data_8IMM # _model_server_result.job_id 6_PM_ENMEA-UUxBCL62_bg _model_server_result.datetime_utc '2024-11-04 23:08:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8imm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"MC","auth_seq_id":201}' # _entry.id 8IMM # _exptl.entry_id 8IMM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 588.694 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHYCOCYANOBILIN _entity.pdbx_number_of_molecules 54 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 41-meric _pdbx_struct_assembly.oligomeric_count 41 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB,AC,BC,CC,DC,EC,FC,GC,HC,IC,JC,KC,LC,MC,NC,OC,PC,QC _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 PA N N ? 6 QA N N ? 6 RA N N ? 6 SA N N ? 6 TA N N ? 6 UA N N ? 6 VA N N ? 6 WA N N ? 6 XA N N ? 6 YA N N ? 6 ZA N N ? 6 AB N N ? 6 BB N N ? 6 CB N N ? 6 DB N N ? 6 EB N N ? 6 FB N N ? 6 GB N N ? 6 HB N N ? 6 IB N N ? 6 JB N N ? 6 KB N N ? 6 LB N N ? 6 MB N N ? 6 NB N N ? 6 OB N N ? 6 PB N N ? 6 QB N N ? 6 RB N N ? 6 SB N N ? 6 TB N N ? 6 UB N N ? 6 VB N N ? 6 WB N N ? 6 XB N N ? 6 YB N N ? 6 ZB N N ? 6 AC N N ? 6 BC N N ? 6 CC N N ? 6 DC N N ? 6 EC N N ? 6 FC N N ? 6 GC N N ? 6 HC N N ? 6 IC N N ? 6 JC N N ? 6 KC N N ? 6 LC N N ? 6 MC N N ? 6 NC N N ? 6 OC N N ? 6 PC N N ? 6 QC N N # _chem_comp.formula 'C33 H40 N4 O6' _chem_comp.formula_weight 588.694 _chem_comp.id CYC _chem_comp.mon_nstd_flag . _chem_comp.name PHYCOCYANOBILIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A CYC doub 70 z n CHA C4D CYC sing 71 n n CHA HHA CYC sing 72 n n NA C1A CYC sing 73 n n NA C4A CYC doub 74 n n C1A C2A CYC sing 75 n n C2A C3A CYC doub 76 n n C2A CAA CYC sing 77 n n C3A C4A CYC sing 78 n n C3A CMA CYC sing 79 n n C4A CHB CYC sing 80 n n CMA HMA1 CYC sing 81 n n CMA HMA2 CYC sing 82 n n CMA HMA3 CYC sing 83 n n CAA CBA CYC sing 84 n n CAA HAA1 CYC sing 85 n n CAA HAA2 CYC sing 86 n n CBA CGA CYC sing 87 n n CBA HBA1 CYC sing 88 n n CBA HBA2 CYC sing 89 n n CGA O1A CYC doub 90 n n CGA O2A CYC sing 91 n n O2A H2A CYC sing 92 n n CHB C1B CYC doub 93 z n CHB HHB CYC sing 94 n n NB C1B CYC sing 95 n n NB C4B CYC sing 96 n n NB HB CYC sing 97 n n C1B C2B CYC sing 98 n n C2B C3B CYC doub 99 n n C2B CMB CYC sing 100 n n C3B C4B CYC sing 101 n n C3B CAB CYC sing 102 n n C4B OB CYC doub 103 n n CMB HMB1 CYC sing 104 n n CMB HMB2 CYC sing 105 n n CMB HMB3 CYC sing 106 n n CAB CBB CYC sing 107 n n CAB HAB1 CYC sing 108 n n CAB HAB2 CYC sing 109 n n CBB HBB1 CYC sing 110 n n CBB HBB2 CYC sing 111 n n CBB HBB3 CYC sing 112 n n NC C1C CYC sing 113 n n NC C4C CYC sing 114 n n NC HC CYC sing 115 n n C1C C2C CYC sing 116 n n C1C OC CYC doub 117 n n C2C C3C CYC sing 118 n n C2C CMC CYC sing 119 n n C2C H2C CYC sing 120 n n C3C C4C CYC sing 121 n n C3C CAC CYC sing 122 n n C3C H3C CYC sing 123 n n C4C CHD CYC doub 124 z n CMC HMC1 CYC sing 125 n n CMC HMC2 CYC sing 126 n n CMC HMC3 CYC sing 127 n n CAC CBC CYC sing 128 n n CAC HAC1 CYC sing 129 n n CAC HAC2 CYC sing 130 n n CBC HBC1 CYC sing 131 n n CBC HBC2 CYC sing 132 n n CBC HBC3 CYC sing 133 n n CHD C1D CYC sing 134 n n CHD HHD CYC sing 135 n n ND C1D CYC sing 136 n y ND C4D CYC sing 137 n y ND HD CYC sing 138 n n C1D C2D CYC doub 139 n y C2D C3D CYC sing 140 n y C2D CMD CYC sing 141 n n C3D C4D CYC doub 142 n y C3D CAD CYC sing 143 n n CMD HMD1 CYC sing 144 n n CMD HMD2 CYC sing 145 n n CMD HMD3 CYC sing 146 n n CAD CBD CYC sing 147 n n CAD HAD1 CYC sing 148 n n CAD HAD2 CYC sing 149 n n CBD CGD CYC sing 150 n n CBD HBD1 CYC sing 151 n n CBD HBD2 CYC sing 152 n n CGD O1D CYC doub 153 n n CGD O2D CYC sing 154 n n O2D H2D CYC sing 155 n n # _atom_sites.entry_id 8IMM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code PA 6 CYC 3 1 601 200 CYC CYC . QA 6 CYC A 1 200 200 CYC CYC . RA 6 CYC A 1 201 201 CYC CYC . SA 6 CYC B 1 200 200 CYC CYC . TA 6 CYC B 1 201 201 CYC CYC . UA 6 CYC C 1 200 200 CYC CYC . VA 6 CYC D 1 200 200 CYC CYC . WA 6 CYC E 1 200 200 CYC CYC . XA 6 CYC F 1 200 200 CYC CYC . YA 6 CYC G 1 200 200 CYC CYC . ZA 6 CYC G 1 201 201 CYC CYC . AB 6 CYC H 1 200 200 CYC CYC . BB 6 CYC I 1 200 200 CYC CYC . CB 6 CYC I 1 201 201 CYC CYC . DB 6 CYC J 1 200 200 CYC CYC . EB 6 CYC K 1 200 200 CYC CYC . FB 6 CYC K 1 201 201 CYC CYC . GB 6 CYC L 1 201 201 CYC CYC . HB 6 CYC N 1 200 200 CYC CYC . IB 6 CYC O 1 200 200 CYC CYC . JB 6 CYC P 1 200 200 CYC CYC . KB 6 CYC Q 1 200 200 CYC CYC . LB 6 CYC R 1 200 200 CYC CYC . MB 6 CYC S 1 200 200 CYC CYC . NB 6 CYC T 1 200 200 CYC CYC . OB 6 CYC T 1 201 201 CYC CYC . PB 6 CYC U 1 200 200 CYC CYC . QB 6 CYC U 1 201 201 CYC CYC . RB 6 CYC V 1 200 200 CYC CYC . SB 6 CYC V 1 201 201 CYC CYC . TB 6 CYC W 1 200 200 CYC CYC . UB 6 CYC W 1 201 201 CYC CYC . VB 6 CYC X 1 200 200 CYC CYC . WB 6 CYC X 1 201 201 CYC CYC . XB 6 CYC Y 1 200 200 CYC CYC . YB 6 CYC Y 1 201 201 CYC CYC . ZB 6 CYC 4 1 301 200 CYC CYC . AC 6 CYC a 1 200 200 CYC CYC . BC 6 CYC b 1 200 200 CYC CYC . CC 6 CYC c 1 200 200 CYC CYC . DC 6 CYC d 1 200 200 CYC CYC . EC 6 CYC e 1 200 200 CYC CYC . FC 6 CYC f 1 200 200 CYC CYC . GC 6 CYC g 1 200 200 CYC CYC . HC 6 CYC g 1 201 201 CYC CYC . IC 6 CYC h 1 200 200 CYC CYC . JC 6 CYC h 1 201 201 CYC CYC . KC 6 CYC i 1 201 201 CYC CYC . LC 6 CYC j 1 200 200 CYC CYC . MC 6 CYC j 1 201 201 CYC CYC . NC 6 CYC k 1 200 200 CYC CYC . OC 6 CYC k 1 201 201 CYC CYC . PC 6 CYC l 1 200 200 CYC CYC . QC 6 CYC l 1 201 201 CYC CYC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA CYC . . . MC 6 271.179 424.039 502.86 1 71.53 ? CHA CYC 201 j 1 HETATM 2 N NA CYC . . . MC 6 272.773 425.918 503.63 1 71.53 ? NA CYC 201 j 1 HETATM 3 C C1A CYC . . . MC 6 271.603 425.318 503.648 1 71.53 ? C1A CYC 201 j 1 HETATM 4 C C2A CYC . . . MC 6 270.769 426.016 504.496 1 71.53 ? C2A CYC 201 j 1 HETATM 5 C C3A CYC . . . MC 6 271.513 427.079 504.998 1 71.53 ? C3A CYC 201 j 1 HETATM 6 C C4A CYC . . . MC 6 272.781 426.98 504.415 1 71.53 ? C4A CYC 201 j 1 HETATM 7 C CMA CYC . . . MC 6 270.95 428.113 506.004 1 71.53 ? CMA CYC 201 j 1 HETATM 8 C CAA CYC . . . MC 6 269.298 425.668 504.825 1 71.53 ? CAA CYC 201 j 1 HETATM 9 C CBA CYC . . . MC 6 269.196 424.44 505.81 1 71.53 ? CBA CYC 201 j 1 HETATM 10 C CGA CYC . . . MC 6 268.974 424.89 507.321 1 71.53 ? CGA CYC 201 j 1 HETATM 11 O O1A CYC . . . MC 6 268.988 426.129 507.63 1 71.53 ? O1A CYC 201 j 1 HETATM 12 O O2A CYC . . . MC 6 268.776 424.009 508.228 1 71.53 ? O2A CYC 201 j 1 HETATM 13 C CHB CYC . . . MC 6 274.114 427.888 504.581 1 71.53 ? CHB CYC 201 j 1 HETATM 14 N NB CYC . . . MC 6 273.036 430.109 505.12 1 71.53 ? NB CYC 201 j 1 HETATM 15 C C1B CYC . . . MC 6 274.005 429.247 505.234 1 71.53 ? C1B CYC 201 j 1 HETATM 16 C C2B CYC . . . MC 6 274.965 429.787 506.043 1 71.53 ? C2B CYC 201 j 1 HETATM 17 C C3B CYC . . . MC 6 274.506 431.032 506.425 1 71.53 ? C3B CYC 201 j 1 HETATM 18 C C4B CYC . . . MC 6 273.292 431.187 505.83 1 71.53 ? C4B CYC 201 j 1 HETATM 19 C CMB CYC . . . MC 6 276.287 429.15 506.453 1 71.53 ? CMB CYC 201 j 1 HETATM 20 C CAB CYC . . . MC 6 275.24 432.065 507.369 1 71.53 ? CAB CYC 201 j 1 HETATM 21 C CBB CYC . . . MC 6 274.81 431.913 508.802 1 71.53 ? CBB CYC 201 j 1 HETATM 22 O OB CYC . . . MC 6 272.447 432.348 505.947 1 71.53 ? OB CYC 201 j 1 HETATM 23 N NC CYC . . . MC 6 276.518 420.899 499.807 1 71.53 ? NC CYC 201 j 1 HETATM 24 C C1C CYC . . . MC 6 277.583 419.845 500.07 1 71.53 ? C1C CYC 201 j 1 HETATM 25 C C2C CYC . . . MC 6 278.719 420.67 500.901 1 71.53 ? C2C CYC 201 j 1 HETATM 26 C C3C CYC . . . MC 6 278.149 421.723 501.311 1 71.53 ? C3C CYC 201 j 1 HETATM 27 C C4C CYC . . . MC 6 276.506 421.541 500.969 1 71.53 ? C4C CYC 201 j 1 HETATM 28 C CMC CYC . . . MC 6 279.202 419.805 502.162 1 71.53 ? CMC CYC 201 j 1 HETATM 29 C CAC CYC . . . MC 6 278.725 423.021 500.601 1 71.53 ? CAC CYC 201 j 1 HETATM 30 C CBC CYC . . . MC 6 280.059 422.807 499.84 1 71.53 ? CBC CYC 201 j 1 HETATM 31 O OC CYC . . . MC 6 277.104 418.938 500.789 1 71.53 ? OC CYC 201 j 1 HETATM 32 C CHD CYC . . . MC 6 275.852 422.889 500.836 1 71.53 ? CHD CYC 201 j 1 HETATM 33 N ND CYC . . . MC 6 273.662 423.616 502.013 1 71.53 ? ND CYC 201 j 1 HETATM 34 C C1D CYC . . . MC 6 274.276 422.883 501.088 1 71.53 ? C1D CYC 201 j 1 HETATM 35 C C2D CYC . . . MC 6 273.293 422.16 500.378 1 71.53 ? C2D CYC 201 j 1 HETATM 36 C C3D CYC . . . MC 6 272.071 422.494 500.947 1 71.53 ? C3D CYC 201 j 1 HETATM 37 C C4D CYC . . . MC 6 272.345 423.405 501.958 1 71.53 ? C4D CYC 201 j 1 HETATM 38 C CMD CYC . . . MC 6 273.45 421.154 499.193 1 71.53 ? CMD CYC 201 j 1 HETATM 39 C CAD CYC . . . MC 6 270.686 421.979 500.548 1 71.53 ? CAD CYC 201 j 1 HETATM 40 C CBD CYC . . . MC 6 270.086 422.811 499.399 1 71.53 ? CBD CYC 201 j 1 HETATM 41 C CGD CYC . . . MC 6 269.764 421.944 498.168 1 71.53 ? CGD CYC 201 j 1 HETATM 42 O O1D CYC . . . MC 6 270.661 421.71 497.309 1 71.53 ? O1D CYC 201 j 1 HETATM 43 O O2D CYC . . . MC 6 268.621 421.474 498.017 1 71.53 ? O2D CYC 201 j 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 51 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #