data_8IMR # _model_server_result.job_id C9veY9Ecf4Q_cFzAFViIXQ _model_server_result.datetime_utc '2025-01-10 07:41:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8imr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 8IMR # _exptl.entry_id 8IMR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IMR _cell.length_a 67.745 _cell.length_b 68.471 _cell.length_c 88.791 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IMR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 8IMR _atom_sites.fract_transf_matrix[1][1] 0.014761 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014605 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 201 1 SO4 SO4 . E 3 EDO A 1 202 2 EDO EDO . F 3 EDO A 1 203 5 EDO EDO . G 2 SO4 B 1 201 2 SO4 SO4 . H 3 EDO B 1 202 1 EDO EDO . I 3 EDO C 1 201 3 EDO EDO . J 3 EDO C 1 202 4 EDO EDO . K 3 EDO C 1 203 6 EDO EDO . L 4 IPA C 1 204 1 IPA IPA . M 4 IPA C 1 205 2 IPA IPA . N 4 IPA C 1 206 3 IPA IPA . O 5 HOH A 1 301 48 HOH HOH . O 5 HOH A 2 302 289 HOH HOH . O 5 HOH A 3 303 260 HOH HOH . O 5 HOH A 4 304 108 HOH HOH . O 5 HOH A 5 305 141 HOH HOH . O 5 HOH A 6 306 111 HOH HOH . O 5 HOH A 7 307 205 HOH HOH . O 5 HOH A 8 308 128 HOH HOH . O 5 HOH A 9 309 257 HOH HOH . O 5 HOH A 10 310 82 HOH HOH . O 5 HOH A 11 311 31 HOH HOH . O 5 HOH A 12 312 57 HOH HOH . O 5 HOH A 13 313 12 HOH HOH . O 5 HOH A 14 314 109 HOH HOH . O 5 HOH A 15 315 6 HOH HOH . O 5 HOH A 16 316 120 HOH HOH . O 5 HOH A 17 317 7 HOH HOH . O 5 HOH A 18 318 148 HOH HOH . O 5 HOH A 19 319 40 HOH HOH . O 5 HOH A 20 320 116 HOH HOH . O 5 HOH A 21 321 84 HOH HOH . O 5 HOH A 22 322 168 HOH HOH . O 5 HOH A 23 323 8 HOH HOH . O 5 HOH A 24 324 193 HOH HOH . O 5 HOH A 25 325 146 HOH HOH . O 5 HOH A 26 326 217 HOH HOH . O 5 HOH A 27 327 65 HOH HOH . O 5 HOH A 28 328 10 HOH HOH . O 5 HOH A 29 329 20 HOH HOH . O 5 HOH A 30 330 13 HOH HOH . O 5 HOH A 31 331 153 HOH HOH . O 5 HOH A 32 332 229 HOH HOH . O 5 HOH A 33 333 60 HOH HOH . O 5 HOH A 34 334 181 HOH HOH . O 5 HOH A 35 335 44 HOH HOH . O 5 HOH A 36 336 2 HOH HOH . O 5 HOH A 37 337 99 HOH HOH . O 5 HOH A 38 338 75 HOH HOH . O 5 HOH A 39 339 162 HOH HOH . O 5 HOH A 40 340 54 HOH HOH . O 5 HOH A 41 341 195 HOH HOH . O 5 HOH A 42 342 199 HOH HOH . O 5 HOH A 43 343 160 HOH HOH . O 5 HOH A 44 344 61 HOH HOH . O 5 HOH A 45 345 259 HOH HOH . O 5 HOH A 46 346 280 HOH HOH . O 5 HOH A 47 347 238 HOH HOH . O 5 HOH A 48 348 83 HOH HOH . O 5 HOH A 49 349 67 HOH HOH . O 5 HOH A 50 350 137 HOH HOH . O 5 HOH A 51 351 138 HOH HOH . O 5 HOH A 52 352 76 HOH HOH . O 5 HOH A 53 353 269 HOH HOH . O 5 HOH A 54 354 25 HOH HOH . O 5 HOH A 55 355 110 HOH HOH . O 5 HOH A 56 356 122 HOH HOH . O 5 HOH A 57 357 104 HOH HOH . O 5 HOH A 58 358 15 HOH HOH . O 5 HOH A 59 359 36 HOH HOH . O 5 HOH A 60 360 74 HOH HOH . O 5 HOH A 61 361 33 HOH HOH . O 5 HOH A 62 362 127 HOH HOH . O 5 HOH A 63 363 227 HOH HOH . O 5 HOH A 64 364 51 HOH HOH . O 5 HOH A 65 365 277 HOH HOH . O 5 HOH A 66 366 178 HOH HOH . O 5 HOH A 67 367 152 HOH HOH . O 5 HOH A 68 368 4 HOH HOH . O 5 HOH A 69 369 78 HOH HOH . O 5 HOH A 70 370 220 HOH HOH . O 5 HOH A 71 371 37 HOH HOH . O 5 HOH A 72 372 179 HOH HOH . O 5 HOH A 73 373 69 HOH HOH . O 5 HOH A 74 374 234 HOH HOH . O 5 HOH A 75 375 248 HOH HOH . O 5 HOH A 76 376 201 HOH HOH . O 5 HOH A 77 377 223 HOH HOH . O 5 HOH A 78 378 100 HOH HOH . O 5 HOH A 79 379 245 HOH HOH . O 5 HOH A 80 380 246 HOH HOH . O 5 HOH A 81 381 204 HOH HOH . O 5 HOH A 82 382 200 HOH HOH . O 5 HOH A 83 383 96 HOH HOH . O 5 HOH A 84 384 256 HOH HOH . O 5 HOH A 85 385 286 HOH HOH . O 5 HOH A 86 386 170 HOH HOH . O 5 HOH A 87 387 155 HOH HOH . O 5 HOH A 88 388 23 HOH HOH . O 5 HOH A 89 389 91 HOH HOH . O 5 HOH A 90 390 251 HOH HOH . O 5 HOH A 91 391 90 HOH HOH . O 5 HOH A 92 392 284 HOH HOH . O 5 HOH A 93 393 142 HOH HOH . O 5 HOH A 94 394 196 HOH HOH . O 5 HOH A 95 395 282 HOH HOH . O 5 HOH A 96 396 107 HOH HOH . O 5 HOH A 97 397 221 HOH HOH . O 5 HOH A 98 398 279 HOH HOH . O 5 HOH A 99 399 211 HOH HOH . O 5 HOH A 100 400 114 HOH HOH . O 5 HOH A 101 401 172 HOH HOH . O 5 HOH A 102 402 209 HOH HOH . O 5 HOH A 103 403 219 HOH HOH . O 5 HOH A 104 404 117 HOH HOH . P 5 HOH B 1 301 212 HOH HOH . P 5 HOH B 2 302 103 HOH HOH . P 5 HOH B 3 303 93 HOH HOH . P 5 HOH B 4 304 56 HOH HOH . P 5 HOH B 5 305 97 HOH HOH . P 5 HOH B 6 306 225 HOH HOH . P 5 HOH B 7 307 113 HOH HOH . P 5 HOH B 8 308 239 HOH HOH . P 5 HOH B 9 309 98 HOH HOH . P 5 HOH B 10 310 126 HOH HOH . P 5 HOH B 11 311 249 HOH HOH . P 5 HOH B 12 312 32 HOH HOH . P 5 HOH B 13 313 176 HOH HOH . P 5 HOH B 14 314 136 HOH HOH . P 5 HOH B 15 315 101 HOH HOH . P 5 HOH B 16 316 11 HOH HOH . P 5 HOH B 17 317 102 HOH HOH . P 5 HOH B 18 318 24 HOH HOH . P 5 HOH B 19 319 144 HOH HOH . P 5 HOH B 20 320 59 HOH HOH . P 5 HOH B 21 321 55 HOH HOH . P 5 HOH B 22 322 42 HOH HOH . P 5 HOH B 23 323 139 HOH HOH . P 5 HOH B 24 324 45 HOH HOH . P 5 HOH B 25 325 38 HOH HOH . P 5 HOH B 26 326 87 HOH HOH . P 5 HOH B 27 327 16 HOH HOH . P 5 HOH B 28 328 77 HOH HOH . P 5 HOH B 29 329 28 HOH HOH . P 5 HOH B 30 330 186 HOH HOH . P 5 HOH B 31 331 254 HOH HOH . P 5 HOH B 32 332 158 HOH HOH . P 5 HOH B 33 333 151 HOH HOH . P 5 HOH B 34 334 191 HOH HOH . P 5 HOH B 35 335 241 HOH HOH . P 5 HOH B 36 336 88 HOH HOH . P 5 HOH B 37 337 236 HOH HOH . P 5 HOH B 38 338 123 HOH HOH . P 5 HOH B 39 339 1 HOH HOH . P 5 HOH B 40 340 233 HOH HOH . P 5 HOH B 41 341 167 HOH HOH . P 5 HOH B 42 342 85 HOH HOH . P 5 HOH B 43 343 281 HOH HOH . P 5 HOH B 44 344 130 HOH HOH . P 5 HOH B 45 345 265 HOH HOH . P 5 HOH B 46 346 190 HOH HOH . P 5 HOH B 47 347 150 HOH HOH . P 5 HOH B 48 348 3 HOH HOH . P 5 HOH B 49 349 39 HOH HOH . P 5 HOH B 50 350 207 HOH HOH . P 5 HOH B 51 351 26 HOH HOH . P 5 HOH B 52 352 231 HOH HOH . P 5 HOH B 53 353 49 HOH HOH . P 5 HOH B 54 354 210 HOH HOH . P 5 HOH B 55 355 228 HOH HOH . P 5 HOH B 56 356 14 HOH HOH . P 5 HOH B 57 357 177 HOH HOH . P 5 HOH B 58 358 17 HOH HOH . P 5 HOH B 59 359 243 HOH HOH . P 5 HOH B 60 360 70 HOH HOH . P 5 HOH B 61 361 9 HOH HOH . P 5 HOH B 62 362 242 HOH HOH . P 5 HOH B 63 363 147 HOH HOH . P 5 HOH B 64 364 203 HOH HOH . P 5 HOH B 65 365 184 HOH HOH . P 5 HOH B 66 366 52 HOH HOH . P 5 HOH B 67 367 58 HOH HOH . P 5 HOH B 68 368 35 HOH HOH . P 5 HOH B 69 369 63 HOH HOH . P 5 HOH B 70 370 244 HOH HOH . P 5 HOH B 71 371 27 HOH HOH . P 5 HOH B 72 372 112 HOH HOH . P 5 HOH B 73 373 255 HOH HOH . P 5 HOH B 74 374 194 HOH HOH . P 5 HOH B 75 375 166 HOH HOH . P 5 HOH B 76 376 262 HOH HOH . P 5 HOH B 77 377 68 HOH HOH . P 5 HOH B 78 378 268 HOH HOH . P 5 HOH B 79 379 95 HOH HOH . P 5 HOH B 80 380 135 HOH HOH . P 5 HOH B 81 381 214 HOH HOH . P 5 HOH B 82 382 272 HOH HOH . P 5 HOH B 83 383 185 HOH HOH . P 5 HOH B 84 384 215 HOH HOH . P 5 HOH B 85 385 164 HOH HOH . P 5 HOH B 86 386 287 HOH HOH . P 5 HOH B 87 387 197 HOH HOH . P 5 HOH B 88 388 29 HOH HOH . P 5 HOH B 89 389 145 HOH HOH . P 5 HOH B 90 390 163 HOH HOH . P 5 HOH B 91 391 189 HOH HOH . P 5 HOH B 92 392 237 HOH HOH . P 5 HOH B 93 393 169 HOH HOH . P 5 HOH B 94 394 106 HOH HOH . P 5 HOH B 95 395 288 HOH HOH . P 5 HOH B 96 396 224 HOH HOH . P 5 HOH B 97 397 171 HOH HOH . P 5 HOH B 98 398 22 HOH HOH . P 5 HOH B 99 399 115 HOH HOH . P 5 HOH B 100 400 274 HOH HOH . P 5 HOH B 101 401 180 HOH HOH . P 5 HOH B 102 402 216 HOH HOH . Q 5 HOH C 1 301 240 HOH HOH . Q 5 HOH C 2 302 232 HOH HOH . Q 5 HOH C 3 303 173 HOH HOH . Q 5 HOH C 4 304 46 HOH HOH . Q 5 HOH C 5 305 253 HOH HOH . Q 5 HOH C 6 306 154 HOH HOH . Q 5 HOH C 7 307 174 HOH HOH . Q 5 HOH C 8 308 71 HOH HOH . Q 5 HOH C 9 309 188 HOH HOH . Q 5 HOH C 10 310 159 HOH HOH . Q 5 HOH C 11 311 182 HOH HOH . Q 5 HOH C 12 312 132 HOH HOH . Q 5 HOH C 13 313 187 HOH HOH . Q 5 HOH C 14 314 66 HOH HOH . Q 5 HOH C 15 315 270 HOH HOH . Q 5 HOH C 16 316 156 HOH HOH . Q 5 HOH C 17 317 125 HOH HOH . Q 5 HOH C 18 318 92 HOH HOH . Q 5 HOH C 19 319 121 HOH HOH . Q 5 HOH C 20 320 165 HOH HOH . Q 5 HOH C 21 321 5 HOH HOH . Q 5 HOH C 22 322 30 HOH HOH . Q 5 HOH C 23 323 198 HOH HOH . Q 5 HOH C 24 324 133 HOH HOH . Q 5 HOH C 25 325 34 HOH HOH . Q 5 HOH C 26 326 118 HOH HOH . Q 5 HOH C 27 327 62 HOH HOH . Q 5 HOH C 28 328 261 HOH HOH . Q 5 HOH C 29 329 263 HOH HOH . Q 5 HOH C 30 330 81 HOH HOH . Q 5 HOH C 31 331 41 HOH HOH . Q 5 HOH C 32 332 94 HOH HOH . Q 5 HOH C 33 333 47 HOH HOH . Q 5 HOH C 34 334 252 HOH HOH . Q 5 HOH C 35 335 192 HOH HOH . Q 5 HOH C 36 336 161 HOH HOH . Q 5 HOH C 37 337 250 HOH HOH . Q 5 HOH C 38 338 86 HOH HOH . Q 5 HOH C 39 339 140 HOH HOH . Q 5 HOH C 40 340 175 HOH HOH . Q 5 HOH C 41 341 143 HOH HOH . Q 5 HOH C 42 342 290 HOH HOH . Q 5 HOH C 43 343 226 HOH HOH . Q 5 HOH C 44 344 21 HOH HOH . Q 5 HOH C 45 345 18 HOH HOH . Q 5 HOH C 46 346 247 HOH HOH . Q 5 HOH C 47 347 230 HOH HOH . Q 5 HOH C 48 348 50 HOH HOH . Q 5 HOH C 49 349 73 HOH HOH . Q 5 HOH C 50 350 19 HOH HOH . Q 5 HOH C 51 351 53 HOH HOH . Q 5 HOH C 52 352 283 HOH HOH . Q 5 HOH C 53 353 266 HOH HOH . Q 5 HOH C 54 354 124 HOH HOH . Q 5 HOH C 55 355 157 HOH HOH . Q 5 HOH C 56 356 222 HOH HOH . Q 5 HOH C 57 357 119 HOH HOH . Q 5 HOH C 58 358 72 HOH HOH . Q 5 HOH C 59 359 80 HOH HOH . Q 5 HOH C 60 360 89 HOH HOH . Q 5 HOH C 61 361 105 HOH HOH . Q 5 HOH C 62 362 271 HOH HOH . Q 5 HOH C 63 363 202 HOH HOH . Q 5 HOH C 64 364 79 HOH HOH . Q 5 HOH C 65 365 213 HOH HOH . Q 5 HOH C 66 366 131 HOH HOH . Q 5 HOH C 67 367 206 HOH HOH . Q 5 HOH C 68 368 276 HOH HOH . Q 5 HOH C 69 369 235 HOH HOH . Q 5 HOH C 70 370 264 HOH HOH . Q 5 HOH C 71 371 275 HOH HOH . Q 5 HOH C 72 372 43 HOH HOH . Q 5 HOH C 73 373 258 HOH HOH . Q 5 HOH C 74 374 64 HOH HOH . Q 5 HOH C 75 375 149 HOH HOH . Q 5 HOH C 76 376 208 HOH HOH . Q 5 HOH C 77 377 278 HOH HOH . Q 5 HOH C 78 378 129 HOH HOH . Q 5 HOH C 79 379 183 HOH HOH . Q 5 HOH C 80 380 273 HOH HOH . Q 5 HOH C 81 381 285 HOH HOH . Q 5 HOH C 82 382 267 HOH HOH . Q 5 HOH C 83 383 134 HOH HOH . Q 5 HOH C 84 384 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 -1.983 15.08 -6.205 1 25.42 ? C1 EDO 202 A 1 HETATM 2 O O1 EDO . . . E 3 -2.5 16.038 -7.13 1 29.54 ? O1 EDO 202 A 1 HETATM 3 C C2 EDO . . . E 3 -1.495 13.855 -6.968 1 21.08 ? C2 EDO 202 A 1 HETATM 4 O O2 EDO . . . E 3 -2.57 13.258 -7.696 1 17.42 ? O2 EDO 202 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #