data_8IHJ # _model_server_result.job_id ZNFEgM5PYjE5YwK8jFYvLg _model_server_result.datetime_utc '2024-10-11 00:30:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ihj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 8IHJ # _exptl.entry_id 8IHJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 218.205 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(5~{S})-5-methyl-4-oxidanylidene-5-phenyl-furan-2-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IHJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IHJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 147 R CYS 18 1_555 A SG CYS 312 R CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 148 R CYS 19 1_555 A SG CYS 395 R CYS 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 229 R CYS 100 1_555 A SG CYS 306 R CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C12 H10 O4' _chem_comp.formula_weight 218.205 _chem_comp.id P9X _chem_comp.mon_nstd_flag . _chem_comp.name '(5~{S})-5-methyl-4-oxidanylidene-5-phenyl-furan-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Acifran # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 P9X sing 235 n n C7 C8 P9X doub 236 n y C7 C6 P9X sing 237 n y C8 C9 P9X sing 238 n y O C2 P9X doub 239 n n C1 C6 P9X sing 240 n n C1 C2 P9X sing 241 n n C1 O1 P9X sing 242 n n C6 C11 P9X doub 243 n y C9 C10 P9X doub 244 n y C2 C3 P9X sing 245 n n O1 C4 P9X sing 246 n n C11 C10 P9X sing 247 n y C3 C4 P9X doub 248 n n C4 C5 P9X sing 249 n n C5 O3 P9X doub 250 n n C5 O2 P9X sing 251 n n C9 H1 P9X sing 252 n n C10 H2 P9X sing 253 n n C H3 P9X sing 254 n n C H4 P9X sing 255 n n C H5 P9X sing 256 n n C11 H6 P9X sing 257 n n C3 H7 P9X sing 258 n n C7 H8 P9X sing 259 n n C8 H9 P9X sing 260 n n O2 H10 P9X sing 261 n n # _atom_sites.entry_id 8IHJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id F _pdbx_nonpoly_scheme.entity_id 6 _pdbx_nonpoly_scheme.mon_id P9X _pdbx_nonpoly_scheme.pdb_strand_id R _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num 301 _pdbx_nonpoly_scheme.pdb_mon_id P9X _pdbx_nonpoly_scheme.auth_mon_id ACF _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 P9X . . . F 6 75.481 77.309 119.311 1 126.04 ? C1 P9X 501 R 1 HETATM 2 C C2 P9X . . . F 6 76.445 76.924 120.449 1 125.55 ? C2 P9X 501 R 1 HETATM 3 C C4 P9X . . . F 6 77.641 77.505 118.61 1 127.84 ? C4 P9X 501 R 1 HETATM 4 C C5 P9X . . . F 6 78.618 77.833 117.547 1 127.84 ? C5 P9X 501 R 1 HETATM 5 C C6 P9X . . . F 6 74.659 76.104 118.866 1 127.1 ? C6 P9X 501 R 1 HETATM 6 C C9 P9X . . . F 6 73.184 73.88 118.048 1 128.1 ? C9 P9X 501 R 1 HETATM 7 O O3 P9X . . . F 6 79.38 76.994 117.086 1 129.66 ? O3 P9X 501 R 1 HETATM 8 C C10 P9X . . . F 6 73.949 74.577 117.138 1 126.94 ? C10 P9X 501 R 1 HETATM 9 C C P9X . . . F 6 74.636 78.531 119.659 1 126.51 ? C P9X 501 R 1 HETATM 10 O O P9X . . . F 6 76.124 76.574 121.574 1 125.93 ? O P9X 501 R 1 HETATM 11 C C11 P9X . . . F 6 74.681 75.682 117.541 1 127.22 ? C11 P9X 501 R 1 HETATM 12 C C3 P9X . . . F 6 77.774 77.075 119.895 1 126.47 ? C3 P9X 501 R 1 HETATM 13 C C7 P9X . . . F 6 73.877 75.396 119.772 1 128.91 ? C7 P9X 501 R 1 HETATM 14 C C8 P9X . . . F 6 73.147 74.292 119.364 1 129.28 ? C8 P9X 501 R 1 HETATM 15 O O1 P9X . . . F 6 76.355 77.685 118.199 1 127.61 ? O1 P9X 501 R 1 HETATM 16 O O2 P9X . . . F 6 78.573 79.071 117.134 1 126.36 ? O2 P9X 501 R 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #