data_8IND # _model_server_result.job_id vuHVi2w8fNshHHMNycwvmg _model_server_result.datetime_utc '2025-02-16 16:31:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ind # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 8IND # _exptl.entry_id 8IND _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8IND _cell.length_a 45.995 _cell.length_b 52.911 _cell.length_c 201.119 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8IND _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 399 n n C C2 TRS sing 400 n n C C3 TRS sing 401 n n C N TRS sing 402 n n C1 O1 TRS sing 403 n n C1 H11 TRS sing 404 n n C1 H12 TRS sing 405 n n C2 O2 TRS sing 406 n n C2 H21 TRS sing 407 n n C2 H22 TRS sing 408 n n C3 O3 TRS sing 409 n n C3 H31 TRS sing 410 n n C3 H32 TRS sing 411 n n N HN1 TRS sing 412 n n N HN2 TRS sing 413 n n N HN3 TRS sing 414 n n O1 HO1 TRS sing 415 n n O2 HO2 TRS sing 416 n n O3 HO3 TRS sing 417 n n # _atom_sites.entry_id 8IND _atom_sites.fract_transf_matrix[1][1] 0.021741 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0189 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004972 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6JI A 1 501 502 6JI DRG . C 3 UDP A 1 502 503 UDP UDP . D 4 TRS A 1 503 504 TRS TRS . E 5 HOH A 1 601 146 HOH HOH . E 5 HOH A 2 602 168 HOH HOH . E 5 HOH A 3 603 94 HOH HOH . E 5 HOH A 4 604 28 HOH HOH . E 5 HOH A 5 605 187 HOH HOH . E 5 HOH A 6 606 235 HOH HOH . E 5 HOH A 7 607 145 HOH HOH . E 5 HOH A 8 608 40 HOH HOH . E 5 HOH A 9 609 293 HOH HOH . E 5 HOH A 10 610 114 HOH HOH . E 5 HOH A 11 611 208 HOH HOH . E 5 HOH A 12 612 121 HOH HOH . E 5 HOH A 13 613 217 HOH HOH . E 5 HOH A 14 614 79 HOH HOH . E 5 HOH A 15 615 54 HOH HOH . E 5 HOH A 16 616 285 HOH HOH . E 5 HOH A 17 617 48 HOH HOH . E 5 HOH A 18 618 191 HOH HOH . E 5 HOH A 19 619 56 HOH HOH . E 5 HOH A 20 620 8 HOH HOH . E 5 HOH A 21 621 245 HOH HOH . E 5 HOH A 22 622 29 HOH HOH . E 5 HOH A 23 623 73 HOH HOH . E 5 HOH A 24 624 23 HOH HOH . E 5 HOH A 25 625 107 HOH HOH . E 5 HOH A 26 626 74 HOH HOH . E 5 HOH A 27 627 76 HOH HOH . E 5 HOH A 28 628 259 HOH HOH . E 5 HOH A 29 629 120 HOH HOH . E 5 HOH A 30 630 46 HOH HOH . E 5 HOH A 31 631 85 HOH HOH . E 5 HOH A 32 632 9 HOH HOH . E 5 HOH A 33 633 71 HOH HOH . E 5 HOH A 34 634 41 HOH HOH . E 5 HOH A 35 635 165 HOH HOH . E 5 HOH A 36 636 112 HOH HOH . E 5 HOH A 37 637 24 HOH HOH . E 5 HOH A 38 638 20 HOH HOH . E 5 HOH A 39 639 103 HOH HOH . E 5 HOH A 40 640 154 HOH HOH . E 5 HOH A 41 641 95 HOH HOH . E 5 HOH A 42 642 61 HOH HOH . E 5 HOH A 43 643 22 HOH HOH . E 5 HOH A 44 644 36 HOH HOH . E 5 HOH A 45 645 19 HOH HOH . E 5 HOH A 46 646 239 HOH HOH . E 5 HOH A 47 647 1 HOH HOH . E 5 HOH A 48 648 236 HOH HOH . E 5 HOH A 49 649 49 HOH HOH . E 5 HOH A 50 650 17 HOH HOH . E 5 HOH A 51 651 57 HOH HOH . E 5 HOH A 52 652 33 HOH HOH . E 5 HOH A 53 653 11 HOH HOH . E 5 HOH A 54 654 105 HOH HOH . E 5 HOH A 55 655 108 HOH HOH . E 5 HOH A 56 656 87 HOH HOH . E 5 HOH A 57 657 2 HOH HOH . E 5 HOH A 58 658 7 HOH HOH . E 5 HOH A 59 659 148 HOH HOH . E 5 HOH A 60 660 25 HOH HOH . E 5 HOH A 61 661 215 HOH HOH . E 5 HOH A 62 662 126 HOH HOH . E 5 HOH A 63 663 299 HOH HOH . E 5 HOH A 64 664 250 HOH HOH . E 5 HOH A 65 665 77 HOH HOH . E 5 HOH A 66 666 101 HOH HOH . E 5 HOH A 67 667 38 HOH HOH . E 5 HOH A 68 668 90 HOH HOH . E 5 HOH A 69 669 75 HOH HOH . E 5 HOH A 70 670 124 HOH HOH . E 5 HOH A 71 671 132 HOH HOH . E 5 HOH A 72 672 16 HOH HOH . E 5 HOH A 73 673 91 HOH HOH . E 5 HOH A 74 674 12 HOH HOH . E 5 HOH A 75 675 32 HOH HOH . E 5 HOH A 76 676 186 HOH HOH . E 5 HOH A 77 677 117 HOH HOH . E 5 HOH A 78 678 233 HOH HOH . E 5 HOH A 79 679 5 HOH HOH . E 5 HOH A 80 680 4 HOH HOH . E 5 HOH A 81 681 27 HOH HOH . E 5 HOH A 82 682 258 HOH HOH . E 5 HOH A 83 683 226 HOH HOH . E 5 HOH A 84 684 58 HOH HOH . E 5 HOH A 85 685 84 HOH HOH . E 5 HOH A 86 686 277 HOH HOH . E 5 HOH A 87 687 89 HOH HOH . E 5 HOH A 88 688 139 HOH HOH . E 5 HOH A 89 689 262 HOH HOH . E 5 HOH A 90 690 51 HOH HOH . E 5 HOH A 91 691 118 HOH HOH . E 5 HOH A 92 692 222 HOH HOH . E 5 HOH A 93 693 6 HOH HOH . E 5 HOH A 94 694 170 HOH HOH . E 5 HOH A 95 695 13 HOH HOH . E 5 HOH A 96 696 135 HOH HOH . E 5 HOH A 97 697 252 HOH HOH . E 5 HOH A 98 698 59 HOH HOH . E 5 HOH A 99 699 157 HOH HOH . E 5 HOH A 100 700 273 HOH HOH . E 5 HOH A 101 701 31 HOH HOH . E 5 HOH A 102 702 221 HOH HOH . E 5 HOH A 103 703 15 HOH HOH . E 5 HOH A 104 704 10 HOH HOH . E 5 HOH A 105 705 241 HOH HOH . E 5 HOH A 106 706 195 HOH HOH . E 5 HOH A 107 707 246 HOH HOH . E 5 HOH A 108 708 156 HOH HOH . E 5 HOH A 109 709 100 HOH HOH . E 5 HOH A 110 710 182 HOH HOH . E 5 HOH A 111 711 209 HOH HOH . E 5 HOH A 112 712 153 HOH HOH . E 5 HOH A 113 713 123 HOH HOH . E 5 HOH A 114 714 177 HOH HOH . E 5 HOH A 115 715 260 HOH HOH . E 5 HOH A 116 716 65 HOH HOH . E 5 HOH A 117 717 134 HOH HOH . E 5 HOH A 118 718 43 HOH HOH . E 5 HOH A 119 719 119 HOH HOH . E 5 HOH A 120 720 263 HOH HOH . E 5 HOH A 121 721 190 HOH HOH . E 5 HOH A 122 722 122 HOH HOH . E 5 HOH A 123 723 111 HOH HOH . E 5 HOH A 124 724 138 HOH HOH . E 5 HOH A 125 725 127 HOH HOH . E 5 HOH A 126 726 279 HOH HOH . E 5 HOH A 127 727 128 HOH HOH . E 5 HOH A 128 728 257 HOH HOH . E 5 HOH A 129 729 96 HOH HOH . E 5 HOH A 130 730 266 HOH HOH . E 5 HOH A 131 731 14 HOH HOH . E 5 HOH A 132 732 45 HOH HOH . E 5 HOH A 133 733 64 HOH HOH . E 5 HOH A 134 734 173 HOH HOH . E 5 HOH A 135 735 80 HOH HOH . E 5 HOH A 136 736 143 HOH HOH . E 5 HOH A 137 737 67 HOH HOH . E 5 HOH A 138 738 68 HOH HOH . E 5 HOH A 139 739 70 HOH HOH . E 5 HOH A 140 740 82 HOH HOH . E 5 HOH A 141 741 243 HOH HOH . E 5 HOH A 142 742 39 HOH HOH . E 5 HOH A 143 743 152 HOH HOH . E 5 HOH A 144 744 99 HOH HOH . E 5 HOH A 145 745 151 HOH HOH . E 5 HOH A 146 746 52 HOH HOH . E 5 HOH A 147 747 78 HOH HOH . E 5 HOH A 148 748 104 HOH HOH . E 5 HOH A 149 749 213 HOH HOH . E 5 HOH A 150 750 297 HOH HOH . E 5 HOH A 151 751 192 HOH HOH . E 5 HOH A 152 752 267 HOH HOH . E 5 HOH A 153 753 161 HOH HOH . E 5 HOH A 154 754 180 HOH HOH . E 5 HOH A 155 755 102 HOH HOH . E 5 HOH A 156 756 53 HOH HOH . E 5 HOH A 157 757 30 HOH HOH . E 5 HOH A 158 758 291 HOH HOH . E 5 HOH A 159 759 63 HOH HOH . E 5 HOH A 160 760 18 HOH HOH . E 5 HOH A 161 761 98 HOH HOH . E 5 HOH A 162 762 92 HOH HOH . E 5 HOH A 163 763 69 HOH HOH . E 5 HOH A 164 764 229 HOH HOH . E 5 HOH A 165 765 275 HOH HOH . E 5 HOH A 166 766 211 HOH HOH . E 5 HOH A 167 767 47 HOH HOH . E 5 HOH A 168 768 200 HOH HOH . E 5 HOH A 169 769 166 HOH HOH . E 5 HOH A 170 770 44 HOH HOH . E 5 HOH A 171 771 88 HOH HOH . E 5 HOH A 172 772 205 HOH HOH . E 5 HOH A 173 773 97 HOH HOH . E 5 HOH A 174 774 295 HOH HOH . E 5 HOH A 175 775 183 HOH HOH . E 5 HOH A 176 776 155 HOH HOH . E 5 HOH A 177 777 93 HOH HOH . E 5 HOH A 178 778 141 HOH HOH . E 5 HOH A 179 779 21 HOH HOH . E 5 HOH A 180 780 253 HOH HOH . E 5 HOH A 181 781 81 HOH HOH . E 5 HOH A 182 782 254 HOH HOH . E 5 HOH A 183 783 106 HOH HOH . E 5 HOH A 184 784 283 HOH HOH . E 5 HOH A 185 785 50 HOH HOH . E 5 HOH A 186 786 251 HOH HOH . E 5 HOH A 187 787 149 HOH HOH . E 5 HOH A 188 788 3 HOH HOH . E 5 HOH A 189 789 62 HOH HOH . E 5 HOH A 190 790 234 HOH HOH . E 5 HOH A 191 791 216 HOH HOH . E 5 HOH A 192 792 171 HOH HOH . E 5 HOH A 193 793 249 HOH HOH . E 5 HOH A 194 794 150 HOH HOH . E 5 HOH A 195 795 34 HOH HOH . E 5 HOH A 196 796 163 HOH HOH . E 5 HOH A 197 797 115 HOH HOH . E 5 HOH A 198 798 158 HOH HOH . E 5 HOH A 199 799 26 HOH HOH . E 5 HOH A 200 800 294 HOH HOH . E 5 HOH A 201 801 181 HOH HOH . E 5 HOH A 202 802 129 HOH HOH . E 5 HOH A 203 803 175 HOH HOH . E 5 HOH A 204 804 248 HOH HOH . E 5 HOH A 205 805 130 HOH HOH . E 5 HOH A 206 806 278 HOH HOH . E 5 HOH A 207 807 197 HOH HOH . E 5 HOH A 208 808 133 HOH HOH . E 5 HOH A 209 809 290 HOH HOH . E 5 HOH A 210 810 136 HOH HOH . E 5 HOH A 211 811 60 HOH HOH . E 5 HOH A 212 812 281 HOH HOH . E 5 HOH A 213 813 42 HOH HOH . E 5 HOH A 214 814 116 HOH HOH . E 5 HOH A 215 815 164 HOH HOH . E 5 HOH A 216 816 223 HOH HOH . E 5 HOH A 217 817 292 HOH HOH . E 5 HOH A 218 818 113 HOH HOH . E 5 HOH A 219 819 287 HOH HOH . E 5 HOH A 220 820 265 HOH HOH . E 5 HOH A 221 821 204 HOH HOH . E 5 HOH A 222 822 244 HOH HOH . E 5 HOH A 223 823 228 HOH HOH . E 5 HOH A 224 824 300 HOH HOH . E 5 HOH A 225 825 184 HOH HOH . E 5 HOH A 226 826 189 HOH HOH . E 5 HOH A 227 827 286 HOH HOH . E 5 HOH A 228 828 269 HOH HOH . E 5 HOH A 229 829 271 HOH HOH . E 5 HOH A 230 830 167 HOH HOH . E 5 HOH A 231 831 227 HOH HOH . E 5 HOH A 232 832 280 HOH HOH . E 5 HOH A 233 833 193 HOH HOH . E 5 HOH A 234 834 160 HOH HOH . E 5 HOH A 235 835 242 HOH HOH . E 5 HOH A 236 836 185 HOH HOH . E 5 HOH A 237 837 270 HOH HOH . E 5 HOH A 238 838 224 HOH HOH . E 5 HOH A 239 839 194 HOH HOH . E 5 HOH A 240 840 110 HOH HOH . E 5 HOH A 241 841 72 HOH HOH . E 5 HOH A 242 842 231 HOH HOH . E 5 HOH A 243 843 206 HOH HOH . E 5 HOH A 244 844 109 HOH HOH . E 5 HOH A 245 845 207 HOH HOH . E 5 HOH A 246 846 203 HOH HOH . E 5 HOH A 247 847 282 HOH HOH . E 5 HOH A 248 848 288 HOH HOH . E 5 HOH A 249 849 178 HOH HOH . E 5 HOH A 250 850 35 HOH HOH . E 5 HOH A 251 851 268 HOH HOH . E 5 HOH A 252 852 147 HOH HOH . E 5 HOH A 253 853 261 HOH HOH . E 5 HOH A 254 854 131 HOH HOH . E 5 HOH A 255 855 289 HOH HOH . E 5 HOH A 256 856 125 HOH HOH . E 5 HOH A 257 857 188 HOH HOH . E 5 HOH A 258 858 238 HOH HOH . E 5 HOH A 259 859 198 HOH HOH . E 5 HOH A 260 860 232 HOH HOH . E 5 HOH A 261 861 284 HOH HOH . E 5 HOH A 262 862 298 HOH HOH . E 5 HOH A 263 863 201 HOH HOH . E 5 HOH A 264 864 276 HOH HOH . E 5 HOH A 265 865 296 HOH HOH . E 5 HOH A 266 866 255 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 4 -12.163 23.862 73.215 1 29.57 ? C TRS 503 A 1 HETATM 2 C C1 TRS . . . D 4 -12.145 24.863 72.055 1 31.04 ? C1 TRS 503 A 1 HETATM 3 C C2 TRS . . . D 4 -11.371 22.587 72.931 1 29.35 ? C2 TRS 503 A 1 HETATM 4 C C3 TRS . . . D 4 -13.615 23.458 73.487 1 25.8 ? C3 TRS 503 A 1 HETATM 5 N N TRS . . . D 4 -11.504 24.447 74.359 1 25.29 ? N TRS 503 A 1 HETATM 6 O O1 TRS . . . D 4 -10.931 25.599 72.004 1 27.38 ? O1 TRS 503 A 1 HETATM 7 O O2 TRS . . . D 4 -11.677 22.076 71.651 1 31.74 ? O2 TRS 503 A 1 HETATM 8 O O3 TRS . . . D 4 -14.107 23.959 74.714 1 25.23 ? O3 TRS 503 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #