data_8IJK # _model_server_result.job_id 1WAGnULxnXOioRQ5CsTv2g _model_server_result.datetime_utc '2024-10-11 08:28:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ijk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":801}' # _entry.id 8IJK # _exptl.entry_id 8IJK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 291.319 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(1,2-dihydroacenaphthylen-5-yl)-4-fluoranyl-benzamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IJK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IJK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C19 H14 F N O' _chem_comp.formula_weight 291.319 _chem_comp.id 7PN _chem_comp.mon_nstd_flag . _chem_comp.name N-(1,2-dihydroacenaphthylen-5-yl)-4-fluoranyl-benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C9 7PN sing 1 n n C7 C3 7PN sing 2 n n C8 C3 7PN doub 3 n y C8 C11 7PN sing 4 n y C9 C4 7PN sing 5 n n C3 C1 7PN sing 6 n y C11 C5 7PN doub 7 n y C1 C4 7PN doub 8 n y C1 C2 7PN sing 9 n y C4 C10 7PN sing 10 n y C5 C2 7PN sing 11 n y C2 C6 7PN doub 12 n y C10 C12 7PN doub 13 n y C6 C12 7PN sing 14 n y C6 N1 7PN sing 15 n n N1 C13 7PN sing 16 n n C13 C14 7PN sing 17 n n C13 O1 7PN doub 18 n n C14 C19 7PN doub 19 n y C14 C15 7PN sing 20 n y C19 C18 7PN sing 21 n y C15 C16 7PN doub 22 n y C18 C17 7PN doub 23 n y C16 C17 7PN sing 24 n y C17 F1 7PN sing 25 n n N1 H10 7PN sing 26 n n C7 H2 7PN sing 27 n n C7 H3 7PN sing 28 n n C8 H4 7PN sing 29 n n C9 H5 7PN sing 30 n n C9 H6 7PN sing 31 n n C10 H7 7PN sing 32 n n C11 H8 7PN sing 33 n n C12 H9 7PN sing 34 n n C15 H11 7PN sing 35 n n C18 H13 7PN sing 36 n n C19 H14 7PN sing 37 n n C5 H1 7PN sing 38 n n C16 H12 7PN sing 39 n n # _atom_sites.entry_id 8IJK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 7PN A 1 801 4 7PN EBI . J 3 7PN B 1 801 1 7PN EBI . K 3 7PN C 1 801 3 7PN EBI . L 3 7PN D 1 801 2 7PN EBI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 7PN . . . I 3 123.129 105.15 119.922 1 78.93 0 N1 7PN 801 A 1 HETATM 2 C C2 7PN . . . I 3 124.741 106.812 120.661 1 78.93 0 C2 7PN 801 A 1 HETATM 3 C C3 7PN . . . I 3 126.3 108.585 121.411 1 78.93 0 C3 7PN 801 A 1 HETATM 4 C C4 7PN . . . I 3 124.068 109.112 121.005 1 78.93 0 C4 7PN 801 A 1 HETATM 5 C C7 7PN . . . I 3 126.2 110.062 121.707 1 78.93 0 C7 7PN 801 A 1 HETATM 6 C C8 7PN . . . I 3 127.394 107.646 121.458 1 78.93 0 C8 7PN 801 A 1 HETATM 7 C C9 7PN . . . I 3 124.738 110.423 121.452 1 78.93 0 C9 7PN 801 A 1 HETATM 8 C C10 7PN . . . I 3 122.78 108.802 120.642 1 78.93 0 C10 7PN 801 A 1 HETATM 9 C C11 7PN . . . I 3 127.176 106.326 121.121 1 78.93 0 C11 7PN 801 A 1 HETATM 10 C C12 7PN . . . I 3 122.471 107.5 120.287 1 78.93 0 C12 7PN 801 A 1 HETATM 11 C C13 7PN . . . I 3 122.938 104.852 118.524 1 78.93 0 C13 7PN 801 A 1 HETATM 12 C C15 7PN . . . I 3 121.209 102.966 117.835 1 78.93 0 C15 7PN 801 A 1 HETATM 13 C C18 7PN . . . I 3 123.38 101.164 117.523 1 78.93 0 C18 7PN 801 A 1 HETATM 14 C C19 7PN . . . I 3 123.637 102.599 117.95 1 78.93 0 C19 7PN 801 A 1 HETATM 15 C C1 7PN . . . I 3 125.011 108.112 121.008 1 78.93 0 C1 7PN 801 A 1 HETATM 16 O O1 7PN . . . I 3 123.035 105.712 117.721 1 78.93 0 O1 7PN 801 A 1 HETATM 17 C C5 7PN . . . I 3 125.853 105.867 120.714 1 78.93 0 C5 7PN 801 A 1 HETATM 18 C C6 7PN . . . I 3 123.44 106.506 120.299 1 78.93 0 C6 7PN 801 A 1 HETATM 19 C C14 7PN . . . I 3 122.634 103.429 118.094 1 78.93 0 C14 7PN 801 A 1 HETATM 20 C C16 7PN . . . I 3 120.985 101.726 117.467 1 78.93 0 C16 7PN 801 A 1 HETATM 21 C C17 7PN . . . I 3 122.153 100.762 117.3 1 78.93 0 C17 7PN 801 A 1 HETATM 22 F F1 7PN . . . I 3 121.936 99.475 116.916 1 78.93 0 F1 7PN 801 A 1 HETATM 23 H H10 7PN . . . I 3 123.072 104.529 120.516 1 78.93 0 H10 7PN 801 A 1 HETATM 24 H H2 7PN . . . I 3 126.442 110.237 122.63 1 78.93 0 H2 7PN 801 A 1 HETATM 25 H H3 7PN . . . I 3 126.775 110.56 121.106 1 78.93 0 H3 7PN 801 A 1 HETATM 26 H H4 7PN . . . I 3 128.242 107.929 121.716 1 78.93 0 H4 7PN 801 A 1 HETATM 27 H H5 7PN . . . I 3 124.666 111.093 120.754 1 78.93 0 H5 7PN 801 A 1 HETATM 28 H H6 7PN . . . I 3 124.329 110.743 122.27 1 78.93 0 H6 7PN 801 A 1 HETATM 29 H H7 7PN . . . I 3 122.124 109.461 120.633 1 78.93 0 H7 7PN 801 A 1 HETATM 30 H H8 7PN . . . I 3 127.883 105.722 121.152 1 78.93 0 H8 7PN 801 A 1 HETATM 31 H H9 7PN . . . I 3 121.601 107.288 120.039 1 78.93 0 H9 7PN 801 A 1 HETATM 32 H H11 7PN . . . I 3 120.5 103.558 117.938 1 78.93 0 H11 7PN 801 A 1 HETATM 33 H H13 7PN . . . I 3 124.089 100.573 117.421 1 78.93 0 H13 7PN 801 A 1 HETATM 34 H H14 7PN . . . I 3 124.507 102.888 118.111 1 78.93 0 H14 7PN 801 A 1 HETATM 35 H H1 7PN . . . I 3 125.719 104.976 120.488 1 78.93 0 H1 7PN 801 A 1 HETATM 36 H H12 7PN . . . I 3 120.116 101.437 117.306 1 78.93 0 H12 7PN 801 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #