data_8INJ # _model_server_result.job_id eaD6UX7YLPUOCERXTQ2omQ _model_server_result.datetime_utc '2024-11-29 09:07:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8inj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 8INJ # _exptl.entry_id 8INJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8INJ _cell.length_a 45.718 _cell.length_b 52.21 _cell.length_c 201.48 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8INJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 399 n n C C2 TRS sing 400 n n C C3 TRS sing 401 n n C N TRS sing 402 n n C1 O1 TRS sing 403 n n C1 H11 TRS sing 404 n n C1 H12 TRS sing 405 n n C2 O2 TRS sing 406 n n C2 H21 TRS sing 407 n n C2 H22 TRS sing 408 n n C3 O3 TRS sing 409 n n C3 H31 TRS sing 410 n n C3 H32 TRS sing 411 n n N HN1 TRS sing 412 n n N HN2 TRS sing 413 n n N HN3 TRS sing 414 n n O1 HO1 TRS sing 415 n n O2 HO2 TRS sing 416 n n O3 HO3 TRS sing 417 n n # _atom_sites.entry_id 8INJ _atom_sites.fract_transf_matrix[1][1] 0.021873 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019153 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UDP A 1 501 502 UDP UDP . C 3 DTX A 1 502 503 DTX DRG . D 4 TRS A 1 503 504 TRS TRS . E 5 HOH A 1 601 164 HOH HOH . E 5 HOH A 2 602 206 HOH HOH . E 5 HOH A 3 603 38 HOH HOH . E 5 HOH A 4 604 142 HOH HOH . E 5 HOH A 5 605 208 HOH HOH . E 5 HOH A 6 606 93 HOH HOH . E 5 HOH A 7 607 59 HOH HOH . E 5 HOH A 8 608 77 HOH HOH . E 5 HOH A 9 609 178 HOH HOH . E 5 HOH A 10 610 242 HOH HOH . E 5 HOH A 11 611 29 HOH HOH . E 5 HOH A 12 612 10 HOH HOH . E 5 HOH A 13 613 41 HOH HOH . E 5 HOH A 14 614 20 HOH HOH . E 5 HOH A 15 615 100 HOH HOH . E 5 HOH A 16 616 21 HOH HOH . E 5 HOH A 17 617 192 HOH HOH . E 5 HOH A 18 618 39 HOH HOH . E 5 HOH A 19 619 232 HOH HOH . E 5 HOH A 20 620 6 HOH HOH . E 5 HOH A 21 621 149 HOH HOH . E 5 HOH A 22 622 18 HOH HOH . E 5 HOH A 23 623 5 HOH HOH . E 5 HOH A 24 624 137 HOH HOH . E 5 HOH A 25 625 1 HOH HOH . E 5 HOH A 26 626 8 HOH HOH . E 5 HOH A 27 627 30 HOH HOH . E 5 HOH A 28 628 2 HOH HOH . E 5 HOH A 29 629 3 HOH HOH . E 5 HOH A 30 630 94 HOH HOH . E 5 HOH A 31 631 79 HOH HOH . E 5 HOH A 32 632 205 HOH HOH . E 5 HOH A 33 633 4 HOH HOH . E 5 HOH A 34 634 51 HOH HOH . E 5 HOH A 35 635 121 HOH HOH . E 5 HOH A 36 636 233 HOH HOH . E 5 HOH A 37 637 154 HOH HOH . E 5 HOH A 38 638 23 HOH HOH . E 5 HOH A 39 639 146 HOH HOH . E 5 HOH A 40 640 57 HOH HOH . E 5 HOH A 41 641 106 HOH HOH . E 5 HOH A 42 642 7 HOH HOH . E 5 HOH A 43 643 33 HOH HOH . E 5 HOH A 44 644 46 HOH HOH . E 5 HOH A 45 645 48 HOH HOH . E 5 HOH A 46 646 19 HOH HOH . E 5 HOH A 47 647 85 HOH HOH . E 5 HOH A 48 648 31 HOH HOH . E 5 HOH A 49 649 16 HOH HOH . E 5 HOH A 50 650 32 HOH HOH . E 5 HOH A 51 651 172 HOH HOH . E 5 HOH A 52 652 42 HOH HOH . E 5 HOH A 53 653 107 HOH HOH . E 5 HOH A 54 654 246 HOH HOH . E 5 HOH A 55 655 43 HOH HOH . E 5 HOH A 56 656 220 HOH HOH . E 5 HOH A 57 657 97 HOH HOH . E 5 HOH A 58 658 165 HOH HOH . E 5 HOH A 59 659 99 HOH HOH . E 5 HOH A 60 660 49 HOH HOH . E 5 HOH A 61 661 81 HOH HOH . E 5 HOH A 62 662 102 HOH HOH . E 5 HOH A 63 663 54 HOH HOH . E 5 HOH A 64 664 80 HOH HOH . E 5 HOH A 65 665 56 HOH HOH . E 5 HOH A 66 666 118 HOH HOH . E 5 HOH A 67 667 17 HOH HOH . E 5 HOH A 68 668 114 HOH HOH . E 5 HOH A 69 669 67 HOH HOH . E 5 HOH A 70 670 28 HOH HOH . E 5 HOH A 71 671 9 HOH HOH . E 5 HOH A 72 672 65 HOH HOH . E 5 HOH A 73 673 159 HOH HOH . E 5 HOH A 74 674 58 HOH HOH . E 5 HOH A 75 675 130 HOH HOH . E 5 HOH A 76 676 139 HOH HOH . E 5 HOH A 77 677 184 HOH HOH . E 5 HOH A 78 678 72 HOH HOH . E 5 HOH A 79 679 15 HOH HOH . E 5 HOH A 80 680 36 HOH HOH . E 5 HOH A 81 681 14 HOH HOH . E 5 HOH A 82 682 176 HOH HOH . E 5 HOH A 83 683 201 HOH HOH . E 5 HOH A 84 684 122 HOH HOH . E 5 HOH A 85 685 214 HOH HOH . E 5 HOH A 86 686 62 HOH HOH . E 5 HOH A 87 687 230 HOH HOH . E 5 HOH A 88 688 35 HOH HOH . E 5 HOH A 89 689 91 HOH HOH . E 5 HOH A 90 690 131 HOH HOH . E 5 HOH A 91 691 148 HOH HOH . E 5 HOH A 92 692 27 HOH HOH . E 5 HOH A 93 693 183 HOH HOH . E 5 HOH A 94 694 175 HOH HOH . E 5 HOH A 95 695 112 HOH HOH . E 5 HOH A 96 696 98 HOH HOH . E 5 HOH A 97 697 90 HOH HOH . E 5 HOH A 98 698 73 HOH HOH . E 5 HOH A 99 699 239 HOH HOH . E 5 HOH A 100 700 61 HOH HOH . E 5 HOH A 101 701 179 HOH HOH . E 5 HOH A 102 702 157 HOH HOH . E 5 HOH A 103 703 84 HOH HOH . E 5 HOH A 104 704 11 HOH HOH . E 5 HOH A 105 705 26 HOH HOH . E 5 HOH A 106 706 89 HOH HOH . E 5 HOH A 107 707 167 HOH HOH . E 5 HOH A 108 708 116 HOH HOH . E 5 HOH A 109 709 74 HOH HOH . E 5 HOH A 110 710 95 HOH HOH . E 5 HOH A 111 711 34 HOH HOH . E 5 HOH A 112 712 12 HOH HOH . E 5 HOH A 113 713 69 HOH HOH . E 5 HOH A 114 714 195 HOH HOH . E 5 HOH A 115 715 152 HOH HOH . E 5 HOH A 116 716 134 HOH HOH . E 5 HOH A 117 717 231 HOH HOH . E 5 HOH A 118 718 50 HOH HOH . E 5 HOH A 119 719 105 HOH HOH . E 5 HOH A 120 720 87 HOH HOH . E 5 HOH A 121 721 76 HOH HOH . E 5 HOH A 122 722 126 HOH HOH . E 5 HOH A 123 723 103 HOH HOH . E 5 HOH A 124 724 75 HOH HOH . E 5 HOH A 125 725 78 HOH HOH . E 5 HOH A 126 726 60 HOH HOH . E 5 HOH A 127 727 171 HOH HOH . E 5 HOH A 128 728 194 HOH HOH . E 5 HOH A 129 729 197 HOH HOH . E 5 HOH A 130 730 243 HOH HOH . E 5 HOH A 131 731 92 HOH HOH . E 5 HOH A 132 732 110 HOH HOH . E 5 HOH A 133 733 104 HOH HOH . E 5 HOH A 134 734 64 HOH HOH . E 5 HOH A 135 735 13 HOH HOH . E 5 HOH A 136 736 52 HOH HOH . E 5 HOH A 137 737 143 HOH HOH . E 5 HOH A 138 738 207 HOH HOH . E 5 HOH A 139 739 140 HOH HOH . E 5 HOH A 140 740 202 HOH HOH . E 5 HOH A 141 741 45 HOH HOH . E 5 HOH A 142 742 216 HOH HOH . E 5 HOH A 143 743 153 HOH HOH . E 5 HOH A 144 744 113 HOH HOH . E 5 HOH A 145 745 150 HOH HOH . E 5 HOH A 146 746 225 HOH HOH . E 5 HOH A 147 747 161 HOH HOH . E 5 HOH A 148 748 173 HOH HOH . E 5 HOH A 149 749 55 HOH HOH . E 5 HOH A 150 750 227 HOH HOH . E 5 HOH A 151 751 209 HOH HOH . E 5 HOH A 152 752 187 HOH HOH . E 5 HOH A 153 753 22 HOH HOH . E 5 HOH A 154 754 119 HOH HOH . E 5 HOH A 155 755 141 HOH HOH . E 5 HOH A 156 756 86 HOH HOH . E 5 HOH A 157 757 123 HOH HOH . E 5 HOH A 158 758 177 HOH HOH . E 5 HOH A 159 759 191 HOH HOH . E 5 HOH A 160 760 224 HOH HOH . E 5 HOH A 161 761 235 HOH HOH . E 5 HOH A 162 762 245 HOH HOH . E 5 HOH A 163 763 221 HOH HOH . E 5 HOH A 164 764 37 HOH HOH . E 5 HOH A 165 765 108 HOH HOH . E 5 HOH A 166 766 158 HOH HOH . E 5 HOH A 167 767 210 HOH HOH . E 5 HOH A 168 768 190 HOH HOH . E 5 HOH A 169 769 203 HOH HOH . E 5 HOH A 170 770 211 HOH HOH . E 5 HOH A 171 771 181 HOH HOH . E 5 HOH A 172 772 82 HOH HOH . E 5 HOH A 173 773 170 HOH HOH . E 5 HOH A 174 774 212 HOH HOH . E 5 HOH A 175 775 168 HOH HOH . E 5 HOH A 176 776 241 HOH HOH . E 5 HOH A 177 777 196 HOH HOH . E 5 HOH A 178 778 244 HOH HOH . E 5 HOH A 179 779 151 HOH HOH . E 5 HOH A 180 780 236 HOH HOH . E 5 HOH A 181 781 217 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 4 -12.55 23.092 73.028 1 30.11 ? C TRS 503 A 1 HETATM 2 C C1 TRS . . . D 4 -12.643 24.279 72.066 1 33.38 ? C1 TRS 503 A 1 HETATM 3 C C2 TRS . . . D 4 -13.954 22.594 73.381 1 30.62 ? C2 TRS 503 A 1 HETATM 4 C C3 TRS . . . D 4 -11.797 21.946 72.348 1 29.73 ? C3 TRS 503 A 1 HETATM 5 N N TRS . . . D 4 -11.829 23.474 74.258 1 28.78 ? N TRS 503 A 1 HETATM 6 O O1 TRS . . . D 4 -11.362 24.843 71.824 1 33.94 ? O1 TRS 503 A 1 HETATM 7 O O2 TRS . . . D 4 -14.418 23.159 74.598 1 29.06 ? O2 TRS 503 A 1 HETATM 8 O O3 TRS . . . D 4 -11.781 20.816 73.208 1 33.82 ? O3 TRS 503 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 8 #