data_8IL4
#
_model_server_result.job_id            XAZKyI9gcC4XCHWp9KdWJw 
_model_server_result.datetime_utc      '2024-11-12 23:59:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8il4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1000}' 
#
_entry.id    8IL4 
#
_exptl.entry_id    8IL4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.294 
_cell.angle_gamma         90 
_cell.entry_id            8IL4 
_cell.length_a            71.706 
_cell.length_b            187.433 
_cell.length_c            118.532 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8IL4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E 1 1 
C,G 1 3 
B,F 2 1 
D,H 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -71.706 0 0 
3 'crystal symmetry operation' 2_555 -x,y+1/2,-z -1 0 0 0 1 0 0 0 -1 0 93.7165 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     8IL4 
_atom_sites.fract_transf_matrix[1][1]    0.013946 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000072 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005335 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008437 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 1000 1000 FAD FAD . 
F 2 FAD B 1 1000 1000 FAD FAD . 
G 2 FAD C 1 1000 1000 FAD FAD . 
H 2 FAD D 1 1000 1000 FAD FAD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . G 2 1.615 -9.915 33.303 1 25.53 ? PA FAD 1000 C 1 
HETATM 2 O O1A FAD . . . G 2 2.692 -10.811 32.785 1 25.53 ? O1A FAD 1000 C 1 
HETATM 3 O O2A FAD . . . G 2 0.61 -9.688 32.235 1 25.53 ? O2A FAD 1000 C 1 
HETATM 4 O O5B FAD . . . G 2 0.863 -10.548 34.581 1 25.53 ? O5B FAD 1000 C 1 
HETATM 5 C C5B FAD . . . G 2 0.814 -9.734 35.786 1 25.53 ? C5B FAD 1000 C 1 
HETATM 6 C C4B FAD . . . G 2 0.983 -10.541 37.109 1 25.53 ? C4B FAD 1000 C 1 
HETATM 7 O O4B FAD . . . G 2 0.156 -10.106 38.012 1 25.53 ? O4B FAD 1000 C 1 
HETATM 8 C C3B FAD . . . G 2 0.669 -12.03 36.947 1 25.53 ? C3B FAD 1000 C 1 
HETATM 9 O O3B FAD . . . G 2 1.667 -12.737 37.445 1 25.53 ? O3B FAD 1000 C 1 
HETATM 10 C C2B FAD . . . G 2 -0.59 -12.276 37.788 1 25.53 ? C2B FAD 1000 C 1 
HETATM 11 O O2B FAD . . . G 2 -0.514 -13.631 38.426 1 25.53 ? O2B FAD 1000 C 1 
HETATM 12 C C1B FAD . . . G 2 -0.583 -11.357 38.683 1 25.53 ? C1B FAD 1000 C 1 
HETATM 13 N N9A FAD . . . G 2 -1.92 -10.979 38.914 1 25.53 ? N9A FAD 1000 C 1 
HETATM 14 C C8A FAD . . . G 2 -2.849 -10.885 37.961 1 25.53 ? C8A FAD 1000 C 1 
HETATM 15 N N7A FAD . . . G 2 -4.014 -10.512 38.54 1 25.53 ? N7A FAD 1000 C 1 
HETATM 16 C C5A FAD . . . G 2 -3.784 -10.382 39.859 1 25.53 ? C5A FAD 1000 C 1 
HETATM 17 C C6A FAD . . . G 2 -4.63 -10.021 40.904 1 25.53 ? C6A FAD 1000 C 1 
HETATM 18 N N6A FAD . . . G 2 -6.012 -9.655 41.035 1 25.53 ? N6A FAD 1000 C 1 
HETATM 19 N N1A FAD . . . G 2 -4.159 -9.96 42.157 1 25.53 ? N1A FAD 1000 C 1 
HETATM 20 C C2A FAD . . . G 2 -2.848 -10.251 42.4 1 25.53 ? C2A FAD 1000 C 1 
HETATM 21 N N3A FAD . . . G 2 -2.02 -10.6 41.383 1 25.53 ? N3A FAD 1000 C 1 
HETATM 22 C C4A FAD . . . G 2 -2.499 -10.662 40.098 1 25.53 ? C4A FAD 1000 C 1 
HETATM 23 N N1 FAD . . . G 2 6.463 -11.034 25.218 1 25.53 ? N1 FAD 1000 C 1 
HETATM 24 C C2 FAD . . . G 2 7.674 -10.894 24.41 1 25.53 ? C2 FAD 1000 C 1 
HETATM 25 O O2 FAD . . . G 2 8.192 -9.804 24.227 1 25.53 ? O2 FAD 1000 C 1 
HETATM 26 N N3 FAD . . . G 2 8.277 -12.096 23.802 1 25.53 ? N3 FAD 1000 C 1 
HETATM 27 C C4 FAD . . . G 2 7.677 -13.382 24.006 1 25.53 ? C4 FAD 1000 C 1 
HETATM 28 O O4 FAD . . . G 2 8.175 -14.38 23.506 1 25.53 ? O4 FAD 1000 C 1 
HETATM 29 C C4X FAD . . . G 2 6.443 -13.498 24.827 1 25.53 ? C4X FAD 1000 C 1 
HETATM 30 N N5 FAD . . . G 2 5.851 -14.78 25.022 1 25.53 ? N5 FAD 1000 C 1 
HETATM 31 C C5X FAD . . . G 2 4.652 -14.908 25.828 1 25.53 ? C5X FAD 1000 C 1 
HETATM 32 C C6 FAD . . . G 2 4.078 -16.182 26.022 1 25.53 ? C6 FAD 1000 C 1 
HETATM 33 C C7 FAD . . . G 2 2.924 -16.296 26.797 1 25.53 ? C7 FAD 1000 C 1 
HETATM 34 C C7M FAD . . . G 2 2.477 -17.76 26.872 1 25.53 ? C7M FAD 1000 C 1 
HETATM 35 C C8 FAD . . . G 2 2.352 -15.18 27.37 1 25.53 ? C8 FAD 1000 C 1 
HETATM 36 C C8M FAD . . . G 2 1.101 -15.326 28.212 1 25.53 ? C8M FAD 1000 C 1 
HETATM 37 C C9 FAD . . . G 2 2.919 -13.914 27.189 1 25.53 ? C9 FAD 1000 C 1 
HETATM 38 C C9A FAD . . . G 2 4.081 -13.789 26.406 1 25.53 ? C9A FAD 1000 C 1 
HETATM 39 N N10 FAD . . . G 2 4.699 -12.459 26.214 1 25.53 ? N10 FAD 1000 C 1 
HETATM 40 C C10 FAD . . . G 2 5.859 -12.326 25.423 1 25.53 ? C10 FAD 1000 C 1 
HETATM 41 C C1' FAD . . . G 2 4.059 -11.271 26.805 1 25.53 ? C1' FAD 1000 C 1 
HETATM 42 C C2' FAD . . . G 2 4.702 -10.8 28.091 1 25.53 ? C2' FAD 1000 C 1 
HETATM 43 O O2' FAD . . . G 2 4.983 -11.916 28.824 1 25.53 ? O2' FAD 1000 C 1 
HETATM 44 C C3' FAD . . . G 2 3.637 -9.968 28.778 1 25.53 ? C3' FAD 1000 C 1 
HETATM 45 O O3' FAD . . . G 2 2.968 -9.167 27.828 1 25.53 ? O3' FAD 1000 C 1 
HETATM 46 C C4' FAD . . . G 2 4.254 -9.115 29.843 1 25.53 ? C4' FAD 1000 C 1 
HETATM 47 O O4' FAD . . . G 2 4.573 -9.977 30.895 1 25.53 ? O4' FAD 1000 C 1 
HETATM 48 C C5' FAD . . . G 2 3.247 -8.139 30.384 1 25.53 ? C5' FAD 1000 C 1 
HETATM 49 O O5' FAD . . . G 2 3.603 -7.844 31.741 1 25.53 ? O5' FAD 1000 C 1 
HETATM 50 P P FAD . . . G 2 2.517 -7.353 32.739 1 25.53 ? P FAD 1000 C 1 
HETATM 51 O O1P FAD . . . G 2 3.079 -6.222 33.547 1 25.53 ? O1P FAD 1000 C 1 
HETATM 52 O O2P FAD . . . G 2 1.264 -6.914 32.037 1 25.53 ? O2P FAD 1000 C 1 
HETATM 53 O O3P FAD . . . G 2 2.231 -8.534 33.755 1 25.53 ? O3P FAD 1000 C 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           53 
#