data_8INO # _model_server_result.job_id Mwm53qLXRUDCtuPtWkQNVA _model_server_result.datetime_utc '2025-08-24 09:02:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ino # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 8INO # _exptl.entry_id 8INO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8INO _cell.length_a 45.608 _cell.length_b 52.2 _cell.length_c 200.701 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8INO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 400 n n C C2 TRS sing 401 n n C C3 TRS sing 402 n n C N TRS sing 403 n n C1 O1 TRS sing 404 n n C1 H11 TRS sing 405 n n C1 H12 TRS sing 406 n n C2 O2 TRS sing 407 n n C2 H21 TRS sing 408 n n C2 H22 TRS sing 409 n n C3 O3 TRS sing 410 n n C3 H31 TRS sing 411 n n C3 H32 TRS sing 412 n n N HN1 TRS sing 413 n n N HN2 TRS sing 414 n n N HN3 TRS sing 415 n n O1 HO1 TRS sing 416 n n O2 HO2 TRS sing 417 n n O3 HO3 TRS sing 418 n n # _atom_sites.entry_id 8INO _atom_sites.fract_transf_matrix[1][1] 0.021926 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004983 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q30 A 1 501 501 Q30 PEG . C 3 UDP A 1 502 502 UDP UDP . D 4 TRS A 1 503 503 TRS TRS . E 5 HOH A 1 601 42 HOH HOH . E 5 HOH A 2 602 77 HOH HOH . E 5 HOH A 3 603 65 HOH HOH . E 5 HOH A 4 604 63 HOH HOH . E 5 HOH A 5 605 50 HOH HOH . E 5 HOH A 6 606 35 HOH HOH . E 5 HOH A 7 607 69 HOH HOH . E 5 HOH A 8 608 59 HOH HOH . E 5 HOH A 9 609 44 HOH HOH . E 5 HOH A 10 610 78 HOH HOH . E 5 HOH A 11 611 43 HOH HOH . E 5 HOH A 12 612 106 HOH HOH . E 5 HOH A 13 613 3 HOH HOH . E 5 HOH A 14 614 112 HOH HOH . E 5 HOH A 15 615 80 HOH HOH . E 5 HOH A 16 616 12 HOH HOH . E 5 HOH A 17 617 37 HOH HOH . E 5 HOH A 18 618 68 HOH HOH . E 5 HOH A 19 619 36 HOH HOH . E 5 HOH A 20 620 120 HOH HOH . E 5 HOH A 21 621 71 HOH HOH . E 5 HOH A 22 622 1 HOH HOH . E 5 HOH A 23 623 70 HOH HOH . E 5 HOH A 24 624 13 HOH HOH . E 5 HOH A 25 625 10 HOH HOH . E 5 HOH A 26 626 66 HOH HOH . E 5 HOH A 27 627 2 HOH HOH . E 5 HOH A 28 628 110 HOH HOH . E 5 HOH A 29 629 9 HOH HOH . E 5 HOH A 30 630 90 HOH HOH . E 5 HOH A 31 631 24 HOH HOH . E 5 HOH A 32 632 113 HOH HOH . E 5 HOH A 33 633 60 HOH HOH . E 5 HOH A 34 634 14 HOH HOH . E 5 HOH A 35 635 11 HOH HOH . E 5 HOH A 36 636 38 HOH HOH . E 5 HOH A 37 637 8 HOH HOH . E 5 HOH A 38 638 56 HOH HOH . E 5 HOH A 39 639 31 HOH HOH . E 5 HOH A 40 640 28 HOH HOH . E 5 HOH A 41 641 54 HOH HOH . E 5 HOH A 42 642 26 HOH HOH . E 5 HOH A 43 643 73 HOH HOH . E 5 HOH A 44 644 119 HOH HOH . E 5 HOH A 45 645 108 HOH HOH . E 5 HOH A 46 646 20 HOH HOH . E 5 HOH A 47 647 19 HOH HOH . E 5 HOH A 48 648 6 HOH HOH . E 5 HOH A 49 649 23 HOH HOH . E 5 HOH A 50 650 86 HOH HOH . E 5 HOH A 51 651 57 HOH HOH . E 5 HOH A 52 652 5 HOH HOH . E 5 HOH A 53 653 72 HOH HOH . E 5 HOH A 54 654 87 HOH HOH . E 5 HOH A 55 655 117 HOH HOH . E 5 HOH A 56 656 75 HOH HOH . E 5 HOH A 57 657 67 HOH HOH . E 5 HOH A 58 658 64 HOH HOH . E 5 HOH A 59 659 22 HOH HOH . E 5 HOH A 60 660 32 HOH HOH . E 5 HOH A 61 661 30 HOH HOH . E 5 HOH A 62 662 4 HOH HOH . E 5 HOH A 63 663 105 HOH HOH . E 5 HOH A 64 664 15 HOH HOH . E 5 HOH A 65 665 34 HOH HOH . E 5 HOH A 66 666 53 HOH HOH . E 5 HOH A 67 667 7 HOH HOH . E 5 HOH A 68 668 52 HOH HOH . E 5 HOH A 69 669 18 HOH HOH . E 5 HOH A 70 670 85 HOH HOH . E 5 HOH A 71 671 102 HOH HOH . E 5 HOH A 72 672 107 HOH HOH . E 5 HOH A 73 673 29 HOH HOH . E 5 HOH A 74 674 55 HOH HOH . E 5 HOH A 75 675 116 HOH HOH . E 5 HOH A 76 676 21 HOH HOH . E 5 HOH A 77 677 58 HOH HOH . E 5 HOH A 78 678 115 HOH HOH . E 5 HOH A 79 679 41 HOH HOH . E 5 HOH A 80 680 61 HOH HOH . E 5 HOH A 81 681 45 HOH HOH . E 5 HOH A 82 682 88 HOH HOH . E 5 HOH A 83 683 46 HOH HOH . E 5 HOH A 84 684 92 HOH HOH . E 5 HOH A 85 685 16 HOH HOH . E 5 HOH A 86 686 39 HOH HOH . E 5 HOH A 87 687 48 HOH HOH . E 5 HOH A 88 688 17 HOH HOH . E 5 HOH A 89 689 47 HOH HOH . E 5 HOH A 90 690 118 HOH HOH . E 5 HOH A 91 691 76 HOH HOH . E 5 HOH A 92 692 40 HOH HOH . E 5 HOH A 93 693 27 HOH HOH . E 5 HOH A 94 694 100 HOH HOH . E 5 HOH A 95 695 81 HOH HOH . E 5 HOH A 96 696 111 HOH HOH . E 5 HOH A 97 697 51 HOH HOH . E 5 HOH A 98 698 97 HOH HOH . E 5 HOH A 99 699 104 HOH HOH . E 5 HOH A 100 700 84 HOH HOH . E 5 HOH A 101 701 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 4 -12.481 23.34 73.011 1 33.15 ? C TRS 503 A 1 HETATM 2 C C1 TRS . . . D 4 -12.919 24.389 71.987 1 38.64 ? C1 TRS 503 A 1 HETATM 3 C C2 TRS . . . D 4 -13.705 22.576 73.518 1 30.65 ? C2 TRS 503 A 1 HETATM 4 C C3 TRS . . . D 4 -11.542 22.35 72.326 1 31.62 ? C3 TRS 503 A 1 HETATM 5 N N TRS . . . D 4 -11.72 23.978 74.1 1 31.46 ? N TRS 503 A 1 HETATM 6 O O1 TRS . . . D 4 -11.784 25.072 71.473 1 47.7 ? O1 TRS 503 A 1 HETATM 7 O O2 TRS . . . D 4 -14.556 23.407 74.286 1 30.05 ? O2 TRS 503 A 1 HETATM 8 O O3 TRS . . . D 4 -12.289 21.311 71.721 1 33.4 ? O3 TRS 503 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #