data_8IF7 # _model_server_result.job_id ZdAqB6p4PguX9Ln1l0C_LQ _model_server_result.datetime_utc '2024-10-15 11:27:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8if7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8IF7 # _exptl.entry_id 8IF7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 318.22 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description '2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IF7 _cell.length_a 64.649 _cell.length_b 64.649 _cell.length_c 84.189 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IF7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 83 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 62 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C4A _struct_conn.ptnr2_label_comp_id P1T _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id P1T _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.465 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H15 N2 O7 P' _chem_comp.formula_weight 318.22 _chem_comp.id P1T _chem_comp.mon_nstd_flag . _chem_comp.name '2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8IF7 _atom_sites.fract_transf_matrix[1][1] 0.015468 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015468 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P1T A 1 401 401 P1T P1T . C 3 HOH A 1 501 49 HOH HOH . C 3 HOH A 2 502 53 HOH HOH . C 3 HOH A 3 503 41 HOH HOH . C 3 HOH A 4 504 36 HOH HOH . C 3 HOH A 5 505 16 HOH HOH . C 3 HOH A 6 506 35 HOH HOH . C 3 HOH A 7 507 21 HOH HOH . C 3 HOH A 8 508 31 HOH HOH . C 3 HOH A 9 509 38 HOH HOH . C 3 HOH A 10 510 42 HOH HOH . C 3 HOH A 11 511 58 HOH HOH . C 3 HOH A 12 512 40 HOH HOH . C 3 HOH A 13 513 9 HOH HOH . C 3 HOH A 14 514 48 HOH HOH . C 3 HOH A 15 515 14 HOH HOH . C 3 HOH A 16 516 46 HOH HOH . C 3 HOH A 17 517 5 HOH HOH . C 3 HOH A 18 518 24 HOH HOH . C 3 HOH A 19 519 22 HOH HOH . C 3 HOH A 20 520 17 HOH HOH . C 3 HOH A 21 521 39 HOH HOH . C 3 HOH A 22 522 30 HOH HOH . C 3 HOH A 23 523 51 HOH HOH . C 3 HOH A 24 524 12 HOH HOH . C 3 HOH A 25 525 13 HOH HOH . C 3 HOH A 26 526 20 HOH HOH . C 3 HOH A 27 527 7 HOH HOH . C 3 HOH A 28 528 54 HOH HOH . C 3 HOH A 29 529 26 HOH HOH . C 3 HOH A 30 530 6 HOH HOH . C 3 HOH A 31 531 33 HOH HOH . C 3 HOH A 32 532 28 HOH HOH . C 3 HOH A 33 533 10 HOH HOH . C 3 HOH A 34 534 15 HOH HOH . C 3 HOH A 35 535 4 HOH HOH . C 3 HOH A 36 536 3 HOH HOH . C 3 HOH A 37 537 19 HOH HOH . C 3 HOH A 38 538 59 HOH HOH . C 3 HOH A 39 539 1 HOH HOH . C 3 HOH A 40 540 37 HOH HOH . C 3 HOH A 41 541 11 HOH HOH . C 3 HOH A 42 542 2 HOH HOH . C 3 HOH A 43 543 27 HOH HOH . C 3 HOH A 44 544 43 HOH HOH . C 3 HOH A 45 545 29 HOH HOH . C 3 HOH A 46 546 18 HOH HOH . C 3 HOH A 47 547 34 HOH HOH . C 3 HOH A 48 548 8 HOH HOH . C 3 HOH A 49 549 44 HOH HOH . C 3 HOH A 50 550 23 HOH HOH . C 3 HOH A 51 551 32 HOH HOH . C 3 HOH A 52 552 45 HOH HOH . C 3 HOH A 53 553 57 HOH HOH . C 3 HOH A 54 554 56 HOH HOH . C 3 HOH A 55 555 25 HOH HOH . C 3 HOH A 56 556 55 HOH HOH . C 3 HOH A 57 557 50 HOH HOH . C 3 HOH A 58 558 52 HOH HOH . C 3 HOH A 59 559 60 HOH HOH . C 3 HOH A 60 560 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OP1 P1T . . . B 2 -24.519 8.722 2.265 1 17.44 ? OP1 P1T 401 A 1 HETATM 2 P P P1T . . . B 2 -24.564 7.406 2.989 1 18.24 ? P P1T 401 A 1 HETATM 3 O OP2 P1T . . . B 2 -25.884 6.65 2.887 1 17.21 ? OP2 P1T 401 A 1 HETATM 4 O OP3 P1T . . . B 2 -24.041 7.475 4.414 1 15.6 ? OP3 P1T 401 A 1 HETATM 5 O OP4 P1T . . . B 2 -23.515 6.462 2.175 1 19.54 ? OP4 P1T 401 A 1 HETATM 6 C C5A P1T . . . B 2 -22.083 6.737 2.213 1 21.05 ? C5A P1T 401 A 1 HETATM 7 C C5 P1T . . . B 2 -21.362 6.317 0.959 1 21.51 ? C5 P1T 401 A 1 HETATM 8 C C6 P1T . . . B 2 -20.362 5.362 1.062 1 21.79 ? C6 P1T 401 A 1 HETATM 9 N N1 P1T . . . B 2 -19.64 4.917 0.019 1 21.9 ? N1 P1T 401 A 1 HETATM 10 C C2 P1T . . . B 2 -19.836 5.453 -1.184 1 21.53 ? C2 P1T 401 A 1 HETATM 11 C C2A P1T . . . B 2 -19.023 4.933 -2.33 1 23.53 ? C2A P1T 401 A 1 HETATM 12 C C3 P1T . . . B 2 -20.856 6.394 -1.401 1 20.86 ? C3 P1T 401 A 1 HETATM 13 O O3A P1T . . . B 2 -21.089 6.857 -2.696 1 19.49 ? O3A P1T 401 A 1 HETATM 14 C C4 P1T . . . B 2 -21.598 6.882 -0.314 1 21.33 ? C4 P1T 401 A 1 HETATM 15 C C4A P1T . . . B 2 -22.659 7.935 -0.559 1 22.54 ? C4A P1T 401 A 1 HETATM 16 N N P1T . . . B 2 -22.143 9.302 -0.656 1 26.51 ? N P1T 401 A 1 HETATM 17 C CA P1T . . . B 2 -22.576 10.386 -1.414 1 27.91 ? CA P1T 401 A 1 HETATM 18 C CB P1T . . . B 2 -22.52 11.496 -0.696 1 27.16 ? CB P1T 401 A 1 HETATM 19 C C P1T . . . B 2 -23.147 10.53 -2.712 1 34.02 ? C P1T 401 A 1 HETATM 20 O O P1T . . . B 2 -23.287 11.69 -3.183 1 29.36 ? O P1T 401 A 1 HETATM 21 O OXT P1T . . . B 2 -23.46 9.552 -3.427 1 28.65 ? OXT P1T 401 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #