data_8INJ # _model_server_result.job_id hqrfcIA6nDVkYDeNKMqtMg _model_server_result.datetime_utc '2024-11-29 09:51:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8inj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 8INJ # _exptl.entry_id 8INJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 374.514 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DIGITOXIGENIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8INJ _cell.length_a 45.718 _cell.length_b 52.21 _cell.length_c 201.48 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8INJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H34 O4' _chem_comp.formula_weight 374.514 _chem_comp.id DTX _chem_comp.mon_nstd_flag . _chem_comp.name DIGITOXIGENIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 4-(3,14-DIHYDROXY-10,13-DIMETHYL-HEXADECAHYDRO-CYCLOPENTA[A]PHENANTHREN-17-YL)-5H-FURAN-2-ONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O23 C23 DTX doub 83 n n C23 C22 DTX sing 84 n n C23 O21 DTX sing 85 n n C22 C20 DTX doub 86 n n C22 H22 DTX sing 87 n n O21 C21 DTX sing 88 n n C21 C20 DTX sing 89 n n C21 H211 DTX sing 90 n n C21 H212 DTX sing 91 n n C20 C17 DTX sing 92 n n C17 C16 DTX sing 93 n n C17 C13 DTX sing 94 n n C17 H17 DTX sing 95 n n C16 C15 DTX sing 96 n n C16 H161 DTX sing 97 n n C16 H162 DTX sing 98 n n C13 C12 DTX sing 99 n n C13 C18 DTX sing 100 n n C13 C14 DTX sing 101 n n C12 C11 DTX sing 102 n n C12 H121 DTX sing 103 n n C12 H122 DTX sing 104 n n C11 C9 DTX sing 105 n n C11 H111 DTX sing 106 n n C11 H112 DTX sing 107 n n C18 H181 DTX sing 108 n n C18 H182 DTX sing 109 n n C18 H183 DTX sing 110 n n C14 C15 DTX sing 111 n n C14 O14 DTX sing 112 n n C14 C8 DTX sing 113 n n C15 H151 DTX sing 114 n n C15 H152 DTX sing 115 n n O14 H14O DTX sing 116 n n C8 C7 DTX sing 117 n n C8 C9 DTX sing 118 n n C8 HC8 DTX sing 119 n n C7 C6 DTX sing 120 n n C7 HC71 DTX sing 121 n n C7 HC72 DTX sing 122 n n C9 C10 DTX sing 123 n n C9 HC9 DTX sing 124 n n C10 C1 DTX sing 125 n n C10 C19 DTX sing 126 n n C10 C5 DTX sing 127 n n C1 C2 DTX sing 128 n n C1 HC11 DTX sing 129 n n C1 HC12 DTX sing 130 n n C19 H191 DTX sing 131 n n C19 H192 DTX sing 132 n n C19 H193 DTX sing 133 n n C5 C6 DTX sing 134 n n C5 C4 DTX sing 135 n n C5 HC5 DTX sing 136 n n C6 HC61 DTX sing 137 n n C6 HC62 DTX sing 138 n n C4 C3 DTX sing 139 n n C4 HC41 DTX sing 140 n n C4 HC42 DTX sing 141 n n C3 C2 DTX sing 142 n n C3 O32 DTX sing 143 n n C3 HC3 DTX sing 144 n n C2 HC21 DTX sing 145 n n C2 HC22 DTX sing 146 n n O32 H32O DTX sing 147 n n # _atom_sites.entry_id 8INJ _atom_sites.fract_transf_matrix[1][1] 0.021873 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019153 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UDP A 1 501 502 UDP UDP . C 3 DTX A 1 502 503 DTX DRG . D 4 TRS A 1 503 504 TRS TRS . E 5 HOH A 1 601 164 HOH HOH . E 5 HOH A 2 602 206 HOH HOH . E 5 HOH A 3 603 38 HOH HOH . E 5 HOH A 4 604 142 HOH HOH . E 5 HOH A 5 605 208 HOH HOH . E 5 HOH A 6 606 93 HOH HOH . E 5 HOH A 7 607 59 HOH HOH . E 5 HOH A 8 608 77 HOH HOH . E 5 HOH A 9 609 178 HOH HOH . E 5 HOH A 10 610 242 HOH HOH . E 5 HOH A 11 611 29 HOH HOH . E 5 HOH A 12 612 10 HOH HOH . E 5 HOH A 13 613 41 HOH HOH . E 5 HOH A 14 614 20 HOH HOH . E 5 HOH A 15 615 100 HOH HOH . E 5 HOH A 16 616 21 HOH HOH . E 5 HOH A 17 617 192 HOH HOH . E 5 HOH A 18 618 39 HOH HOH . E 5 HOH A 19 619 232 HOH HOH . E 5 HOH A 20 620 6 HOH HOH . E 5 HOH A 21 621 149 HOH HOH . E 5 HOH A 22 622 18 HOH HOH . E 5 HOH A 23 623 5 HOH HOH . E 5 HOH A 24 624 137 HOH HOH . E 5 HOH A 25 625 1 HOH HOH . E 5 HOH A 26 626 8 HOH HOH . E 5 HOH A 27 627 30 HOH HOH . E 5 HOH A 28 628 2 HOH HOH . E 5 HOH A 29 629 3 HOH HOH . E 5 HOH A 30 630 94 HOH HOH . E 5 HOH A 31 631 79 HOH HOH . E 5 HOH A 32 632 205 HOH HOH . E 5 HOH A 33 633 4 HOH HOH . E 5 HOH A 34 634 51 HOH HOH . E 5 HOH A 35 635 121 HOH HOH . E 5 HOH A 36 636 233 HOH HOH . E 5 HOH A 37 637 154 HOH HOH . E 5 HOH A 38 638 23 HOH HOH . E 5 HOH A 39 639 146 HOH HOH . E 5 HOH A 40 640 57 HOH HOH . E 5 HOH A 41 641 106 HOH HOH . E 5 HOH A 42 642 7 HOH HOH . E 5 HOH A 43 643 33 HOH HOH . E 5 HOH A 44 644 46 HOH HOH . E 5 HOH A 45 645 48 HOH HOH . E 5 HOH A 46 646 19 HOH HOH . E 5 HOH A 47 647 85 HOH HOH . E 5 HOH A 48 648 31 HOH HOH . E 5 HOH A 49 649 16 HOH HOH . E 5 HOH A 50 650 32 HOH HOH . E 5 HOH A 51 651 172 HOH HOH . E 5 HOH A 52 652 42 HOH HOH . E 5 HOH A 53 653 107 HOH HOH . E 5 HOH A 54 654 246 HOH HOH . E 5 HOH A 55 655 43 HOH HOH . E 5 HOH A 56 656 220 HOH HOH . E 5 HOH A 57 657 97 HOH HOH . E 5 HOH A 58 658 165 HOH HOH . E 5 HOH A 59 659 99 HOH HOH . E 5 HOH A 60 660 49 HOH HOH . E 5 HOH A 61 661 81 HOH HOH . E 5 HOH A 62 662 102 HOH HOH . E 5 HOH A 63 663 54 HOH HOH . E 5 HOH A 64 664 80 HOH HOH . E 5 HOH A 65 665 56 HOH HOH . E 5 HOH A 66 666 118 HOH HOH . E 5 HOH A 67 667 17 HOH HOH . E 5 HOH A 68 668 114 HOH HOH . E 5 HOH A 69 669 67 HOH HOH . E 5 HOH A 70 670 28 HOH HOH . E 5 HOH A 71 671 9 HOH HOH . E 5 HOH A 72 672 65 HOH HOH . E 5 HOH A 73 673 159 HOH HOH . E 5 HOH A 74 674 58 HOH HOH . E 5 HOH A 75 675 130 HOH HOH . E 5 HOH A 76 676 139 HOH HOH . E 5 HOH A 77 677 184 HOH HOH . E 5 HOH A 78 678 72 HOH HOH . E 5 HOH A 79 679 15 HOH HOH . E 5 HOH A 80 680 36 HOH HOH . E 5 HOH A 81 681 14 HOH HOH . E 5 HOH A 82 682 176 HOH HOH . E 5 HOH A 83 683 201 HOH HOH . E 5 HOH A 84 684 122 HOH HOH . E 5 HOH A 85 685 214 HOH HOH . E 5 HOH A 86 686 62 HOH HOH . E 5 HOH A 87 687 230 HOH HOH . E 5 HOH A 88 688 35 HOH HOH . E 5 HOH A 89 689 91 HOH HOH . E 5 HOH A 90 690 131 HOH HOH . E 5 HOH A 91 691 148 HOH HOH . E 5 HOH A 92 692 27 HOH HOH . E 5 HOH A 93 693 183 HOH HOH . E 5 HOH A 94 694 175 HOH HOH . E 5 HOH A 95 695 112 HOH HOH . E 5 HOH A 96 696 98 HOH HOH . E 5 HOH A 97 697 90 HOH HOH . E 5 HOH A 98 698 73 HOH HOH . E 5 HOH A 99 699 239 HOH HOH . E 5 HOH A 100 700 61 HOH HOH . E 5 HOH A 101 701 179 HOH HOH . E 5 HOH A 102 702 157 HOH HOH . E 5 HOH A 103 703 84 HOH HOH . E 5 HOH A 104 704 11 HOH HOH . E 5 HOH A 105 705 26 HOH HOH . E 5 HOH A 106 706 89 HOH HOH . E 5 HOH A 107 707 167 HOH HOH . E 5 HOH A 108 708 116 HOH HOH . E 5 HOH A 109 709 74 HOH HOH . E 5 HOH A 110 710 95 HOH HOH . E 5 HOH A 111 711 34 HOH HOH . E 5 HOH A 112 712 12 HOH HOH . E 5 HOH A 113 713 69 HOH HOH . E 5 HOH A 114 714 195 HOH HOH . E 5 HOH A 115 715 152 HOH HOH . E 5 HOH A 116 716 134 HOH HOH . E 5 HOH A 117 717 231 HOH HOH . E 5 HOH A 118 718 50 HOH HOH . E 5 HOH A 119 719 105 HOH HOH . E 5 HOH A 120 720 87 HOH HOH . E 5 HOH A 121 721 76 HOH HOH . E 5 HOH A 122 722 126 HOH HOH . E 5 HOH A 123 723 103 HOH HOH . E 5 HOH A 124 724 75 HOH HOH . E 5 HOH A 125 725 78 HOH HOH . E 5 HOH A 126 726 60 HOH HOH . E 5 HOH A 127 727 171 HOH HOH . E 5 HOH A 128 728 194 HOH HOH . E 5 HOH A 129 729 197 HOH HOH . E 5 HOH A 130 730 243 HOH HOH . E 5 HOH A 131 731 92 HOH HOH . E 5 HOH A 132 732 110 HOH HOH . E 5 HOH A 133 733 104 HOH HOH . E 5 HOH A 134 734 64 HOH HOH . E 5 HOH A 135 735 13 HOH HOH . E 5 HOH A 136 736 52 HOH HOH . E 5 HOH A 137 737 143 HOH HOH . E 5 HOH A 138 738 207 HOH HOH . E 5 HOH A 139 739 140 HOH HOH . E 5 HOH A 140 740 202 HOH HOH . E 5 HOH A 141 741 45 HOH HOH . E 5 HOH A 142 742 216 HOH HOH . E 5 HOH A 143 743 153 HOH HOH . E 5 HOH A 144 744 113 HOH HOH . E 5 HOH A 145 745 150 HOH HOH . E 5 HOH A 146 746 225 HOH HOH . E 5 HOH A 147 747 161 HOH HOH . E 5 HOH A 148 748 173 HOH HOH . E 5 HOH A 149 749 55 HOH HOH . E 5 HOH A 150 750 227 HOH HOH . E 5 HOH A 151 751 209 HOH HOH . E 5 HOH A 152 752 187 HOH HOH . E 5 HOH A 153 753 22 HOH HOH . E 5 HOH A 154 754 119 HOH HOH . E 5 HOH A 155 755 141 HOH HOH . E 5 HOH A 156 756 86 HOH HOH . E 5 HOH A 157 757 123 HOH HOH . E 5 HOH A 158 758 177 HOH HOH . E 5 HOH A 159 759 191 HOH HOH . E 5 HOH A 160 760 224 HOH HOH . E 5 HOH A 161 761 235 HOH HOH . E 5 HOH A 162 762 245 HOH HOH . E 5 HOH A 163 763 221 HOH HOH . E 5 HOH A 164 764 37 HOH HOH . E 5 HOH A 165 765 108 HOH HOH . E 5 HOH A 166 766 158 HOH HOH . E 5 HOH A 167 767 210 HOH HOH . E 5 HOH A 168 768 190 HOH HOH . E 5 HOH A 169 769 203 HOH HOH . E 5 HOH A 170 770 211 HOH HOH . E 5 HOH A 171 771 181 HOH HOH . E 5 HOH A 172 772 82 HOH HOH . E 5 HOH A 173 773 170 HOH HOH . E 5 HOH A 174 774 212 HOH HOH . E 5 HOH A 175 775 168 HOH HOH . E 5 HOH A 176 776 241 HOH HOH . E 5 HOH A 177 777 196 HOH HOH . E 5 HOH A 178 778 244 HOH HOH . E 5 HOH A 179 779 151 HOH HOH . E 5 HOH A 180 780 236 HOH HOH . E 5 HOH A 181 781 217 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O23 DTX . . . C 3 -14.837 24.505 68.619 1 45.31 ? O23 DTX 502 A 1 HETATM 2 C C23 DTX . . . C 3 -13.839 25.138 68.383 1 40.96 ? C23 DTX 502 A 1 HETATM 3 C C22 DTX . . . C 3 -13.197 26.204 69.139 1 39.54 ? C22 DTX 502 A 1 HETATM 4 O O21 DTX . . . C 3 -13.128 24.91 67.255 1 39.43 ? O21 DTX 502 A 1 HETATM 5 C C21 DTX . . . C 3 -11.96 25.765 67.269 1 40.88 ? C21 DTX 502 A 1 HETATM 6 C C20 DTX . . . C 3 -12.053 26.534 68.552 1 38.94 ? C20 DTX 502 A 1 HETATM 7 C C17 DTX . . . C 3 -11.019 27.492 69.064 1 39.41 ? C17 DTX 502 A 1 HETATM 8 C C16 DTX . . . C 3 -9.554 27.095 68.776 1 39.89 ? C16 DTX 502 A 1 HETATM 9 C C13 DTX . . . C 3 -11.14 28.991 68.63 1 39.45 ? C13 DTX 502 A 1 HETATM 10 C C12 DTX . . . C 3 -11.502 29.741 69.925 1 38.49 ? C12 DTX 502 A 1 HETATM 11 C C11 DTX . . . C 3 -11.198 31.232 69.882 1 39.7 ? C11 DTX 502 A 1 HETATM 12 C C18 DTX . . . C 3 -12.194 29.258 67.561 1 39.13 ? C18 DTX 502 A 1 HETATM 13 C C14 DTX . . . C 3 -9.704 29.385 68.164 1 39.29 ? C14 DTX 502 A 1 HETATM 14 C C15 DTX . . . C 3 -8.803 28.422 68.94 1 41.86 ? C15 DTX 502 A 1 HETATM 15 O O14 DTX . . . C 3 -9.576 28.964 66.785 1 44.69 ? O14 DTX 502 A 1 HETATM 16 C C8 DTX . . . C 3 -9.352 30.881 68.238 1 39.4 ? C8 DTX 502 A 1 HETATM 17 C C7 DTX . . . C 3 -7.881 31.139 67.89 1 40.45 ? C7 DTX 502 A 1 HETATM 18 C C9 DTX . . . C 3 -9.719 31.519 69.595 1 39.55 ? C9 DTX 502 A 1 HETATM 19 C C10 DTX . . . C 3 -9.347 33.03 69.682 1 39.62 ? C10 DTX 502 A 1 HETATM 20 C C1 DTX . . . C 3 -9.56 33.568 71.111 1 42.31 ? C1 DTX 502 A 1 HETATM 21 C C19 DTX . . . C 3 -10.218 33.864 68.72 1 41.72 ? C19 DTX 502 A 1 HETATM 22 C C5 DTX . . . C 3 -7.845 33.202 69.327 1 41.43 ? C5 DTX 502 A 1 HETATM 23 C C6 DTX . . . C 3 -7.533 32.626 67.948 1 41.01 ? C6 DTX 502 A 1 HETATM 24 C C4 DTX . . . C 3 -6.909 32.622 70.393 1 40.51 ? C4 DTX 502 A 1 HETATM 25 C C3 DTX . . . C 3 -7.186 33.145 71.788 1 42.4 ? C3 DTX 502 A 1 HETATM 26 C C2 DTX . . . C 3 -8.639 32.925 72.144 1 40.81 ? C2 DTX 502 A 1 HETATM 27 O O32 DTX . . . C 3 -6.891 34.554 71.853 1 46.38 ? O32 DTX 502 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 69 _model_server_stats.element_count 27 #