data_8IJK # _model_server_result.job_id rKmHdZBs40lnf5liJu4FiQ _model_server_result.datetime_utc '2024-10-11 08:29:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ijk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":801}' # _entry.id 8IJK # _exptl.entry_id 8IJK _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 291.319 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(1,2-dihydroacenaphthylen-5-yl)-4-fluoranyl-benzamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IJK _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IJK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C19 H14 F N O' _chem_comp.formula_weight 291.319 _chem_comp.id 7PN _chem_comp.mon_nstd_flag . _chem_comp.name N-(1,2-dihydroacenaphthylen-5-yl)-4-fluoranyl-benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C9 7PN sing 1 n n C7 C3 7PN sing 2 n n C8 C3 7PN doub 3 n y C8 C11 7PN sing 4 n y C9 C4 7PN sing 5 n n C3 C1 7PN sing 6 n y C11 C5 7PN doub 7 n y C1 C4 7PN doub 8 n y C1 C2 7PN sing 9 n y C4 C10 7PN sing 10 n y C5 C2 7PN sing 11 n y C2 C6 7PN doub 12 n y C10 C12 7PN doub 13 n y C6 C12 7PN sing 14 n y C6 N1 7PN sing 15 n n N1 C13 7PN sing 16 n n C13 C14 7PN sing 17 n n C13 O1 7PN doub 18 n n C14 C19 7PN doub 19 n y C14 C15 7PN sing 20 n y C19 C18 7PN sing 21 n y C15 C16 7PN doub 22 n y C18 C17 7PN doub 23 n y C16 C17 7PN sing 24 n y C17 F1 7PN sing 25 n n N1 H10 7PN sing 26 n n C7 H2 7PN sing 27 n n C7 H3 7PN sing 28 n n C8 H4 7PN sing 29 n n C9 H5 7PN sing 30 n n C9 H6 7PN sing 31 n n C10 H7 7PN sing 32 n n C11 H8 7PN sing 33 n n C12 H9 7PN sing 34 n n C15 H11 7PN sing 35 n n C18 H13 7PN sing 36 n n C19 H14 7PN sing 37 n n C5 H1 7PN sing 38 n n C16 H12 7PN sing 39 n n # _atom_sites.entry_id 8IJK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 7PN A 1 801 4 7PN EBI . J 3 7PN B 1 801 1 7PN EBI . K 3 7PN C 1 801 3 7PN EBI . L 3 7PN D 1 801 2 7PN EBI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 7PN . . . J 3 105.146 100.067 119.921 1 79.02 0 N1 7PN 801 B 1 HETATM 2 C C2 7PN . . . J 3 106.808 98.454 120.66 1 79.02 0 C2 7PN 801 B 1 HETATM 3 C C3 7PN . . . J 3 108.582 96.895 121.41 1 79.02 0 C3 7PN 801 B 1 HETATM 4 C C4 7PN . . . J 3 109.108 99.127 121.004 1 79.02 0 C4 7PN 801 B 1 HETATM 5 C C7 7PN . . . J 3 110.058 96.995 121.705 1 79.02 0 C7 7PN 801 B 1 HETATM 6 C C8 7PN . . . J 3 107.642 95.801 121.457 1 79.02 0 C8 7PN 801 B 1 HETATM 7 C C9 7PN . . . J 3 110.42 98.457 121.45 1 79.02 0 C9 7PN 801 B 1 HETATM 8 C C10 7PN . . . J 3 108.798 100.415 120.642 1 79.02 0 C10 7PN 801 B 1 HETATM 9 C C11 7PN . . . J 3 106.323 96.02 121.12 1 79.02 0 C11 7PN 801 B 1 HETATM 10 C C12 7PN . . . J 3 107.497 100.724 120.287 1 79.02 0 C12 7PN 801 B 1 HETATM 11 C C13 7PN . . . J 3 104.849 100.259 118.523 1 79.02 0 C13 7PN 801 B 1 HETATM 12 C C15 7PN . . . J 3 102.964 101.987 117.833 1 79.02 0 C15 7PN 801 B 1 HETATM 13 C C18 7PN . . . J 3 101.162 99.817 117.52 1 79.02 0 C18 7PN 801 B 1 HETATM 14 C C19 7PN . . . J 3 102.597 99.559 117.948 1 79.02 0 C19 7PN 801 B 1 HETATM 15 C C1 7PN . . . J 3 108.108 98.185 121.007 1 79.02 0 C1 7PN 801 B 1 HETATM 16 O O1 7PN . . . J 3 105.71 100.162 117.72 1 79.02 0 O1 7PN 801 B 1 HETATM 17 C C5 7PN . . . J 3 105.864 97.342 120.712 1 79.02 0 C5 7PN 801 B 1 HETATM 18 C C6 7PN . . . J 3 106.502 99.755 120.298 1 79.02 0 C6 7PN 801 B 1 HETATM 19 C C14 7PN . . . J 3 103.425 100.563 118.093 1 79.02 0 C14 7PN 801 B 1 HETATM 20 C C16 7PN . . . J 3 101.724 102.212 117.464 1 79.02 0 C16 7PN 801 B 1 HETATM 21 C C17 7PN . . . J 3 100.761 101.044 117.297 1 79.02 0 C17 7PN 801 B 1 HETATM 22 F F1 7PN . . . J 3 99.473 101.261 116.913 1 79.02 0 F1 7PN 801 B 1 HETATM 23 H H10 7PN . . . J 3 104.526 100.123 120.514 1 79.02 0 H10 7PN 801 B 1 HETATM 24 H H2 7PN . . . J 3 110.234 96.753 122.628 1 79.02 0 H2 7PN 801 B 1 HETATM 25 H H3 7PN . . . J 3 110.557 96.42 121.105 1 79.02 0 H3 7PN 801 B 1 HETATM 26 H H4 7PN . . . J 3 107.924 94.953 121.715 1 79.02 0 H4 7PN 801 B 1 HETATM 27 H H5 7PN . . . J 3 111.09 98.529 120.753 1 79.02 0 H5 7PN 801 B 1 HETATM 28 H H6 7PN . . . J 3 110.74 98.866 122.269 1 79.02 0 H6 7PN 801 B 1 HETATM 29 H H7 7PN . . . J 3 109.457 101.072 120.634 1 79.02 0 H7 7PN 801 B 1 HETATM 30 H H8 7PN . . . J 3 105.719 95.313 121.15 1 79.02 0 H8 7PN 801 B 1 HETATM 31 H H9 7PN . . . J 3 107.286 101.594 120.038 1 79.02 0 H9 7PN 801 B 1 HETATM 32 H H11 7PN . . . J 3 103.556 102.696 117.936 1 79.02 0 H11 7PN 801 B 1 HETATM 33 H H13 7PN . . . J 3 100.57 99.107 117.417 1 79.02 0 H13 7PN 801 B 1 HETATM 34 H H14 7PN . . . J 3 102.884 98.69 118.108 1 79.02 0 H14 7PN 801 B 1 HETATM 35 H H1 7PN . . . J 3 104.972 97.477 120.486 1 79.02 0 H1 7PN 801 B 1 HETATM 36 H H12 7PN . . . J 3 101.436 103.081 117.303 1 79.02 0 H12 7PN 801 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #