 33 H H32C AFT . . . B 2 12.208 5.881 14.906 1 0 ? H32C AFT 101 A 1 HETATM 34 H H2A1 AFT . . . B 2 14.004 3.757 14.038 1 0 ? H2A1 AFT 101 A 1 HETATM 35 H H2A2 AFT . . . B 2 14.286 5.527 14 1 0 ? H2A2 AFT 101 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 2392 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 35 #